SRR6026854_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6026854_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	165352859
Sequences flagged as poor quality	0
Sequence length	150
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	17335327	10.483838685849394	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	4283325	2.590414841269845	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	918094	0.5552332179511936	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	393109	0.23773946357951997	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	391597	0.23682505544098273	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA	339112	0.20508384436219515	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC	335645	0.20298711617680584	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA	328721	0.19879970747890122	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT	220900	0.13359309378497047	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	186997	0.11308966844050758	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAAGCAGTGGTATCAACGCAG	172052	0.1040514213304289	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	17414500	75.02697	1
AGTGGTA	17901125	72.82239	5
GTATCAA	17992845	72.56929	9
AGCAGTG	17960930	72.559586	2
GGTATCA	18061755	72.09271	8
CAGTGGT	18083840	72.08616	4
TGGTATC	18118905	71.814026	7
GTGGTAT	18144190	71.80985	6
GCAGTGG	18456295	70.60732	3
TTGTATC	134020	28.235348	7
GTTGTAT	139210	27.161995	6
TGTATCA	142740	26.570974	8
GCAGTTG	143625	26.217836	3
GGTATAA	101035	24.021177	8
CAGTTGT	162140	23.50765	4
ATGGGAT	1362220	23.068026	25-29
AAACCGC	194740	22.432104	85-89
CATGGGG	1962945	22.338442	25-29
GAAACCG	198430	22.318283	85-89
ACACTCG	83430	22.21137	30-34