SRR6211800_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6211800_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	61837727
Sequences flagged as poor quality	0
Sequence length	151
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	294293	0.47591173588899865	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	229502	0.37113589249488427	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	199936	0.32332365644681604	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	184530	0.2984100628407639	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	147905	0.23918246542276694	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT	133771	0.21632586851065855	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA	126691	0.20487654728965055	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	88209	0.14264592875478752	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT	73729	0.11922980286775417	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	2581720	134.17409	1
GGTATCA	2598730	132.12479	8
GTGGTAT	2603750	132.04425	6
TGGTATC	2604010	131.70987	7
GTATCAA	2620835	131.48811	9
CAGTGGT	2617075	131.45859	4
AGCAGTG	2629250	131.2643	2
AGTGGTA	2623845	131.10507	5
GCAGTGG	2673435	128.88577	3
CACGCAG	27630	29.387074	145
TGGTATA	34810	28.782568	7
GGTATAA	35510	28.684755	8
GTTGTAT	39700	27.611273	6
CAACGCA	2604255	27.26326	10-14
AGAGTAC	2597290	27.124079	15-19
ATCAACG	2608505	27.116507	10-14
TCAACGC	2621300	27.086039	10-14
CGCAGAG	2603310	27.085304	15-19
ACATGGG	2498115	27.060242	20-24
CATGGGG	1133100	27.054031	25-29