FastQCFastQC Report
Sat 31 Dec 2022
SRR5849094.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5849094.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60027
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCTCGTATGCCGTCT9261.5426391457177604No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCTCGTATGC7321.2194512469388776No Hit
ATATGTGGGTTCACCACTCAGACACAGCTGGGGTTTCTCCCATGGGAGCTTG1610.26821263764639247No Hit
AGTCCAGCTCCCTCCCCTGCTCAGAATCTGATACCAAAGAGACAGGGCCCGG1410.23489429756609528No Hit
CTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCCTGTCTCTTATAC1180.1965782064737535No Hit
TTTATGGGGTGTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC1180.1965782064737535No Hit
AGTATTGGGGAAGAGAGGCGGAGGCGATCCTTCCAGGATTACACTGGGCAGA1140.18991453845769404No Hit
ACAGTAGGGAATTCAAATTTACCTTAAATATTTAGTAATAGAAAATATTGCT1090.18158495343761974No Hit
TCAATAGGGTGCCTCATTCAGTCTTAAATAAGTCTTGGATTTGGACTAGAAA1060.17658720242557516No Hit
TTAATAGGGAATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAA1050.1749212854215603No Hit
TCACAAGGGAACATAATTAGTAATACAAAATTATATACACATTTAAACTATC1040.17325536841754544No Hit
ATTTTAGGGCACTGGCACGAAATGAAAGGACAATCCACAGAACTGGAGAAAT1040.17325536841754544No Hit
GTACACGGGTACCACCAGAACCGTGAATCTAAAATATTTCCTCTTCATTAAA1010.16825761740550085No Hit
GAAGCAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1000.166591700401486No Hit
TCTTACGGGAGACTTCGGTTGAGGAAACGGGTATTTCATGTCTCAGGGAGTA950.15826211538141172No Hit
GGCGGTGGGAGGTGTTGATTCCTTGAAAACTCAATTACAAATATCCTTTCAG950.15826211538141172No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAGCTCCA940.15659619837739683No Hit
AATACTGGGAGTCCATCGAAGAAGAGTCCTTGGAACAAGCAACTGGCTATTG930.15493028137338197No Hit
GTTCGTTCGGGCTATAAAAAATACAAGAAATGGATTATTATAGAAGTCAGCC920.15326436436936713No Hit
TCGCTGGGGCACTGGAAATGTTCAACTGTAGTTTTATTAAGGAAGCCAGGCA910.15159844736535227No Hit
CCCAAAGGGGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTG910.15159844736535227No Hit
AAAGTCGGGATGACCATGATAGTTTATGTCTGCAACCTGAGAAGTTTTTATT900.14993253036133738No Hit
CTCCCGGGAAAGTGTTGACTCTGGAGGACTGTTTACAGCTGGAAATCTAAAG900.14993253036133738No Hit
GAAAGCGGGAGCTTCGTTTGTGCTCATTAAAAGTGAGCTGAAAACAAAAACA900.14993253036133738No Hit
GCCGTAGGGAAGTGGGATAACTAAAATCATGAGATTTGGTAACAACAATATG890.14826661335732252No Hit
TAGAGAGGGGACTGTGTACATTCTTATGCAATTTTAAGTATACACTCAGCAA880.1466006963533077No Hit
TTAAGTGGGAGTAGAAAGGGCAGAAAAAATTGCAGTCTTTGGAAAATAACTA880.1466006963533077No Hit
GCAATACGGGCTGATTTTAAATGGTCATGAACAAACACTCACATGGCACATA880.1466006963533077No Hit
CGACCTGGGAGCCAATTTATACTTTCTATTGAATGTGTCTCTAATCTCTGCC870.14493477934929283No Hit
CTGGCTGGGGGGGATGGAGGGCTCTGAAATAGTAGAGGAAGATGTCAACAAG870.14493477934929283No Hit
GGCCGCGGATAGTAATAATAATCATACCAAGGAAAAAAATCATGCCCATTTG870.14493477934929283No Hit
ACATATGGGAGGAAAACGTACGCTTGACAACTTACCCAGAGAAACCTGTCTT860.14326886234527794No Hit
CTATCCGGGCAACGTACTTTGATTTGAATACTAGTAGAAACTGGCCAGGAAA860.14326886234527794No Hit
CTTCAAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC850.1416029453412631No Hit
AGCGCCGGGAGGACCAAGCTGGGACAGCAACCACCAGGCCCTGGGGCAGATC850.1416029453412631No Hit
CAGTATGGGTCATTTCTTCAACTTACCTTTGGACATATGAAATCAGAGCTCA840.13993702833724825No Hit
ATTTAAGGGGATGACAATGTCTTTTCTTTTGTTTCTAAGTATCAGTTTGATA830.1382711113332334No Hit
ATCATAGGGAAATCCCTACCATTGTATTACAGCAGCCTGCAGCACTGGGCAC830.1382711113332334No Hit
AGAGAGGGGCAGCTGAGTGCGGCAGAGCTGCAGAGCAGGAACCAGGGCCACT830.1382711113332334No Hit
TGTCAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA830.1382711113332334No Hit
CGCATTGGGGACTTTGTTTTGGGGAGGGGTTATTATCATCTTTGTTTCAAAT830.1382711113332334No Hit
GTACTAGGGAAGGCCATAATCTCTAGAAATGCATTTACTATAGTAAGAAGTT830.1382711113332334No Hit
TTCACTGGGATGGTTGGTTAGCATGCAATGAGTTGAAAGCTTTTAGATAAGT820.1366051943292185No Hit
CAGAAAGGGTGATAGTAGACTGAGAATAACTGGACTTCAAGGTCCTTCAAAG820.1366051943292185No Hit
AGATGGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA820.1366051943292185No Hit
CACATAGGGGAAGCCGGCAAGATGGCGGCGGCTGGGGCTGGCCGTCTGAGGC820.1366051943292185No Hit
GTTCGCGGGGAAAACAGAATGCAATAGAGAAAATTAATGAAACCAAAATATA820.1366051943292185No Hit
ATAATGGGGCAGATTGTAAGCCTTTTCTGGCAAGCTTTTCTTCTTTTTTTAA820.1366051943292185No Hit
ACACAGGGGCTGTTTTTGTTTTTGAAGAAACTACTCTTAATAATAATGTAGT820.1366051943292185No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCCTGTCTCT820.1366051943292185No Hit
ATACTAGGGAGCCTTGATTATTAAACAATTCTTTTATATGGTAACTGAGATA820.1366051943292185No Hit
TGCTCAGGGAAGTGACTTCTTTACAGAAATGTACTGGATTTGGGGATACATC810.13493927732520367No Hit
TGTGCCGGGGATGGGAAGAGTAAGTCCCACTATTCCCACTCCATCTTTAGTT810.13493927732520367No Hit
GACTTTGGGCCCAGGCTTTAAGTCTGAGTTCACAGGACCACAGAATACTGGC810.13493927732520367No Hit
CCACTGGGGTGGCGCGATCTCGGCTCACTGCAAGCTCCACCTCTTGGGTTCA800.1332733603211888No Hit
TGCAGCGGGAGAATTCACGACCTTTTAACAGGTATTAATGGTGTTTATATAG800.1332733603211888No Hit
TGTGAAGGGAAGAGCGTTTTTAGTAAAGTGCCTGTGTTCATTGTGGACAAAG800.1332733603211888No Hit
GCAATAGGGGGACATATGCATGTACGTGTGTATGCACACATATGTACTCTTT790.13160744331717394No Hit
TGCCTAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA790.13160744331717394No Hit
AACAAGGGGGACCTTGGAGAGAAGTTAACAGATGAAGAAGTTGATGAAATGA790.13160744331717394No Hit
GCATTGGGGTGGATTTTGTTCATTTAAGGTATTATTATTATTATTTGCTAAG790.13160744331717394No Hit
AATCCGGGAGTGACACATGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGG790.13160744331717394No Hit
TCAAAGGGGCATGATAGGGTTGTGAAATTGAGAGATAGGAAATTACTTGTAT790.13160744331717394No Hit
GTGCTCGGGAATGAAGACTATCCAGTAGAAATTCACGAGTATTTGTCAGCGT780.12994152631315906No Hit
GCCTATGGGAACTGCAACGCAGAGAAACTATTAAAGGTATTCAGAAACGTGA780.12994152631315906No Hit
GGCACAGGGACAGGAAACATTGTACATCCACATATTAATCAATAAAAATATT780.12994152631315906No Hit
TTAGGACGGGAATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTAC770.12827560930914422No Hit
TTCCTAGGGTAACAAATTCTTCCTAATAGAGGTCCTGTTAGAGTCAATTAGT770.12827560930914422No Hit
TCAGCGGGGACTCCATTTCTACTAAAAAAATTAATGGCTCATCATAATCTAT770.12827560930914422No Hit
AAGTCCGGGTGCTGAGAATGATGGTTTCCAGCTTCATCCATGTCCCTAGTAA770.12827560930914422No Hit
TAGATTGGGGAATTAAAGGGATTTAAAAAATATAATTACACTTAAAACACTA770.12827560930914422No Hit
TCCGCAGGGAGAAAGAATACATTTATCATCATTTAAAATTTTCATTTGAATC760.12660969230512936No Hit
TTTAGAGGGCGATCTGTAACGGGGGAATCTGTAAGATCTTAGTTCCAATTCT760.12660969230512936No Hit
TAGAGGGGCCTCACCATTATGTAATGTTTCATTTATTTGAGTGATAAGATTT760.12660969230512936No Hit
GAACTTGGGGCACTCATCTGAATTTACATCTCTCTAGTATTAATGTTAGCAA760.12660969230512936No Hit
CTAGCTGGGAAGGTTGGGTGCTGCTAATTCTTTGCAAAAATCCAAATATTGT750.12494377530111449No Hit
AGCTAAGGGCTTATGAATACGGTAAATGTGGCAAAGCCTTTAGGCAGAGGAC750.12494377530111449No Hit
AGCTGGGGATGTTGATGAAGTGCACAAAAATAATAGAAGTGATATGATGTCC740.12327785829709964No Hit
TAAGCTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC740.12327785829709964No Hit
TTTACCGGGAGCCGTGAAGCAGGCATAAATATTCTGATGGTTAATTGTAGAC740.12327785829709964No Hit
CGCTGGGGGAATGCACTGTTGGGAGAGAGACACTGAACAAAATAAAAACTTC740.12327785829709964No Hit
GTTGCCGGACTGATGAGAACATTATCTGCATATGCCAAAAAATTTTAAGCAA740.12327785829709964No Hit
GTCAGAGGGCGTATCGGGACGTTCCCCATGCCTTGCCTGTCCTGCTGGGCTC740.12327785829709964No Hit
TACACAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA740.12327785829709964No Hit
GCTCAGGGGTTTCATTAAATTTGTGGTGATGTTACTCTAAACATTTTGACTA740.12327785829709964No Hit
GCGATTCGGGAATCACATTGATTCAAAAGATTCCCTCACAATACATTTTTAT740.12327785829709964No Hit
AGACTTGGTGACGTTCTTCCTAGCAGTGTTAATACATGCAAGAAGTAAGAGC730.12161194129308478No Hit
TCAATAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC730.12161194129308478No Hit
GCTCCAGGGGAACGCATTGAAAACGATGTTGCCACCATCCTGTCTCGCCGTA730.12161194129308478No Hit
GCGGCAGGGTCTGGAAGCATGAGGGGAGGGGGAGAGAGGTCAGGCCAGGCCC730.12161194129308478No Hit
ATTCTCAGGGCATGAGAGATCTGCCTCCATAACCTAATCACCTCACATCCGT730.12161194129308478No Hit
GCTGGAATGTAAACTTTGTAAAGGCATGATCCATAGCAGATACTTCTTATTA720.11994602428906992No Hit
AAGTATGGGGGGCGCAGGCCACACAGGGAGCTCCGGTCCACTGGGGGCCCTT720.11994602428906992No Hit
GAATGGGGGGGATGTCCTCGTTGACACTTGTATAATAAATATCCTCTTTATC720.11994602428906992No Hit
TATCATGGGAGACGCGGGTATTTGTGTTATCTTTATTTCTCTTCATTGTTAG720.11994602428906992No Hit
TTTAAAGGGCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCAT720.11994602428906992No Hit
GAGCAAGGGAGGAGATCAAAGTTTGCAGGATTTGCAAAAGCCTTGATTTGAA720.11994602428906992No Hit
ATACATGGGGAGTAATAATTGGCCACTGCCTTATTTATTACAAAACAGAAAT710.11828010728505504No Hit
AATCAGGGGTTCAGTGGTTTTATTTTTATCATTTTCTAGAGTAGTGATTCTT710.11828010728505504No Hit
TAGGCCGGAGGTTGAAGGAATGCTCAGTTTCATTTGCCAATAAATTGGTTTC710.11828010728505504No Hit
CGTGCTGGGAGAAAGTGCAAGCAAAGTTTCAGCTCAAATTCTCAAGAGCAAC710.11828010728505504No Hit
CATTCCGGGCACTGTATGATTTATAAACAGACAATATGTGAGTGCCTTTTGC700.11661419028104021No Hit
CCGCTTGGGGCTCTGTAACCTTATCTAAGAACTTGGAAGCCGTCAGCCAAGT700.11661419028104021No Hit
GCGATAGGGGAACAAAGAAGCGAAAGAAAGAAATTGAAGAAAGCAAGGAACC700.11661419028104021No Hit
CTCCACGGGAATACAAAAGCACCAGGGACCTGGAGACTTTCTCCAAGTTCCT700.11661419028104021No Hit
AACATTGGGAGGAGCCCAGTGGTTGAGAGTGTGGACTCTGGAGTCAGACTGC690.11494827327702534No Hit
TTTACAGGGTTATATCCAGAATATGCAAAGAACCCTTTCAACTCAACAAAGA690.11494827327702534No Hit
GTAGGCGGGCAGTGGAGGAGATGCCCATGAATGTGGCTGACCTTATTTAATT690.11494827327702534No Hit
ATTAATGGGCAAGTATTTGCCAAAAGGAGGCACTTTTTATTTAAAATTTGAG690.11494827327702534No Hit
TGCTAAGGGAGCCATCTCATAGTGAGAAAGTGTGCTGAAAACTATAACCCAT690.11494827327702534No Hit
TCGCCAGGGTCTTCACAGCCAGACATCTGGTGAGAAGAGCCGTAGACTTGAT690.11494827327702534No Hit
ATAGTAGGGGGCACCGGGTGTGGCGGGCAGAGGGGCTCCGGGCCCTGTGGAA690.11494827327702534No Hit
TAATCCGGGGAGACAGGAGGTAGCGCTGGTCCTTGTGGTTACGTGAGCACGC680.11328235627301048No Hit
TTCCCAGGGGGCTGAGAAGCGGCTGGAGGGGCAGGAGGAGGAGGAGGACAAC680.11328235627301048No Hit
CACAAGGGGATATATCCAAAGGAAAGAAAATCAGTATATCAAAGACTTACCT680.11328235627301048No Hit
CATCACGGGAGGTCAACTGTGGCAGTATCACAGGTGCTTGTGTCCAAGTAAC680.11328235627301048No Hit
GACACAGGGTAGTTCTATATGTAAATGTATAACATACAATAGTGTACTTTTT680.11328235627301048No Hit
AGATAAGGGTTGTAGTGTAATGTCTTAATCATAGTCTACCATCAAATATTTT680.11328235627301048No Hit
AGAGCTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC680.11328235627301048No Hit
TTGCACGGGTATCTGAAACCCTGGGTTAGTGATGGAGTTGGCAAAGCCTCAT670.11161643926899563No Hit
CGGGTTGGGTGTCATAGGGCAGTTGGAAACGGCCTCCTAGGGAAAAGTTCAT670.11161643926899563No Hit
ATTTCTGGGCTGCAAGTAAAGAATTGAGAGTGTGTGCAAAGCTTATTTTCTT670.11161643926899563No Hit
GTGCATGGGACAGACATATCTTAAAAATTGTATTATGTAAATTGCTATCAAG670.11161643926899563No Hit
AATCCAGGGGAAAAACAACAGAGTATGTTTCTCCCACAAACACCTTTGCTTA670.11161643926899563No Hit
GCACTCGGGTGAAATTAAATGATGAAATAATGAAATGGAAATGATGAGATGA660.10995052226498077No Hit
TCTATAGGGAGAGTGCAGCAGTGTCTTTATCTCTTGCTCAAGCCTTTCTAAT660.10995052226498077No Hit
CTGTTGCTGGGGAATATAGAAATATAAGTACGCACAGGATGCCTTCTGGCAT660.10995052226498077No Hit
CATGTGGGGCGTTGGCCACATCTTAACATTTGATTATTCATTTTTGTTTATG660.10995052226498077No Hit
GAGCAAGGGAGATGGATGATAGGTTGTTTAATGCATACAGTTTAGGATTTCT650.1082846052609659No Hit
CTTATACACATCTCCGAGCCCACGAGACGAGCTCCAATCTCGTATGCCTGTC650.1082846052609659No Hit
GTGTATGGGAAGGGTCCGTGGACCAGGAGGATTGCCTTTAATATTTTGTAAT650.1082846052609659No Hit
CAGCTTGGGTCCCGAGCTGGCGGGGTCCGTGGTGCGGGATCGAGATTGCGGG650.1082846052609659No Hit
TCTAGCATGGGACTGTGACTTCCCTGAGCTGCTGTCCCCCAGCAACGTGGCC650.1082846052609659No Hit
GCATAAGGGCATGTAGCTATGATTGCTAATTCTGTCAACCCCTCAAAAAAGG650.1082846052609659No Hit
CTAGGCGGGGATCATCCAGACTAAAGCCCTGCAGGTGGGCTGTCTGCTTCGG650.1082846052609659No Hit
TGCCTCGGGTAGAAGTCAATTAATACAATCATTTTGTCTTAATTATTTAAAG650.1082846052609659No Hit
TTTGCTGGGGAGATGCAATCTTCCTAGAATTAGTTTTACTTTAAATGAGAAC650.1082846052609659No Hit
CCTTTAGGGATGTAAAATGAGTGAAATCTGGGTGTTGGTAGATTGTATCAAT650.1082846052609659No Hit
TACAGCGGGTAACAATTTAGACTTTTTAAACCAAGCATTGAATAATGGCTGG640.10661868825695103No Hit
ACATATGGGAAGGGTTTTCTGGATGAATAGGGTACTATATAATTTTTAATGC640.10661868825695103No Hit
TTATATGGGGAACATTAGGATATTTTACTACCTGACTGAAAGTGGATAAACA640.10661868825695103No Hit
ACATCGGGGATTAAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCA640.10661868825695103No Hit
TAACTAGGGCTTTCTCACTATGGCAGTTTTAGGTACTATTTTAATTAATTTT640.10661868825695103No Hit
GATTGAGGGCATCAAGAGTTTATTATTGTACTTTATTTTGGAGCCAAAAAAT640.10661868825695103No Hit
ATCACGGGAACAGGTGCTTACTTTGGATAATAACAATTAATGAGGAACTGCA640.10661868825695103No Hit
ACCACATAGGGGCATTTGTGATCAAAATAAATGTTTAAATCGCTAAAGGAAA640.10661868825695103No Hit
TATTAGGGGAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAA630.10495277125293619No Hit
TGTAGCGGGCATGATATGTTTTATAAGATGGATTGATTTATGCACCTATATA630.10495277125293619No Hit
TTAAATGGGGTGAGCTCAGTGGATTGCAGTGGTGTGCTGGTGATTTTGCACA630.10495277125293619No Hit
ACAAGAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA630.10495277125293619No Hit
GTAAACGGGAGAAAAATATGTGTAAAATAGGGAAGAAAGTTAGTATTGGATC630.10495277125293619No Hit
TTGACTGGGCTGAGAAAATCTACGTATAGAAGTCAAGGTCTGGAAATGTATT630.10495277125293619No Hit
TTTTAAGGGGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGT630.10495277125293619No Hit
TGAAAAGGGTCTATGGATGTTTTTGAATTCAGAAAGTAGCTACACTAGCCAC630.10495277125293619No Hit
GCTCTTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA630.10495277125293619No Hit
GCATATGGGAGGAACTATAATTTCTATTTTACGAAGATTTTAAAAAATCAAG630.10495277125293619No Hit
TCCCAGGGTAATTTTAGGGTCAGAACCTTACAGCCAAGATAATCTAAATATT620.10328685424892133No Hit
GTGGCATTTTATCAAGTTACCAACATACGCATTAAAGGAGTTCCAGAAAATG620.10328685424892133No Hit
CTAGTAGAGGGCAGAACAGGCTTGCCGAACCCTGTAGCATAAGTGGTTACTG620.10328685424892133No Hit
CGGCGTGGGTAACCTAATTTAATTTAGGCTTAAATTCCTCTGATTAAGCATG620.10328685424892133No Hit
GCCAATGGGGAACGTGTAGAAACCATGACAGTGGTATTTAGAAACAAAAATT620.10328685424892133No Hit
GGCGTGGGGCATGAAAATTATGTTGTAGGGCTGTTTGTAGTATTCTTCTCTT610.10162093724490645No Hit
CAGCCTCGCTATTCATTAACTCTAGCCCTTGAACAATTTACCTATCTCTTAG610.10162093724490645No Hit
GCTGCCGGGATTGTGTGGAAGGGAATATGGTGAGACCCTTATCAGTAAGGGA610.10162093724490645No Hit
GACAATGGGGCTCTTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAAT610.10162093724490645No Hit
ACATTTGGGAAGAGGTGGGTTCCCCTGTTCTTGAGCAGCTCCGCTTCTGTGG610.10162093724490645No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)