Basic Statistics
Measure | Value |
---|---|
Filename | SRR6026841_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 184156353 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 221466 | 0.12025976643879345 | No Hit |
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 219796 | 0.11935292832390093 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACGCA | 622930 | 0.0 | 140.4908 | 1 |
TACGCAA | 619290 | 0.0 | 139.57382 | 2 |
GATAGAC | 320615 | 0.0 | 136.33516 | 1 |
GCGAGTA | 399540 | 0.0 | 136.08078 | 1 |
CGAGTAA | 398805 | 0.0 | 135.12234 | 2 |
AGAGATC | 634515 | 0.0 | 134.66911 | 2 |
ACTTCGA | 219490 | 0.0 | 134.36662 | 2 |
ACCTTAC | 568940 | 0.0 | 134.05583 | 2 |
ATAGCGA | 203285 | 0.0 | 133.90164 | 1 |
AGGCTAA | 291015 | 0.0 | 133.82584 | 1 |
GGTGGTA | 1431195 | 0.0 | 133.75908 | 2 |
TATCAGC | 274420 | 0.0 | 133.25505 | 1 |
CTCAATG | 369805 | 0.0 | 132.72366 | 1 |
TAGCGAC | 205235 | 0.0 | 132.61018 | 2 |
GGCTAAC | 294315 | 0.0 | 132.44601 | 2 |
ATCAGCA | 273070 | 0.0 | 132.0509 | 2 |
TCGTAGA | 249480 | 0.0 | 131.70337 | 2 |
CAGTTCA | 394880 | 0.0 | 131.62456 | 2 |
ATAGACA | 329695 | 0.0 | 131.59135 | 2 |
CACCTTA | 582570 | 0.0 | 131.4552 | 1 |