SRR6502989_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6502989_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	104617417
Sequences flagged as poor quality	0
Sequence length	150
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	2320136	2.2177339744490157	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	1321740	1.263403396778569	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT	568608	0.5435117940256544	No Hit
AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	216204	0.2066615733783601	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC	166789	0.15942756453258639	No Hit
CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT	144601	0.13821885891141816	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	134584	0.12864397139531747	No Hit
CTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTT	128194	0.1225360018208058	No Hit
CATGTACTCTGCGTTGATACGACTGCTTCCCATGTACTCTGCGTTGATAC	126511	0.12092728307371611	No Hit
CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG	121938	0.11655611799324006	Illumina Single End PCR Primer 1 (100% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CACTGTG	1647870	142.39394	1
CTCAATG	352130	142.15678	1
TGTGACT	1235530	142.11958	6
GTGTGAC	1472020	142.1176	5
GTGACTG	1113890	142.06729	7
AGAGTCA	205765	142.00494	1
TGACTGG	1078970	141.79892	8
ACTGTGT	1781455	141.6321	2
AGTCACT	173970	141.57007	1
TGTGTGA	1492550	141.41313	4
CAATGGA	656880	140.5838	1
CTGTGTG	1735595	139.20929	3
GAGTCAA	208780	139.07458	2
AGTCAAT	119905	138.73665	3
TCAATGA	358900	138.12962	2
ACAAGCT	131235	137.95464	1
CAAGCTA	130355	137.87117	2
ATGCCTA	67325	137.39314	1
CATCAAG	86940	137.2494	1
GTCACTA	178650	137.12617	2