SRR6211778_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6211778_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	123902168
Sequences flagged as poor quality	0
Sequence length	150
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	2544075	2.053293369329906	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	1071629	0.8648993131419621	No Hit
AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	263524	0.21268715814561048	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATAC	228662	0.1845504430560085	No Hit
CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT	201434	0.16257504065627004	No Hit
CTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTT	185229	0.14949617346485816	No Hit
ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC	180827	0.14594337041786065	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT	158897	0.12824392225324097	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC	132053	0.10657844179126873	No Hit
CTGAGCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	126365	0.1019877230881061	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGAGTCA	356210	141.87656	1
AGTCACT	330580	141.47668	1
GAGTCAA	355585	141.05347	2
CAATGGA	941355	140.92676	1
CAAGCTA	286490	140.67632	2
GTCACTA	334205	140.245	2
ATGCCTA	188170	140.11633	1
ACGTGAT	192830	139.46347	2
CTCAATG	355480	139.18106	1
ACAAGCT	290340	139.09587	1
AGTCAAT	202005	138.9384	3
AAGGTAC	221115	138.77678	1
AGCTGAA	190615	138.3465	2
TGCCTAA	190495	138.27475	2
ACTTCGA	201050	138.10641	2
GAGCTGA	190445	137.93466	1
AACGTGA	196470	137.3859	1
GACGGAT	125145	137.31711	3
AGGTACA	223760	137.061	2
CTGGCAT	146465	136.65125	1