FastQCFastQC Report
Sun 19 Mar 2023
SRR6026867_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6026867_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences231026895
Sequences flagged as poor quality0
Sequence length150
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGTCTA22283200.0140.748672
CGTCTAG7511150.0138.524693
CAGATTC14985450.0138.093032
CGTCTAT7824000.0137.09653
CGTCTAA6052200.0136.993153
ACGCTTA4579050.0136.01042
TCCGTCT23997000.0135.766221
CGCTCGA4334250.0135.73132
CGACTGG8597600.0134.968551
ACGCTCG4556050.0134.80181
ACAGATT16153550.0134.795521
AGATTCG5022150.0133.715563
CTGAGCC8424400.0133.123921
GGCTAAC5385150.0132.710462
CAGATCT7401450.0132.438391
ACGTATC2640250.0132.436141
TAGCGAC2277650.0132.387712
AGATCTG7522300.0130.775272
CGCATAC2529450.0130.654331
AGCACCT5797600.0130.279561