Basic Statistics
Measure | Value |
---|---|
Filename | SRR6026865_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 231553101 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 294116 | 0.12701881284673447 | No Hit |
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 247963 | 0.10708688371225915 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTAATC | 715615 | 0.0 | 136.4587 | 1 |
TATCAGC | 671945 | 0.0 | 134.86589 | 1 |
CTAATCC | 717795 | 0.0 | 134.51015 | 2 |
CATACCA | 2003115 | 0.0 | 134.4491 | 1 |
ATACCAA | 1959245 | 0.0 | 134.3566 | 2 |
ACTTCGA | 343655 | 0.0 | 133.38094 | 2 |
TAATCCG | 271700 | 0.0 | 130.4506 | 3 |
ATCAGCA | 675195 | 0.0 | 130.38765 | 2 |
GGCTAAC | 401595 | 0.0 | 129.45549 | 2 |
TACCAAG | 720880 | 0.0 | 129.18407 | 3 |
TAGCGAC | 241835 | 0.0 | 129.09332 | 2 |
ACGTATC | 198390 | 0.0 | 128.46364 | 1 |
CACTTCG | 367950 | 0.0 | 127.99311 | 1 |
ATAGCGA | 246635 | 0.0 | 127.83974 | 1 |
CGCTCGA | 263860 | 0.0 | 127.162766 | 2 |
TCTATCG | 188745 | 0.0 | 127.09716 | 3 |
CTCTATC | 507450 | 0.0 | 126.61386 | 2 |
ATGCCTA | 208435 | 0.0 | 125.90886 | 1 |
AGGCTAA | 416470 | 0.0 | 125.583496 | 1 |
AGGTACA | 578505 | 0.0 | 124.99091 | 2 |