SRR6503037_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6503037_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	114861408
Sequences flagged as poor quality	0
Sequence length	150
%GC	30

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	3643340	3.171944401029805	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	862054	0.7505166574311887	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	844109	0.7348934813684331	No Hit
AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	394946	0.34384568923271425	No Hit
CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	390755	0.3401969441293981	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA	150716	0.131215525409544	Illumina Single End PCR Primer 1 (100% over 21bp)
CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA	142480	0.12404514491063873	No Hit
GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC	133363	0.11610775309318863	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC	116904	0.10177831008305245	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAGCGA	250405	144.62395	1
GATAGAC	176465	143.53648	1
TATCAGC	244700	143.47568	1
TAGCGAC	254980	142.39125	2
ATGAATC	405380	142.34355	2
AGGCTAA	423880	141.64507	1
CAGATTC	347410	141.42627	2
GGCTAAC	426830	141.29854	2
AGTTAGC	181640	141.19246	2
TTCACGC	224045	141.08116	1
ACAGTGC	322995	141.04259	2
AGCACCT	164325	140.8654	1
TGGAACA	315720	140.85802	1
ATCCGTC	202595	140.82207	2
ATCAGCA	249300	140.80482	2
GCTAACT	213490	140.68738	3
TCACGCA	224705	140.55806	2
AGCGACT	124570	140.21927	3
ATAGACA	180995	139.78264	2
GCCACAT	196770	139.62556	1