FastQCFastQC Report
Sat 31 Dec 2022
SRR5849112.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5849112.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56790
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCTCGTATGCCGTCT6921.218524388096496No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCTCGTATGC5290.9315020250044023No Hit
GGCGCGGGCAATCACCTCCAGTTATTACAGAGGAGCCCATGGCATCATAGTT1030.18136995949991197No Hit
TACGCTGGGATTTGAAAATACTGATGAAAACTTAAAAATGTAACGTGAGGAA950.16728297235428774No Hit
CTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCCTGTCTCTTATAC890.15671773199506955No Hit
CGAGCTGGGCTACCATTTCCCACAAGAATTTTCTAAGACAAGTGTTATTACC890.15671773199506955No Hit
TCTACGGGATAAATTCTAGAGTTACTATTAGTGTTTTTCTAATGGATCTTTG840.14791336502905442No Hit
TTCCGAGGGGGGAAGGCAAAAGGACATTCCAGGCAAAAGGAACAGCTTGAGC830.1461524916358514No Hit
ACGTAAGGGGAGATTTTCCCAATTGAATTGACATTTCAGTTGTTGGTCTGTT830.1461524916358514No Hit
TAGAACGGGGTATGTAAGGTACAAAGTGTTATTAATCAGAAACAGGAAGAGA800.1408698714562423No Hit
TTAAGTGGGGATGCATACTTCAAATTAAAAAAAGATTTTTGGTAGCTAGGAG790.13910899806303928No Hit
GGTTTTGGGGAGAGTCCCTGTATTGGCAAGTAGTAGCCAATCTGGAGACTCT790.13910899806303928No Hit
TTACTAGGGCACTGTTTGAAATGTAAATTATTCTTAGAACACTTTCAATGGG780.13734812466983626No Hit
GCCTAGGGACCGCAGCCTCAACGACCTAGAGAAGGACGTCATGCTCCTGTGC780.13734812466983626No Hit
GTTTCTGGGGGTATTGTTGGCGGAGTCCTTAGATCAGAGATTTTTGTTTTCG760.1338263778834302No Hit
ACAGTGGGGTTATTTACATCAAATAATGAAATAACTGAAATGTACAAATGTC760.1338263778834302No Hit
GCAGCCTGTCCTCATTGGAAACACCATAAGAAGTCACCTCATTCAGTTACTT740.13030463109702412No Hit
ACAGATGGGATGTACAGGATACTTAAAATGGAATAACTTTTTGGTTGCAAAA740.13030463109702412No Hit
AGCAATGGGTCTGTACAGAGCCGTAAAAACTGAAGTTCTGCCTCTGATGTAT730.1285437577038211No Hit
TGTACAGGGAAGGCTGAATCATCTTCATGCAAATGAGTTCAGCATAATTTCC730.1285437577038211No Hit
GAACATGGGAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGGC730.1285437577038211No Hit
TTTACTGGGATGGTAGTCTCAAGTTTTTGTGTTTTCTTAAAATGTACCAGTG720.12678288431061807No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAGCTCCA710.12502201091741505No Hit
AACGGGGGGAAAAGGGATTTTCTGGTCTGTTTCTGACTTTAAGTTACACATT700.12326113752421201No Hit
GGCGCAGGGGTCCAGAGCAGAGAGGAACCGGCGCCTGCATGGGGACTATGCA700.12326113752421201No Hit
CTGCCGGGGGAAAAAACTTCTCTACAAAGTAACTAAGCCCTAGTAACAGAAA700.12326113752421201No Hit
CTTTGTGGGAGAACAGCACATGGTCACAACAAGATATTTTCTTTCCCTCCAA690.12150026413100898No Hit
AGCTTGGGTGACAGAGCGAGACCCTTTCTTCAAAAAAACAAACAAACAAACA690.12150026413100898No Hit
CTTTCAGGGGGGACACACCATTGTAACTTTTTGTTAGAGATGATCCCATTTA690.12150026413100898No Hit
ATTCTCGGGACTTTGTAGTTGAACTTGAGCTTCCTCTATTCAAAGATTCCAG690.12150026413100898No Hit
ACATAAGGGAGGTTTAGAACAGTTTCAATTTGGACTCTAATATTAATTGGTT680.11973939073780596No Hit
GTATCCGGGACCTAAGCTGAATTCGGAATGCAAAAGTTATTGTTGGCTACAG680.11973939073780596No Hit
CTTCAAGGGGGGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATAC680.11973939073780596No Hit
TTTTTAGGGGGATCTACTGTCATTTGTATGCAATTTCCTGTTACCTTGAAAA680.11973939073780596No Hit
CTTGCTGGGATTACAGGCGTAAGCCACCGCGCCCGGCCTAATCTTCTTAATT680.11973939073780596No Hit
TATCAAGGAGGGTTGAATCTGAATTGGCTTCTCAGGCTCAAGGTAACAGTGT680.11973939073780596No Hit
GAATACGGGCTCACCGTGGCTGCTGTCTTCCGTGGTCGGATGTCCATGAAGG680.11973939073780596No Hit
ATTGCGGGAAGCCTAGCATCATGGAGCCAGAAAGTATAGCCTTGCTGTCTGT680.11973939073780596No Hit
GCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACA680.11973939073780596No Hit
TTATGGGGGAAGAGATGGATGAGGAAGAATTTTCAAACTTGAGGGAACAAAT680.11973939073780596No Hit
TTCGCGGGATAGAGAAAGTTGTTGCCACCTAATTTGATTGTGGGCTTTCTTG670.11797851734460293No Hit
GTTTAAGGGAGCCCTTGATGGATTCAGCTCATTTTAAGCAAGTGAGTTGCAA670.11797851734460293No Hit
ACAAAAGGGGAACCCAGTATCTCAGTTGGAAATGCGGAACATGGGATTGGAA670.11797851734460293No Hit
ACGCGGGGGAGACCAAGGAAACTGGAAAACTGTATCAATCAGGCTTTTCCAC670.11797851734460293No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCCTGTCTCT670.11797851734460293No Hit
CATAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA670.11797851734460293No Hit
TGACAAGGGACAGTACTTACAGAGAAATTTATAACTACAAATGTCTATATAA660.1162176439513999No Hit
ACAGACGGGATTACCAACAGAGGCAATAAAAGCTGCAGTGAAATTGCCATGA660.1162176439513999No Hit
TCAGCAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA660.1162176439513999No Hit
GGGTGAGGGGGGGACATTCACTATAATGATCTAAGAAGCTACAGATTGTCAT650.11445677055819686No Hit
TCGCTTGGGGATGTGTACTTCCCAGATGTTTAATAAGGTATTTATTCAGCCT650.11445677055819686No Hit
AGCGAAGGGTTTAAAAAAGAAGCATGGAGAGAAAATGGAATATGCTCAATTA650.11445677055819686No Hit
GGTCATGGGATAAATGGAATTAAGAAATAATAAAACTTATGTAAGGTATTTA650.11445677055819686No Hit
AGGCACGGGGATACAGATCTAAAAGAATGGTTCTTAAGAACTATTGTTTACT650.11445677055819686No Hit
ATTTGAGGGACGTGCTCAGGAAATTAAAACAAAAATCAAGGAATTGAACAAC640.11269589716499384No Hit
GTTCTGAAACAGTTTCTTTCTGAAACAGAGAAAATGTCCCCTGAAGACAGAG640.11269589716499384No Hit
ACATACGGGCGCCGCCATGATGCTGCTGCAGCTGCTGGAAGGCGTGGACCAT640.11269589716499384No Hit
CTGCCGGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC640.11269589716499384No Hit
AAAATAAAAATTGAAAAAGAAAAAAAAGAGAGAGAAATATGATTTGAGAGTG640.11269589716499384No Hit
TGGTCTGGGAGGTGACAGGAAACCACACAACAATATCTTCTCCACTGATGCA630.11093502377179082No Hit
GACAAAGGGATGTGCCATCAGATTATTTAAATAAGGGGTTTTTAAGCATGAA630.11093502377179082No Hit
GCGTTTGGGGTAGCAACTATACTTTCCAATGACTAAAGAAAGAAAATCTCAG630.11093502377179082No Hit
GACGGGGGACCCTCTTCCGGCCTCAGCTGTCCGGGCTGCTTTCGCCTCCGCC630.11093502377179082No Hit
ATACGTGGGGACCGGACTGTGTGCCGGGAGATCCGCCACAACTCCACGGGCT620.10917415037858778No Hit
GACGCAGGACAAAAATAGAAAGATGAAAATATGAAACATGTTAATTGACATG620.10917415037858778No Hit
TACCGAGGGGAATGGGTTGGGTTAAATGACTGAAGTTCCTTCAAGTGCTAAA620.10917415037858778No Hit
CCAGCAAGGGCTAGATGGTTGATTTTCTCCCATAGCTGACAATTCTGCTACA620.10917415037858778No Hit
GGCACTGGTAGCAGAAATATTTGGGCAACATAAGCCCACTGACTGGAGCTTT620.10917415037858778No Hit
AACAAAGGGATCCACTGTTTGAGAGAAAGATAATATGAACCACATTCAATCA620.10917415037858778No Hit
AGAGATGGGGTGAATAATAGGAATATATTTTGCAGAATCTAACATAATACCC620.10917415037858778No Hit
CCCTGATGAACATAGATGCAAAAATCCTTAACAAAATACTAGCTAACCGAAT620.10917415037858778No Hit
GTAATTGGGATTACTACTTGACATAAAATGTCATGTTTTAGTACAAATACTT620.10917415037858778No Hit
ATTGAGGGCGATCTAGTAAGGGTAGACATGATGTACTTGCAAGATCAATTTT620.10917415037858778No Hit
ATATATGGGGGGACTGGGTTGGGAGTAACAGGATCCTCTGAGATTTAAATAA610.10741327698538475No Hit
ATTGCAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA610.10741327698538475No Hit
TTCTCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC610.10741327698538475No Hit
TAGTCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC610.10741327698538475No Hit
GCATATGGGGTGAGAAGGCATGTGCCTGATTCAGAGAGTTTAAATCACTGGA610.10741327698538475No Hit
TTACCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC610.10741327698538475No Hit
CTAATTGGGTGAGTAATTTAATGCCATTTGAGAAAAAAATAATTTTTTTCGT600.10565240359218173No Hit
CATTAAGGGGACAAAAAGGGACTCTTCTATTGAATTCGTGGTTGATGCTCAG600.10565240359218173No Hit
TCGCTAGGGCAACAGAGATCAGCAAATAAATATAACCAAAGATTGTCCATTA600.10565240359218173No Hit
TAACACGGGAGGAAGATAAACTTGTCAACCCAGAATTCCATATCCAACAAAA600.10565240359218173No Hit
AGAGAGGGAGCGCCACGTGAGACACCTACAACGAGATGCCTTAAGCCAGCTC600.10565240359218173No Hit
AGCAGTGGGAACTTCAGTAAGAATCAACTATGTGAAATTCCAAAAAGGATGG600.10565240359218173No Hit
GTTGCTGGGGATAGTGAAATAAGAGAAAAATGTTTAGTGCCTCAGGTTGTCA600.10565240359218173No Hit
TTATTGGGGAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCA590.1038915301989787No Hit
CCACGTGGGTATTGCAGTGATTTCTGAATGAAAAGCTGATTAATATCTAATG590.1038915301989787No Hit
ACGCAGGGGAGGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGG590.1038915301989787No Hit
TCAACAGGGGTGAAGGGAATATTTAGACCAAGGAAACTGGAAAACTGTATCA590.1038915301989787No Hit
ATTAGGGGAGCCAAGCCACACGCTGAAATTCTCCTAACCTTTAAATGTGCAC590.1038915301989787No Hit
CATATAGGGGTCTCAATGAACCCCAAGTAAAATAAACTCAAAGAGGTCCACA590.1038915301989787No Hit
CACTTAGGGAACGGGCCGGGGCGGGAGTTCCATGGAGACTGGGGAGCGCGCC590.1038915301989787No Hit
GAACCCGGGAGAGGTTTCTGGGAGCCAAGAGTGGTAATGGCGTCTGTATGAT590.1038915301989787No Hit
ATCTCAGGGACCTCTGAGAGGGAAGTTACTTTATCCTTGGAATAAAACTGTT590.1038915301989787No Hit
GCTCTGGGGCCTTTGTCAGAGTCATTGGCCTTGATGGAGGGGAGACTGGGTT590.1038915301989787No Hit
TATCGTGGGATATGACTTGCAGAGGATAACCATAAAATGGGTAATTCTCTCT590.1038915301989787No Hit
GCAAGAGAACACAAATAGACAACTCAATAATACCAGGAAAAACAATACATAA590.1038915301989787No Hit
ACATATGGGGTAGCCCTTCCTTGGCTCCTTCTCCATTACTGTCCTTCAGGGT580.10213065680577567No Hit
TTCGCTGGGCACCTGTTCGACTCCCCATCCCCAGGATGTCAACCTCAGTCCC580.10213065680577567No Hit
GCTCTCGGGGGATGAGACAATAGTTGTAGGAATGACCAATGGAATACTGAGT580.10213065680577567No Hit
ACAGACGGACCGATCTCATCGTGGGAAGACTTACAGGCCTCGCTACAAGAAC580.10213065680577567No Hit
CAACGCGGGAGTGCCTTAGCCCTCAGGGGCCTTGTTTCCTCACATGGAAGCC580.10213065680577567No Hit
TCACTTGGGGATTCCGAGGATAGTGTGAAGGATGGATTAGGAGATGAAGCTG580.10213065680577567No Hit
ACAGCGGGCTATTCAGAAGAGAAGGGAGAGTCATTGTACGAGGCCCAAGATA580.10213065680577567No Hit
TAACACGGGACCTGTGTGGATATGTTGAATCAATAGGGATATGAATTACATA580.10213065680577567No Hit
ATGTGGGGTCAAAGAGCATATTTTCTTCTTCTTGTATCTGTCATGAAACTGT580.10213065680577567No Hit
ATCTTAGGGAAGGAGAAGAGGATAATTGTAGATTGGGCTGATCACAAAATAT580.10213065680577567No Hit
TTTTGGGGGACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTT580.10213065680577567No Hit
AATCGCGGGGTGGAAAGCATTGTGGAATCTTAACCTTTTCGTACACACTCTT570.10036978341257263No Hit
ATGCAGGGGATGGTGGCCGAGTAACGGTAAAAGAAATACAATGAGAAAGAAG570.10036978341257263No Hit
GCTTTCGGGGTGAGCTCCCTTAGTGAATTTTGTCTCCTGCTTGGAAAGTCTC570.10036978341257263No Hit
GCACATGGGCACTTATGAGTAAGAGCATGCAGTGTTTGGTTTTCTGTTCCTG570.10036978341257263No Hit
CTTTTTGCGGGATCCTCACATGTGGCACGTAAGGTCTCATTTGATATTGTGT570.10036978341257263No Hit
GTTATTGGGCGGAGTTCAACGTCCCAGCAGTCTTGGTAAAAGGAGGGAGCCT570.10036978341257263No Hit
AATACGGGGAGGATGGGGAAGTTTCCATACTGCTACTTCCTTTCCTGTTAAC570.10036978341257263No Hit
ACGCAGAGGAGCAGCAGCCAGCACTAGGACCCACAAAAGCCTAACACACTAA570.10036978341257263No Hit
ACCGCCGGGGCAGATGGTTTGCCTTGCCTTTCCACCCCCTAATTGTCAACCA570.10036978341257263No Hit
AGCTGCGGGTAATTTAAGTATAAAGTAAAATAATGGGCATTATCATTGGATG570.10036978341257263No Hit
AATATGGGGACTTAGGTTCAAGATCACTGTTCAAACCCTGTCATGCTTTAAA570.10036978341257263No Hit
TAAATAGGGATAGCTAGTGGTATTATCTAAACTGATGAATTGTGGGGTCCCC570.10036978341257263No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)