Basic Statistics
Measure | Value |
---|---|
Filename | SRR6026843_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 184691864 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCGTAG | 635025 | 0.0 | 138.15273 | 1 |
TCGTAGA | 573680 | 0.0 | 135.82436 | 2 |
ATAGCGA | 291255 | 0.0 | 132.64034 | 1 |
TAGCGAC | 280500 | 0.0 | 132.5486 | 2 |
GCGAGTA | 361265 | 0.0 | 131.25569 | 1 |
TAGGATG | 812630 | 0.0 | 130.75534 | 1 |
CGAGTAA | 336830 | 0.0 | 129.45462 | 2 |
CGCATAC | 303975 | 0.0 | 128.3848 | 1 |
TATCAGC | 356335 | 0.0 | 127.93844 | 1 |
GATAGAC | 269570 | 0.0 | 127.79624 | 1 |
GCCATGC | 472020 | 0.0 | 127.724 | 2 |
ACCTTAC | 536180 | 0.0 | 127.24872 | 2 |
GGCTAAC | 446125 | 0.0 | 127.169205 | 2 |
AGGATGA | 754525 | 0.0 | 126.84245 | 2 |
AGCCATG | 500850 | 0.0 | 126.16323 | 1 |
CAATGGA | 760475 | 0.0 | 125.36695 | 1 |
AGTTAGC | 260430 | 0.0 | 125.34026 | 2 |
ATCAGCA | 335605 | 0.0 | 124.97166 | 2 |
CCGTCTA | 243845 | 0.0 | 124.34281 | 2 |
AGCACCT | 454975 | 0.0 | 124.017624 | 1 |