Basic Statistics
Measure | Value |
---|---|
Filename | SRR6026871_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 211217899 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCGTCTA | 625815 | 0.0 | 138.1533 | 2 |
GTCGTAG | 537780 | 0.0 | 136.44084 | 1 |
CAGATTC | 825265 | 0.0 | 135.33983 | 2 |
GAGCTGA | 841420 | 0.0 | 134.79227 | 1 |
GCGAGTA | 572680 | 0.0 | 134.78796 | 1 |
TCGTAGA | 476285 | 0.0 | 133.97911 | 2 |
ACTTCGA | 335945 | 0.0 | 133.42737 | 2 |
AGCTGAA | 753270 | 0.0 | 132.85703 | 2 |
CGAGTAA | 508940 | 0.0 | 132.42616 | 2 |
TATCAGC | 398565 | 0.0 | 132.03049 | 1 |
GGCTAAC | 428245 | 0.0 | 131.91411 | 2 |
TAGCGAC | 265930 | 0.0 | 131.86443 | 2 |
ACGTATC | 232675 | 0.0 | 131.55519 | 1 |
TCCGTCT | 731665 | 0.0 | 130.96918 | 1 |
CACTTCG | 387125 | 0.0 | 130.66397 | 1 |
ATAGCGA | 278990 | 0.0 | 130.66222 | 1 |
CGTCTAG | 215705 | 0.0 | 130.62393 | 3 |
CCTAATC | 419265 | 0.0 | 130.43115 | 1 |
ACAGATT | 907565 | 0.0 | 128.80304 | 1 |
GATAGAC | 333770 | 0.0 | 128.53674 | 1 |