SRR6211796_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6211796_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	32586827
Sequences flagged as poor quality	0
Sequence length	151
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	877314	2.692235116969197	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	537930	1.6507590628569022	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	138155	0.42395965707247285	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	45272	0.1389273033548188	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAGTTGAGTGCTGAAAAA	37125	0.11392640345130871	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	35255	0.10818788831450206	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	1445045	89.43858	1
AGCAGTG	1481390	86.67893	2
CAGTGGT	1480565	86.35578	4
GTGGTAT	1484765	85.960075	6
GGTATCA	1487180	85.9253	8
AGTGGTA	1488080	85.87241	5
TGGTATC	1486435	85.72206	7
GCAGTGG	1492845	85.59919	3
GTATCAA	1507470	85.30983	9
CGAACTT	5610	56.117218	1
CACTTCG	7415	42.848164	1
CGTGATT	6280	39.484722	3
ACTTCGA	8885	35.90519	2
CGTGATA	6075	33.298187	3
CGTGATG	9480	28.909864	3
CGAAGTA	4710	27.708534	2
TGACTGG	16280	27.478481	2
AACGTGA	27710	27.329597	1
CCGAAGT	5145	26.082884	1
GTGACTG	17825	25.06804	1