FastQCFastQC Report
Sun 19 Mar 2023
SRR6026848_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6026848_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125604912
Sequences flagged as poor quality0
Sequence length151
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATAGCGA4076350.0140.509611
GATAGAC4164950.0139.372041
TAGCGAC3773150.0138.820622
GCCACAT4766350.0138.226941
TCACGCA4587750.0137.894412
TTCACGC5047200.0137.724461
ACGTGAT3217800.0136.787222
AACGTGA3233550.0136.673111
ATGCCTA1490350.0135.167651
TATCAGC1670150.0133.212511
ATAGACA4058150.0132.766742
CAGATCT2239650.0131.134931
CCACATA4672200.0130.089752
TGCCTAA1399550.0129.208662
AACATCG1650750.0127.931052
CTAACGA1156300.0127.803892
AGTGGTC3032750.0127.7649461
CACGCAT1739500.0127.0413743
GTGGTCA2770050.0126.380942
ATCAGCA1586350.0126.355842