FastQCFastQC Report
Sun 19 Mar 2023
SRR6026843_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6026843_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences184691864
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGTAG6350250.0138.152731
TCGTAGA5736800.0135.824362
ATAGCGA2912550.0132.640341
TAGCGAC2805000.0132.54862
GCGAGTA3612650.0131.255691
TAGGATG8126300.0130.755341
CGAGTAA3368300.0129.454622
CGCATAC3039750.0128.38481
TATCAGC3563350.0127.938441
GATAGAC2695700.0127.796241
GCCATGC4720200.0127.7242
ACCTTAC5361800.0127.248722
GGCTAAC4461250.0127.1692052
AGGATGA7545250.0126.842452
AGCCATG5008500.0126.163231
CAATGGA7604750.0125.366951
AGTTAGC2604300.0125.340262
ATCAGCA3356050.0124.971662
CCGTCTA2438450.0124.342812
AGCACCT4549750.0124.0176241