SRR6026871_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6026871_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	211217899
Sequences flagged as poor quality	0
Sequence length	150
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	10038896	4.752862350931727	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	3098529	1.4669822087379063	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	1194294	0.5654321937933868	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	512389	0.24258786893813386	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	407785	0.19306365697729055	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA	242922	0.11501013936323645	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	231701	0.10969761610970291	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	14522865	93.04629	1
GTATCAA	14884085	90.77391	9
AGCAGTG	14881690	90.62405	2
AGTGGTA	14899700	90.535675	5
GGTATCA	14903115	90.44622	8
CAGTGGT	14939395	90.28263	4
GTGGTAT	14960835	90.13005	6
TGGTATC	14952845	90.10181	7
GCAGTGG	15198695	88.72182	3
CATGGGG	2137525	24.704575	25-29
ATGGGAG	1889780	23.073753	25-29
ATGGGAC	800520	22.76964	25-29
ATGGGGG	754090	22.633436	25-29
AAACCGC	259625	22.434834	85-89
GAAACCG	263820	22.260944	85-89
ATGGGAT	1626310	22.025366	25-29
ATGGGGT	484410	21.842115	25-29
CATGGGT	941640	21.837187	25-29
CGCAGAT	274755	21.553127	90-94
CATGGGC	1108235	21.277817	25-29