SRR6503040_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6503040_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	155679833
Sequences flagged as poor quality	0
Sequence length	150
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	4804341	3.086039410127065	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	1506125	0.9674502926785643	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	1080065	0.6937732262341263	No Hit
AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	688777	0.44243174387269546	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC	309018	0.19849584499490053	No Hit
CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG	220404	0.1415751775633007	Illumina Single End PCR Primer 1 (100% over 22bp)
GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC	174848	0.1123125562448413	No Hit
AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	165360	0.10621799677804125	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAGCGA	588245	143.37111	1
TAGCGAC	586230	142.30812	2
ATGCCTA	249825	140.75024	1
AGCGACT	284920	139.69742	3
GTGACTG	579015	139.60648	7
CATCGGT	1066375	139.21	2
GGTGACT	621025	139.03816	6
TCACGCA	282085	139.0046	2
ATCGGTG	1034520	138.89703	3
CAAGCTA	234715	138.84523	2
TCGGTGA	856525	138.78194	4
TGACTGG	594050	138.70065	8
ACAAGCT	237850	138.17613	1
CGGTGAC	951695	138.1202	5
TATCAGC	170550	137.89471	1
ATCATTC	354835	137.72726	1
ATTGGCT	492420	137.50543	1
AACGTGA	219990	137.33081	1
TGCCTAA	255520	137.0484	2
ACGTGAT	219840	137.01164	2