Basic Statistics
Measure | Value |
---|---|
Filename | SRR6211794_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 107237829 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2303051 | 2.1476106160261783 | No Hit |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1477869 | 1.3781228264141752 | No Hit |
AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 199579 | 0.18610876577891186 | No Hit |
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 129693 | 0.12093959865599292 | No Hit |
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATAC | 125350 | 0.11688972181635644 | No Hit |
CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 120532 | 0.11239690426780274 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGTGAC | 441355 | 0.0 | 140.79652 | 5 |
ATGCCTA | 243485 | 0.0 | 140.52632 | 1 |
CAATGGA | 673210 | 0.0 | 140.05734 | 1 |
TGCCTAA | 246510 | 0.0 | 139.46672 | 2 |
ACGTGAT | 192340 | 0.0 | 139.21573 | 2 |
ATCGTGA | 437540 | 0.0 | 138.99304 | 4 |
GATCGTG | 430570 | 0.0 | 138.94972 | 3 |
AGAGTCA | 149475 | 0.0 | 138.89308 | 1 |
GAGTCAA | 149880 | 0.0 | 138.74916 | 2 |
AGTCACT | 187490 | 0.0 | 138.74269 | 1 |
CCGTGAG | 244760 | 0.0 | 138.33519 | 1 |
GTCACTA | 189595 | 0.0 | 138.03758 | 2 |
AGCTGAA | 201705 | 0.0 | 137.81728 | 2 |
CTCAATG | 263005 | 0.0 | 137.72919 | 1 |
CGTGACT | 198655 | 0.0 | 137.51648 | 6 |
AAGGTAC | 196310 | 0.0 | 137.44228 | 1 |
GAGCTGA | 201400 | 0.0 | 137.40433 | 1 |
CAAGCTA | 123445 | 0.0 | 137.33316 | 2 |
ACGCTTA | 166070 | 0.0 | 137.18 | 2 |
CGTGAGA | 246725 | 0.0 | 136.97852 | 2 |