Basic Statistics
Measure | Value |
---|---|
Filename | SRR6026850_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 224998146 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AACATCG | 6898340 | 0.0 | 141.45155 | 2 |
AAACATC | 6946410 | 0.0 | 141.0746 | 1 |
ACATCGT | 2690100 | 0.0 | 139.83272 | 3 |
ACATCGG | 2164350 | 0.0 | 139.83069 | 3 |
CGCATAC | 849415 | 0.0 | 139.78902 | 1 |
ACATCGA | 1705715 | 0.0 | 139.36461 | 3 |
CATCGGT | 811475 | 0.0 | 137.27988 | 4 |
CATCGAT | 663655 | 0.0 | 136.90596 | 4 |
CATCGTG | 831515 | 0.0 | 136.8149 | 4 |
CATCGTA | 572180 | 0.0 | 136.36752 | 4 |
ACATCGC | 525485 | 0.0 | 135.84534 | 3 |
CATCGTT | 1165600 | 0.0 | 135.70406 | 4 |
CATCGAG | 579130 | 0.0 | 134.93253 | 4 |
GCATACA | 866500 | 0.0 | 134.86786 | 2 |
CATCGGA | 456600 | 0.0 | 134.64572 | 4 |
GCGAGTA | 414370 | 0.0 | 134.10913 | 1 |
CATCGGG | 777720 | 0.0 | 134.09804 | 4 |
ATCCGTC | 369345 | 0.0 | 133.37819 | 2 |
TATCAGC | 449280 | 0.0 | 133.00627 | 1 |
CATCGAA | 412490 | 0.0 | 132.10454 | 4 |