Basic Statistics
Measure | Value |
---|---|
Filename | SRR6026838_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 149723669 |
Sequences flagged as poor quality | 0 |
Sequence length | 150-151 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 152943 | 0.10215018174581335 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGGACA | 5227685 | 0.0 | 140.56197 | 1 |
AGGACAC | 5037220 | 0.0 | 140.11859 | 2 |
GCCTAAG | 575195 | 0.0 | 138.63083 | 1 |
GGACACT | 1867595 | 0.0 | 138.22116 | 3 |
AGTTAGC | 354580 | 0.0 | 137.08418 | 2 |
GACACGT | 527285 | 0.0 | 136.06482 | 4 |
GACACTT | 609620 | 0.0 | 135.75024 | 4 |
CCTAAGT | 427415 | 0.0 | 135.59416 | 2 |
GACACTA | 542970 | 0.0 | 135.13625 | 4 |
CTAAGTC | 237910 | 0.0 | 133.08939 | 3 |
GACACAT | 544020 | 0.0 | 133.0261 | 4 |
GGACACA | 1591530 | 0.0 | 132.57098 | 3 |
GGACACG | 1661325 | 0.0 | 131.84029 | 3 |
GAGTTAG | 404760 | 0.0 | 129.71097 | 1 |
GACACTG | 658635 | 0.0 | 128.92046 | 4 |
GTTAGCG | 132090 | 0.0 | 124.41932 | 3 |
CTAAGTG | 245125 | 0.0 | 124.18505 | 3 |
TATCAGC | 125580 | 0.0 | 123.140015 | 1 |
CCTAAGG | 184140 | 0.0 | 122.86138 | 2 |
ACACTGT | 256245 | 0.0 | 122.60785 | 5 |