FastQCFastQC Report
Sat 31 Dec 2022
SRR5849262.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5849262.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95445
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACAGCCACTTATCTCGTATGCCGTCT8330.8727539420608728No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGCCACTTATCTCGTATGC6820.7145476452407146No Hit
GCTATAGGGAGAACTGCACTAGGATTAATTTGTTTACAAGAAGAAATTTAAA1390.14563361098014563No Hit
GTCACTGGGATTCAGTGAATTACTCAAAATACATAATGAAAGGAGAGTTGCC1340.1403949918801404No Hit
CTATTCGGGTAAGTTTCCATTATCTGAAATAGTAAAGAGAGTTTAGGAATTA1330.13934726806013933No Hit
CATGCGGGATGCTTTAGAATGAATACGAACAAGTTTTCTGAAAGTAAGTGAA1320.1382995442401383No Hit
TACAAGGGGGACTGAGGCGCGCTGTTCTGGGACCGGAGGAGTGGGGTTTCTA1270.13306092514013307No Hit
AAGCTTGGGATGAGAATTTCTAATAATGAGAATTTTACTTTGTCCTCATAAA1270.13306092514013307No Hit
CTCGCTATGGGGGATATAAAAATCGACCCAAATTATCTCATCTTTACAAATA1260.132013201320132No Hit
TGAAACGGGGCTTTAGAGGCATATCATAAATTTCTATATGTATTTTTTTTTT1260.132013201320132No Hit
TAATGCAGGGGGTAGCAAATACATTTTGGCTTAAACAAATTAGGGATTTTTT1260.132013201320132No Hit
ATGTGTGGGCAGTTTAAAAAAGCAGTGACAATGTGTCCATTTCCACCAAAGT1250.13096547750013096No Hit
GGCACAGGGCACTAAAAATGCCTACTCTTCCTGTTGATGTTCCTTTTCTGTT1200.12572685840012573No Hit
AGAAATGGGTCCCTGACAACCCTGGTAATATGGATGAAAAAGAAGTTTATCT1200.12572685840012573No Hit
ATCAACGGGCCCACTTCCTGATGAGAAGTCCCGTGTTGCCATCCTCAAGGCT1200.12572685840012573No Hit
GATGTAGGGATACTCATTTAATTAAGATTTAATCATTTGCTAATGGAAATCT1200.12572685840012573No Hit
GTAAATGGGCATTCCTGCATATTCTAATGTATATGATGCAAATGTGTGTCTC1200.12572685840012573No Hit
TGCACTGGGAAGTCATTTTAAAGAAAGTTAGTTCATAGTTGTTGCCTTTTAA1180.12363141076012364No Hit
AGGCGCGGGATCCAATTTGCCAGTCTGTGTCTTTTAATTGGAGCATTTAGCC1180.12363141076012364No Hit
GATTAAGGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGA1170.12258368694012259No Hit
GGTAACGGGGAATAACTTGACCCTAACCTGTAGAGAATAAGAGCATTCAAAT1160.12153596312012152No Hit
TCCAACGGGGCCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAAT1160.12153596312012152No Hit
AGTTTCGGGCGAAGTGAGACATTTAAAAAAAATGATAAAATTGTCAACTCAT1160.12153596312012152No Hit
AAGCGTGGGATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTA1160.12153596312012152No Hit
CTACTGGGGGCACAGCCGCGCGGGCGGCGGCCAGGAGTCGGAGTCGGAGTCG1150.1204882393001205No Hit
TAAACCGGGATAAAATTGTTGAAAATAAAATCCATTCATGCAACTAACTTAG1150.1204882393001205No Hit
TAACTTGGGATACACTTAATTCATTATTTTTACCAACTGAGAATATTCTATT1140.11944051548011944No Hit
CTACCTGGGTCACAGCGGGTTTCTGGACCAAAGTTAATACTTTCCTTTCTAG1130.11839279166011839No Hit
TTTACTGGGGAAGCCAGTCATACATTAATTCTATTGAAATAAATGCTTTACT1130.11839279166011839No Hit
CCGGGATATTCTTTAAGTGTTTAATTAATCTCTGGATATGGTAAGATTCCTT1130.11839279166011839No Hit
GCAGCAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1120.11734506784011735No Hit
TGATTTGGGATGAGCGGGGCCGGGTTTCCTTCCTGGATGCTGTTTCCTTCCG1110.1162973440201163No Hit
CATTGGTAACTTCAAGTAAGGTATCTATAGAATATACCCAAAAGGAAATGGG1110.1162973440201163No Hit
GCACTGGGGAAAAAAAGGAAGTGTTTGGACGACAGCGAGCGGGAGAAGCGGG1110.1162973440201163No Hit
TGTTGAGGGATACCAATAGCTCAGGATTTGACTATTTTCATTAAGCCAACAA1110.1162973440201163No Hit
TTACGGGGATTTAATGAAATTATGCATTACCACATTCAAACACAAATCCATT1100.11524962020011525No Hit
ACAGTAGGGGGACCATAAGGTACATCATTTATCTTGAACATTCCGACGTGTA1090.1142018963801142No Hit
TTTCGGGTGGAATGATTAATGGAGAAACCATGAAAATATTGGTAATTTTTTT1090.1142018963801142No Hit
AGTATAGGGTACTTTTTAATCCTATGAGGTAAGTAATGTTACCATTCTTTTT1090.1142018963801142No Hit
TCTTAAGGGAGACCTAGCGCGTCCAGGTGGGAGGTTAGTGTGGCCCGGGCGT1090.1142018963801142No Hit
CTTACTGAGGAAATGAACAAAGGATGGGAACGGACATTTCTCAAAAGAAGAG1090.1142018963801142No Hit
CATCGAGGGAGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGCGT1080.11315417256011315No Hit
ATTACAGGGGCATTTATAATTGATTTTATATTGGTTTTACATCCTGTAGCTT1080.11315417256011315No Hit
ACATCGGGGGATGTCTGCCTATATTTTTATCTCAAGGTTAGTTATTGTCAAA1080.11315417256011315No Hit
CTACTCGGGTATGAGTTGATCCTCTGATTTTAGATCACATTTGTCCTCATCA1080.11315417256011315No Hit
GCATGCGGATTTATCTAATTCTCCCTACTGAAATTCAGTCTTTTTGAGAGCA1070.11210644874011212No Hit
CGACACGGAAGTGAATTGAGCATTAATGTTTCTTTTGTATAAATTCCTGTCC1060.11105872492011105No Hit
ACGCATGGGAACATTAGAGTTGGAAGTAAACCATGCAGGGAGAAAAAGACCA1060.11105872492011105No Hit
TCTTAGGGGGGCTAGTTGGAGAAGTGTCTGGAATTCTTCACTGGGGCGGGGG1060.11105872492011105No Hit
TCGTCGGGGGGAGGTAAAAAGAGATTACATAGTTTGTCCTTAGTCTCAACTG1060.11105872492011105No Hit
AACGCCGGGATGCGTGCAAAGGCACGATTGATTTATCATGCTGGCTTTTATG1060.11105872492011105No Hit
CAGCTTGGGTAACCCAAGTACGTTTTCTTATTTAAATGACAACTTTGGTGCT1050.11001100110011No Hit
TACCTGGGGATTAAAAAATGGTCAGTGTGCAAAGAAAAGAACTGCTTGCATT1050.11001100110011No Hit
CACACAGGGTGTGGTAACAGACGTCAGCTGCTTCTTTATTCGGCAATGTGGG1040.10896327728010897No Hit
TAGTGGGGGCGTTTATCATAAGCTATGTCATTAGTCTCAGCTTCCTAGTGGG1040.10896327728010897No Hit
GATGTTGGGTAGATATTTCCCATTTAAATGCCTCTAATCTCAGAATAGAATT1040.10896327728010897No Hit
TAGGGGCTTGAATTTGGCTGAGGGACAGTTATTGTACCACTTACCTGGAGAT1040.10896327728010897No Hit
AATAGGGGGAGGATCGGATTAGAGCGAAGTTTTATTCAGTGTATGGGTCTGG1030.10791555346010792No Hit
GTAGTGGGGATTCCTACTTTACAAGGACTTTTTGAGGTTAAATTAGATAGTT1030.10791555346010792No Hit
TGTCGCGGGATTGTAGAAATGTGATTTAAATACAATGGTAAGTCCCAAATGT1030.10791555346010792No Hit
AATCCTGGGATTAATAATGATCATATTCCTTCACTAAATTTTCCTTGGCTCT1030.10791555346010792No Hit
TACTGTCGGGCCAGAAGGACGTCCGGGACATCTTTGAGCGGGTCATTCATCT1020.10686782964010685No Hit
TCTGAAGGGAACATAGTTGAAAAAAGAAGTTTGGGCTAACATTTAGGAGAAG1020.10686782964010685No Hit
TACCTAGGGCATGCTGCAGCCTGGAACTCTGATCTCCAGTGTGACTGCAAAG1020.10686782964010685No Hit
GGATTCGGGAATCCAATTGCCTATTTTTGTCTTTTCATGTATGGTGAATACA1020.10686782964010685No Hit
TGTGCTGGGTAGAAACATCCAATCAAAAATAATGGGATGCATTCAACTTATA1020.10686782964010685No Hit
TCTTGGGTTGAGCTGTGGGGAGGTTCCAGCAGCAGCTACAGTGACGACTAAG1020.10686782964010685No Hit
GGTACTGGGCCAGCTAGTTCACTCCTTTCGCCGTGCGTGGTGGAGGCTGGCC1010.10582010582010583No Hit
TATGCAGGGTAATAAATTAACCTTAGCTTACTGTCACATTTTACATTTAAAC1010.10582010582010583No Hit
CTAAAACCGGGTAATAGATTTCAAGAAAAAACTGTAAGAGACAAAAAGGTCA1010.10582010582010583No Hit
GACTATGGGATAGATCCACACACAGCTGCTAGTACCACTGCTGAGATCATCT1010.10582010582010583No Hit
AACACTGGGAGAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACC1010.10582010582010583No Hit
TAGTCTGGGAGCATGTGTTAAAAACGTGTGAATTATTTATCCTGTAGTATCT1010.10582010582010583No Hit
GCTGCAGGGCCACCTGGGCGAGATCCGCGAGCTCAAGCAGCTCAACCGGCGT1010.10582010582010583No Hit
TTAACAGGGGTGCATTTGTTTGTGGCAAAAGCCTACAATTGACAAACTTGTA1010.10582010582010583No Hit
ACGCTTGGGGTTTTAAGACAGGACTTTTTAAATTTACAATATTTTTGTCCTC1010.10582010582010583No Hit
GTTTGCGGGGAAAAGATCCAGGAAAATATTGCATTCATAAAACAAGTGGATG1010.10582010582010583No Hit
CTCATCGGGTATGCATATATATTTTTCCTGCTAAAATTGGTTTCTACAATTG1010.10582010582010583No Hit
CAAAGCGGGTTGAGATAATCATGTGGTTTCTGTCATTGGTTCTGTCGATGGA1010.10582010582010583No Hit
ATGGCTGGGAGCTGAGAGTGAAGCAAAAGTAAAAACCAAAGTTCGCTTTGAA1010.10582010582010583No Hit
TGGCATGGGAACCTAGACCAGTCCTGTTTGCCTCATGATATCAGGTGGGAGC1000.10477238200010477No Hit
TGAACAGGGATATGGGTTATATTATTGTGTCTTTGTCAAACAACAAAAACTT1000.10477238200010477No Hit
GTCTCAGGGACTCGGATGGTACACAGATACTGTCTTGATGGGAGTTTTCGGA1000.10477238200010477No Hit
TTAGTCGGGGAGGAAAAGGGGAGGCAGTCTGCCCCTGGAACCAGGTTACAGT1000.10477238200010477No Hit
CCAGTTGGGAGAGTGTGATTATTGTATTAGACAACAACAACAGCAATGACAG1000.10477238200010477No Hit
CATTCAGGGCGATCTCGCGTAGGGCAGATTGCCTCTTTTAGAGAGGCTCATT990.10372465818010372No Hit
GACTGCGGGGGCGGGGACCGGAAGGATGGCGAGGAAGTCGGAAAGGGTTTCC990.10372465818010372No Hit
GGATGCGGGGGCCCACGTGGCCTCCGCGGGCCCCGCCAGAGCCTGCGCCCGG990.10372465818010372No Hit
CGCACGGGAACCTAAATTACAAGTCATCGTGGAGATTTTATGAAAAAACATA980.10267693436010268No Hit
AGCGATGGAAGAATAAAGAATAACAATAAGAAAATTTAATACATGTAAAAAC980.10267693436010268No Hit
GTAGTAGGGCTGTACTCTGAGGAGGGGAAGGGCATCTTCGACAGCAGGAAGA980.10267693436010268No Hit
CAATAAGGGCTAGGAAATATTTCTTAGTGACCCCAGGAAAAATTGCCCCAGC970.10162921054010163No Hit
ATAATTGGGACATTATATTGAACCAGATGGTTAATACTATATTTGTAACAGG970.10162921054010163No Hit
GCTTATGGGCTGCCCAGCCACCTTTTCAGAAACCCAAATAATTCCTATAATA970.10162921054010163No Hit
CAGAATACTTGTAATCTGAGCATATCACACCTCCACATTTTGCTTGTGATGC970.10162921054010163No Hit
ATCATGGGGTATTGTGATTGCTAAAATAATTCTTAAGCTACTTATATACATA970.10162921054010163No Hit
GTATAGGGGGTATCAAAACCTATGAGATATGGTGAAAGCAGTATTCAGAGGA970.10162921054010163No Hit
AAAACAGGGGCGGCAGGAGGGAAGATGGCGGACGAGGAGAAGCTGCCGCCCG970.10162921054010163No Hit
GTTACAGGGCGATCTAAGTGCGGACATTTCAGCTGGAGCATTTCTCAAAAGG970.10162921054010163No Hit
GCTCCCGGGGGGCCCCGAAAAGTTAAGTTAACTTTGCTGTAGAGAGAGAGCA960.10058148672010057No Hit
GTTTAGGGGAAAGAAAAAAGATTAAAGTATTGTGACTAGATAAGTATTTTGC960.10058148672010057No Hit
ACCGTTGGGTGAAGAGGGAAGAATACTTCCAAATTTATTTTATGAGACCAGC960.10058148672010057No Hit
GTTTCTGGGCATGCCACTGCACTCCAACGTGGCAACAGAGTGAGACTCCATC960.10058148672010057No Hit
AAATACGGGATGGAGGCTCGGGCAGCTATTCGGTATGTTCAAACTCAGACAC960.10058148672010057No Hit
GTTTGAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC960.10058148672010057No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)