SRR6502999_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6502999_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	104479530
Sequences flagged as poor quality	0
Sequence length	150
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	1908499	1.8266726506139526	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT	551035	0.5274095318001526	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	537568	0.5145199255777663	No Hit
CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT	269235	0.2576916262927293	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC	235080	0.2250010121599896	No Hit
CATGTACTCTGCGTTGATACGACTGCTTCCCATGTACTCTGCGTTGATAC	232904	0.22291830753832834	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTACCATGTACT	201192	0.19256595047852915	No Hit
AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	179882	0.17216961064047664	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCGCATGTACTCTGCGTTGATAC	161933	0.15499016888762804	No Hit
CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG	116150	0.1111701019328858	Illumina Single End PCR Primer 1 (100% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CAAGACT	479490	144.1571	1
CTCAATG	260380	142.59195	1
AAGACTA	491175	142.31236	2
ATGCCTA	158115	141.40495	1
AGACTAT	254955	140.82906	3
CAATGGA	381610	140.7178	1
TGCCTAA	158415	140.69214	2
AGACTAA	172305	140.3264	3
CAAGCTA	109935	139.71657	2
AGAGTCA	128610	139.49814	1
ACAAGCT	110630	139.09694	1
GAGTCAA	128410	138.80084	2
CGAACTT	66085	138.69836	1
GACTAAT	88590	138.22714	4
TCAATGA	273275	138.02802	2
AAGGTAC	150910	138.01715	1
ACGCTTA	126755	138.00148	2
ATGTGAC	455115	137.86464	5
CATCAAG	59130	137.7079	1
ACTTCGA	121770	137.50311	2