Basic Statistics
Measure | Value |
---|---|
Filename | SRR6026875_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 144273908 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 688311 | 0.477086265660732 | No Hit |
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 484923 | 0.33611275020012626 | No Hit |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 320538 | 0.2221732289943931 | No Hit |
CCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGATA | 209055 | 0.1449014606300122 | No Hit |
CATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGATAC | 156924 | 0.10876810795199365 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGGTA | 1312350 | 0.0 | 141.2989 | 2 |
ACGCTTA | 455975 | 0.0 | 139.47618 | 2 |
ATGCCTA | 300410 | 0.0 | 139.03203 | 1 |
TCGGTAA | 393975 | 0.0 | 137.86874 | 3 |
TCGGTAT | 468355 | 0.0 | 137.30238 | 3 |
GCTCGGT | 1361305 | 0.0 | 136.93384 | 1 |
AACGTGA | 314495 | 0.0 | 136.41936 | 1 |
TGCCTAA | 303405 | 0.0 | 136.21669 | 2 |
ACGTGAT | 315240 | 0.0 | 136.10202 | 2 |
TCGGTAG | 492625 | 0.0 | 135.71048 | 3 |
ACGTATC | 181405 | 0.0 | 135.22859 | 1 |
CTGTAGC | 395670 | 0.0 | 134.87303 | 1 |
GATGTAC | 258525 | 0.0 | 134.35756 | 2 |
TACGCAA | 173985 | 0.0 | 133.04115 | 2 |
ATCCGTC | 241010 | 0.0 | 132.6329 | 2 |
GTACGCA | 176950 | 0.0 | 132.48265 | 1 |
AACGCTT | 488905 | 0.0 | 132.00691 | 1 |
GATAGAC | 150935 | 0.0 | 131.97693 | 1 |
GAGTCAA | 192465 | 0.0 | 131.11115 | 2 |
AGAGTCA | 195870 | 0.0 | 130.6182 | 1 |