FastQCFastQC Report
Sat 31 Dec 2022
SRR5849113.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5849113.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57250
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCTCGTATGCCGTCT6921.2087336244541484No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCTCGTATGC5050.8820960698689956No Hit
GGCGCGGGCAATCACCTCCAGTTATTACAGAGGAGCCCATGGCATCATAGTT1100.19213973799126638No Hit
CTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCCTGTCTCTTATAC1040.1816593886462882No Hit
AGCAATGGGTCTGTACAGAGCCGTAAAAACTGAAGTTCTGCCTCTGATGTAT920.16069868995633188No Hit
GGGTGAGGGGGGGACATTCACTATAATGATCTAAGAAGCTACAGATTGTCAT870.15196506550218342No Hit
ACAGATGGGATGTACAGGATACTTAAAATGGAATAACTTTTTGGTTGCAAAA860.15021834061135372No Hit
TTATGGGGGAAGAGATGGATGAGGAAGAATTTTCAAACTTGAGGGAACAAAT860.15021834061135372No Hit
ATACGTGGGGACCGGACTGTGTGCCGGGAGATCCGCCACAACTCCACGGGCT850.14847161572052403No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAGCTCCA840.14672489082969434No Hit
GTAGTAGGGCACGGCGGGATATGTCATACCTCCATTGGGGAATAAGCATAAC840.14672489082969434No Hit
GGCACAGGGATAGTTGAAACTAAAGAAACATAAATTTTTCATTCTGCCTCTT830.14497816593886464No Hit
TTCCGAGGGGGGAAGGCAAAAGGACATTCCAGGCAAAAGGAACAGCTTGAGC810.14148471615720526No Hit
GGCGCAGGGGTCCAGAGCAGAGAGGAACCGGCGCCTGCATGGGGACTATGCA800.13973799126637554No Hit
TCTACGGGATAAATTCTAGAGTTACTATTAGTGTTTTTCTAATGGATCTTTG790.13799126637554585No Hit
AACGGGGGGAAAAGGGATTTTCTGGTCTGTTTCTGACTTTAAGTTACACATT790.13799126637554585No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCCTGTCTCT790.13799126637554585No Hit
GCAGCCTGTCCTCATTGGAAACACCATAAGAAGTCACCTCATTCAGTTACTT760.13275109170305677No Hit
GATATTGGGGTTCCTTTTCATTATTCTATCTTCTGTCATATGAATGTTGAGC740.12925764192139738No Hit
TTCTCAGGGGTAGGCAGTGACATCATAGCCTTGTTCCTTCAGCCACACGAGG740.12925764192139738No Hit
CCAGCAAGGGCTAGATGGTTGATTTTCTCCCATAGCTGACAATTCTGCTACA730.1275109170305677No Hit
ACGCGGGGGAGACCAAGGAAACTGGAAAACTGTATCAATCAGGCTTTTCCAC730.1275109170305677No Hit
ATTCTCGGGACTTTGTAGTTGAACTTGAGCTTCCTCTATTCAAAGATTCCAG730.1275109170305677No Hit
GCATGGGGGATGGCAGCTTTTCTATTCAGAATAAATTTTATTCCATTTACAT730.1275109170305677No Hit
CTTTCAGGGGGGACACACCATTGTAACTTTTTGTTAGAGATGATCCCATTTA720.125764192139738No Hit
CTGCCGGGGGAAAAAACTTCTCTACAAAGTAACTAAGCCCTAGTAACAGAAA720.125764192139738No Hit
TTTCGCAGGGGGTGACTTTATAGTGAGATGCTTCTTGAGTATAATATACTCA710.1240174672489083No Hit
AGCCAGGGGCTAAGTTACACCGGTGTTTCTCCAACTGTGGCCACAATTCATT710.1240174672489083No Hit
CCCTGATGAACATAGATGCAAAAATCCTTAACAAAATACTAGCTAACCGAAT710.1240174672489083No Hit
TACGCTGGGATTTGAAAATACTGATGAAAACTTAAAAATGTAACGTGAGGAA710.1240174672489083No Hit
CATAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA710.1240174672489083No Hit
TAACACGGGACCTGTGTGGATATGTTGAATCAATAGGGATATGAATTACATA700.12227074235807861No Hit
GAAGCGGGTCTACGCACGGGACATTAAACTCAAGGTGGTTGAGTTGCAGTAG690.12052401746724892No Hit
GCAAGAGAACACAAATAGACAACTCAATAATACCAGGAAAAACAATACATAA690.12052401746724892No Hit
ACGTAAGGGGAGATTTTCCCAATTGAATTGACATTTCAGTTGTTGGTCTGTT690.12052401746724892No Hit
ATGGTAGGGGATCTTGACACTAGCACTGTTAACTTAAACTCTGCATGACTGA680.11877729257641922No Hit
ACAGCGGGCTATTCAGAAGAGAAGGGAGAGTCATTGTACGAGGCCCAAGATA680.11877729257641922No Hit
TTCGTAGGGAGTTCGGTTTTGGCATATTGAAATGCCAGCTGGCAGTTTGAAA680.11877729257641922No Hit
ATGCGAGGGAATGGATGGGTGGCTCGTACAATTGAGACCATGATTTCATGTT670.11703056768558953No Hit
ATTAGGGGAGCCAAGCCACACGCTGAAATTCTCCTAACCTTTAAATGTGCAC670.11703056768558953No Hit
GACGCAGGACAAAAATAGAAAGATGAAAATATGAAACATGTTAATTGACATG660.11528384279475984No Hit
TTCGCGGGATAGAGAAAGTTGTTGCCACCTAATTTGATTGTGGGCTTTCTTG660.11528384279475984No Hit
ACGCAGGGGAGGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGG660.11528384279475984No Hit
GACGGGGGACCCTCTTCCGGCCTCAGCTGTCCGGGCTGCTTTCGCCTCCGCC660.11528384279475984No Hit
TTCGCTGGGCACCTGTTCGACTCCCCATCCCCAGGATGTCAACCTCAGTCCC650.11353711790393012No Hit
GTATCCGGGACCTAAGCTGAATTCGGAATGCAAAAGTTATTGTTGGCTACAG650.11353711790393012No Hit
CTTCAAGGGGGGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATAC650.11353711790393012No Hit
GGGTTGGGGCAAACCAACCACCATCAAGAAGCACAAAGAGGGTTATTACATA650.11353711790393012No Hit
ATCTTAGGGAAGGAGAAGAGGATAATTGTAGATTGGGCTGATCACAAAATAT650.11353711790393012No Hit
TTAAGTGGGGATGCATACTTCAAATTAAAAAAAGATTTTTGGTAGCTAGGAG650.11353711790393012No Hit
AGCTTGGGTGACAGAGCGAGACCCTTTCTTCAAAAAAACAAACAAACAAACA640.11179039301310043No Hit
CTTTTTGCGGGATCCTCACATGTGGCACGTAAGGTCTCATTTGATATTGTGT640.11179039301310043No Hit
AGCAGTGGGAACTTCAGTAAGAATCAACTATGTGAAATTCCAAAAAGGATGG640.11179039301310043No Hit
CAAAGCGGGCAGAGAGCCGAGATTTCGCCATTGTACTCCAGCCTGGGCAACA630.11004366812227073No Hit
GACAAAGGGATGTGCCATCAGATTATTTAAATAAGGGGTTTTTAAGCATGAA630.11004366812227073No Hit
GCTAAAGGGAAGCACATGGGCACTTAGGAGGGGGTCTAGGTTACATTGTGGC630.11004366812227073No Hit
GTTTCTGGGGGTATTGTTGGCGGAGTCCTTAGATCAGAGATTTTTGTTTTCG630.11004366812227073No Hit
AGGAACGGGATTCCTTTCTGCATTTATCTATCCATATTTTAGGAAGAAGAGC630.11004366812227073No Hit
ACCGCCGGGGCAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCA630.11004366812227073No Hit
ATGTATGGGGTGTCTTATGGGTCATATTTCAGTTTTAAGATCTAATTTTTAC630.11004366812227073No Hit
TTACCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC630.11004366812227073No Hit
TAACGTGGGGAACAGCCCTGGCACGGTGTATTCTGGGGCCTTGGGCACACCA630.11004366812227073No Hit
CTTACAGGGGATAGGTAAAAGATCAAAGCTTATTCTTCAAATTCTGAAATAA620.10829694323144104No Hit
GCTCTCGGGGGATGAGACAATAGTTGTAGGAATGACCAATGGAATACTGAGT620.10829694323144104No Hit
ACATACGGGCGCCGCCATGATGCTGCTGCAGCTGCTGGAAGGCGTGGACCAT620.10829694323144104No Hit
TCGCTAGGGCAACAGAGATCAGCAAATAAATATAACCAAAGATTGTCCATTA620.10829694323144104No Hit
AGCTGCGGGTAATTTAAGTATAAAGTAAAATAATGGGCATTATCATTGGATG620.10829694323144104No Hit
TGTGCTGGGATTACAGGCATGAGCCACTGCACCCGGCTTGAATCATCCTTTT620.10829694323144104No Hit
AATAGAGGGAGAATGTGAAATTAAATAATGGTTTGAACAGAAAATTCAAACA620.10829694323144104No Hit
GCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACA620.10829694323144104No Hit
TAGAACGGGGTATGTAAGGTACAAAGTGTTATTAATCAGAAACAGGAAGAGA620.10829694323144104No Hit
TGTACAGGGAAGGCTGAATCATCTTCATGCAAATGAGTTCAGCATAATTTCC610.10655021834061135No Hit
ATAATGGGCGGCTCAAGGTGCAGCGCCTCTGCTCAGAAATGGAAGAATTAGC610.10655021834061135No Hit
ACAGACGGGATTACCAACAGAGGCAATAAAAGCTGCAGTGAAATTGCCATGA610.10655021834061135No Hit
TTCTCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC610.10655021834061135No Hit
GTTTAAGGGAGCCCTTGATGGATTCAGCTCATTTTAAGCAAGTGAGTTGCAA610.10655021834061135No Hit
GCGTTTGGGGTAGCAACTATACTTTCCAATGACTAAAGAAAGAAAATCTCAG610.10655021834061135No Hit
CAAGCAGGGGAAAAATATATATGATAGAAAAATTGAGTGTTTTTCCCCCAAA610.10655021834061135No Hit
AGAGATGGGGTGAATAATAGGAATATATTTTGCAGAATCTAACATAATACCC610.10655021834061135No Hit
TGACATGGGATGTTTAGCCTGAGTCATGGCCCCTTTAGATGAAAACATTGGT610.10655021834061135No Hit
TTTTTAGGGGGATCTACTGTCATTTGTATGCAATTTCCTGTTACCTTGAAAA610.10655021834061135No Hit
GTTGCTGGGGATAGTGAAATAAGAGAAAAATGTTTAGTGCCTCAGGTTGTCA610.10655021834061135No Hit
GCCAGAAGGGTTCTGAAAATGTGTTCTGCAAAATACCTCCATCAGATTGCCA610.10655021834061135No Hit
CTAATTGGGTGAGTAATTTAATGCCATTTGAGAAAAAAATAATTTTTTTCGT600.10480349344978165No Hit
TTACTAGGGCACTGTTTGAAATGTAAATTATTCTTAGAACACTTTCAATGGG600.10480349344978165No Hit
GAAGCAGGGAGTTTGGTGCCCCTCTGAGACAGAAATCCCAGAGGAAGGAGCA600.10480349344978165No Hit
ATCTACGGGATATGCAGATTCTCCACTGAGCAAATGTTCAGCACTCTTAACT600.10480349344978165No Hit
GTTATTGGGCGGAGTTCAACGTCCCAGCAGTCTTGGTAAAAGGAGGGAGCCT600.10480349344978165No Hit
CACAGTGGGATGGTGGGAGCAGGAGGAAGAGGGAGCAAAGGGGGAAGTGCTA600.10480349344978165No Hit
ATCTTCGGGAGAAGATGACAGTTTGGTAGATTAAAAAATGGTTATGCCAATG590.10305676855895196No Hit
GAGCAAGGGGGACAACAAGGATATGAAAATTCAGGACCAGGGTTCTGGACAG590.10305676855895196No Hit
GATAGGGGACTTCTGAGTTGAGGTCAAGGAACAGGCAGACACCTGCAGTTAA590.10305676855895196No Hit
ATGTAAGGGAACAAAAGACACATTTAATAGAAGTAAAACACACAAGACCGCT590.10305676855895196No Hit
TTGTTCGGGAACAATTAAAATGAACTGTTTAATGAATATATTTGAATATAGC590.10305676855895196No Hit
GATTCAGGGTACTTACAGGGTATGGCTCTCTCGGCATGATGACCAGCGTGCT590.10305676855895196No Hit
ATGTGGGGTCAAAGAGCATATTTTCTTCTTCTTGTATCTGTCATGAAACTGT590.10305676855895196No Hit
GTGACTGGGCAAGCAGCTATTATTATTTTATTAAATCTTTAAAATACATGTC590.10305676855895196No Hit
GCGACCGGGGCGCCGGGGGAGGTGGAGGGACGCCCTGAGAACGCACCTCCGT590.10305676855895196No Hit
ACAGTGGGGTTATTTACATCAAATAATGAAATAACTGAAATGTACAAATGTC590.10305676855895196No Hit
TAGCACGGGAAATGTCAGATATTTTTAATGCCCAGCTATAAATAATTTTGGT580.10131004366812227No Hit
GTCAGAGGGCATCTCAAAAGAGTAGAAGAAAGGAATATTTAAACAAATGGCT580.10131004366812227No Hit
AGATATGGGGAGCACAAAGCTTATATCTAAGGATTCTGATAAAATGCAAAGA580.10131004366812227No Hit
CTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCTCGTATGCCTGTC580.10131004366812227No Hit
TTTGGCGGGTCTGGCACATAATGAGAAATTTGTGTGAATTTATTGGTTTAAA580.10131004366812227No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)