SRR6026846_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6026846_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	217705443
Sequences flagged as poor quality	0
Sequence length	150
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	1868102	0.8580869519187906	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCGCGTTGATAC	876644	0.4026743603282349	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	583749	0.2681370717956739	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGATA	501288	0.2302597459632647	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACT	455856	0.2093911818272729	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT	451538	0.20740776793531984	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	442378	0.2032002479607274	No Hit
AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	389257	0.17879984746178348	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGAT	241293	0.11083461978486225	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACTGTGT	2450375	138.56422	2
CACTGTG	4089285	138.49261	1
ACTGTGG	1982660	137.61003	2
GTGTGAC	852185	136.14423	5
CTGTGTG	1616800	136.14124	3
TGTGACT	648670	135.58113	6
GACTAGT	289895	134.25948	1
TGTGTGC	833650	133.9406	4
CTGTGTC	971975	133.6993	3
CAAGCTA	486405	133.63652	2
CTGTGGC	902095	133.33318	3
AGAGTCA	319465	133.12546	1
ACAAGCT	541870	132.52542	1
TGTGTGA	861740	132.26112	4
GTGACTC	340045	132.01369	7
ACTAGTA	269980	131.78853	2
TGTGCCT	599560	131.76491	6
GTGTGCC	870930	131.72266	5
TGTGTCA	390445	130.16861	4
CCGAAGT	378275	129.8621	1