Basic Statistics
Measure | Value |
---|---|
Filename | SRR7403976_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 53526963 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 354931 | 0.6630882458248192 | No Hit |
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 93614 | 0.1748912973074897 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 1572035 | 0.0 | 139.25673 | 1 |
GGTATCA | 1700030 | 0.0 | 137.48248 | 8 |
GTATCAA | 1859740 | 0.0 | 137.47842 | 9 |
TGGTATC | 1701195 | 0.0 | 137.46707 | 7 |
GTGGTAT | 1703495 | 0.0 | 137.45476 | 6 |
AGCAGTG | 1670210 | 0.0 | 136.94908 | 2 |
CAGTGGT | 1724475 | 0.0 | 136.24384 | 4 |
AGTGGTA | 1770945 | 0.0 | 132.57567 | 5 |
GCAGTGG | 1736685 | 0.0 | 131.66457 | 3 |
TAGTATC | 89770 | 0.0 | 124.8074 | 7 |
GTCGTAT | 22110 | 0.0 | 124.429214 | 6 |
TCGTATC | 23365 | 0.0 | 118.14638 | 7 |
CAGCAGT | 238775 | 0.0 | 116.14497 | 1 |
CAGTAGT | 98110 | 0.0 | 115.38682 | 4 |
GCAGTAG | 94275 | 0.0 | 113.398026 | 3 |
CGTATCA | 24300 | 0.0 | 113.24379 | 8 |
GTAGTAT | 99245 | 0.0 | 112.8847 | 6 |
AGTAGTA | 100595 | 0.0 | 112.50063 | 5 |
AGTATCA | 101000 | 0.0 | 110.99342 | 8 |
GCAGTCG | 25340 | 0.0 | 103.42579 | 3 |