SRR6502982_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6502982_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	94949661
Sequences flagged as poor quality	0
Sequence length	150
%GC	32

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	3239973	3.4123060218192878	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	645063	0.6793736735932105	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	496467	0.5228739047314767	No Hit
CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	363168	0.3824847779077379	No Hit
AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	348783	0.36733464482827377	No Hit
GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC	225559	0.2375564037032212	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC	157054	0.16540764690039284	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA	143265	0.15088521485084608	Illumina Single End PCR Primer 1 (100% over 21bp)
ATCATTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC	116861	0.12307679539793195	No Hit
ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC	104542	0.11010255213022824	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAGCGA	170670	141.75168	1
TATCAGC	250465	141.42601	1
TAGCGAC	170855	141.33725	2
GATAGAC	168335	141.31288	1
AGTTAGC	193855	140.7379	2
TCTGTCA	387135	140.45097	2
GTCTGTC	387890	140.18315	1
ATCAGCA	251340	140.09535	2
GCGAGTA	212190	140.03162	1
TGGAACA	399500	140.00085	1
AGGCTAA	222580	139.99524	1
GTCGTAG	142070	139.48268	1
GGCTAAC	223000	139.4478	2
ATAGACA	170870	139.35106	2
CTGTCAT	196965	139.28603	3
ATGAATC	115280	139.23563	2
GCTAACT	113920	139.20615	3
CGAGTAA	212485	139.16713	2
CCACATA	368935	138.90282	2
ATCATTC	217330	138.68188	1