FastQCFastQC Report
Sat 31 Dec 2022
SRR5848909.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5848909.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121220
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACGACACAAAATCTCGTATGC8160.6731562448440851No Hit
CTTATACACATCTCCGAGCCCACGAGACGACACAAAATCTCGTATGCCGTCT7450.6145850519716218No Hit
TGTGTTGGGATGCTTGCAAACAAATTTTCATGTCCAGTTTGTGCTCACCCAT1670.13776604520706154No Hit
GCAAGAAACAAGTCAACGTCAAGATATTTGGGAATGATTTCAAGAGACTTTG1670.13776604520706154No Hit
GTCGAGGGGACTAAAAGACCTTCTGGATGAAGTAATTTTACTAATTTATTCC1640.13529120607160536No Hit
CGTTATGGGAAGAATATGCATCTTTATTGTCTTACCAATGATTAATATTTTT1620.13364131331463455No Hit
CAGCTTGGGGGCAGTTTGAATCGCGGTGCGACGAAGGAGTAGGTGGTGGGAT1610.13281636693614915No Hit
GTACCAGGGTCAGTATTTTCAAGGCTCTAACCCGCCTTCATCCAATGTGTGG1580.13034152780069297No Hit
TTGACGCGGGTAACAGTGCTCAAATTCAACTAGGTCTTTCAGCTTTTTATAC1580.13034152780069297No Hit
CAACTGGGGACTGGCGGGAAGGAGAAATTTTTATTCCTGGGTTGCTGAAAGC1580.13034152780069297No Hit
ACATAGGGGTTTTGCAGGGCCAAGATAATCTTGATTTCACAACCTGAAAAAT1570.12951658142220757No Hit
CTAATTGGGGGACTCATATAAATGATTTCTAGAGCGTTCCCAATTTCACATT1570.12951658142220757No Hit
ACAAACGGGAATTTTACTAATTTATTCCATGCAAAATATTTTTGTTGAACCT1560.12869163504372214No Hit
TGATTAGGGAGATCAGATCAAGCTACAGCTCTACAACCAGCAGCACCGGGCT1530.12621679590826596No Hit
GAATCTGGGAACTTAGGAGGCAGCAATCCTAATAGTCCTTCAGTGCATTTTA1520.12539184952978058No Hit
GTACTGGGGCAGAATGTATTTGCTTAAGCCGGGTTTTATAGCTTGATTTTTC1500.12374195677280976No Hit
TTATTGGGGGATAGTAAGTACAGAACAGTAAAGTTAAAACGGATGTCTCCAT1490.12291701039432437No Hit
TAACGCGGGATAGAATAGAAACAAGGGACATTGCCCATCCAATTCTAGAGGA1490.12291701039432437No Hit
CTGGCTGGGGGGATGTTTCAAGAACAGTGAGTGAATTGGTTAGGCTGGAGTA1460.12044217125886816No Hit
TTTCACGGGGGCTCTTCCGATCTCGGTGCGGGGGAGCCGGGGAATGTGAAGA1460.12044217125886816No Hit
CCAGCATTAACATCAAATGGACCTTCAGTCTGATAAGAAGAAACACTTACCA1440.11879227850189737No Hit
GGTGCGGGGATATCGACCAAATGCCTGTGAAGAAGCATTAATTAATGGATCT1440.11879227850189737No Hit
GGTGCTGGGACGAGGGGTTTGGCCGCAAGCAGCACAAGGAGCTCTGGGCCCA1440.11879227850189737No Hit
AAGGCAGGGGAGACAAGAGAGCACAAGACTAACTTTGGTCTCTTGATCTTTG1440.11879227850189737No Hit
GAGAATGGGGACTCGTGTCTCGCTACCAGCTCCCCGCTGCCCTGCGCTCGGC1430.11796733212341198No Hit
ACACGCGGCTGATCCAGGGATCAACCACAATGGTTGATTTTGAGAATATCTA1420.1171423857449266No Hit
AACATAGGGTCCCTCCACAAAACTTCCACTTCTTCACATTAAAAATGATAAT1420.1171423857449266No Hit
TGAATGGGGTCCTACTTATTATTTTAGAGGGATTTTAATTCAATGATCAAGC1410.11631743936644118No Hit
AGCATCGGGATAGCATTTAGTTTAAAGTGAAATTTGCTCTGACAGGGCTGGC1410.11631743936644118No Hit
GCTGCTGGGGGTGGTGTTATTCCGCAGTGCTTTCAGTCTTCCATGTGAGCTC1400.11549249298795577No Hit
TCGCCTGGTGTCTAGCTGCCTATTTAACATTTTGTCTTTCATTTCAACCTTA1400.11549249298795577No Hit
TCACCAGGGAGGCGCCGAGAGGGCGGGCCAGGGCCGCACTCCGGAGACTCGC1390.11466754660947039No Hit
CTACGTGGGGTGAGGGCCTACCTTGAGTCACCCCCAAGTATAAACTCAGATA1390.11466754660947039No Hit
TCTGTAGGGGAACAGCTTTCTGTAGCAGAGATCACCAATGCTTGCTTTGAGC1370.1130176538524996No Hit
CAAAATGGGTGTCTCCCTTCTTGTGCAGTATCTCTAAGTGCTGAGAGGAGGT1370.1130176538524996No Hit
TTGTGCGGGTACCACTAAAATTGATGAGAATTCTTGTCTCCATGTGTAATTT1370.1130176538524996No Hit
AGTATAGGGACAGGTTTAGAGAGTTTTTTGTTTTTCTTTTACTGTTGGAAAA1370.1130176538524996No Hit
GCCGCCGGGACATATAGCAGAGAGAACTATGTAAATTATCTTGCAGAACAAA1360.11219270747401418No Hit
TCAGTTGGGATGTCACATTCTCAAGAAGTATTGAAAATCTCTATTTTGGTAG1350.11136776109552879No Hit
ATGATTGGGGACTCGCGTCTGGCTACCAGCTCCCCGCTGCCCTGAGCTCGGC1350.11136776109552879No Hit
AGAACAGGGAACTGGTGATTTAGTTTTATATTTAAGCTACAATTAATCTTTT1350.11136776109552879No Hit
CTCTAGCCGGGAATTAAATGGATCAGAAGGTGTGATTGGAAGAGGTGAGAAG1340.11054281471704339No Hit
ATCAATGGGGTATTTCTCAGAATCCTCAGAATCCATTCTTGTTATGATGGTC1340.11054281471704339No Hit
TTGGGTGGGGAACAGCTTTAGTCATGGAATACTGGGAGAAGGAATAACTTTC1340.11054281471704339No Hit
CACGGTGGGATGCAAATGGACACCAAAAACGAGCTGGGGTAGCAATTCTTAC1330.109717868338558No Hit
GCTACAGGGTAGATGGGTGAAAAAAGAATGAGGTTCAAGGGAGCGTGCACCA1320.10889292196007261No Hit
AATTTAGGGTATGGAGACAGGTGGAAACCAAAGTTCGAGCTAAAATCCGTAA1320.10889292196007261No Hit
ACAATCGGGATTTTAGGTTAAATCTGATTACATAAATGCATTCCCATATCCT1320.10889292196007261No Hit
GCTATAGGGGATACTAGAAAGAAGAACCATGCTGAGAATTTGCATGTTATAG1320.10889292196007261No Hit
CAAATAGGGCAGCTCACTGCATCTCCGCCTCCCAGGTTCAAGCGATTCTCCT1320.10889292196007261No Hit
CATATAGGGAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTT1310.10806797558158719No Hit
TCAAGTCGGGATGCGCCCCACCCCCATGAGCCAGTTCAGCCCTACTGGGGGC1310.10806797558158719No Hit
AAATTAGGGCACAGCCATTGTATATTGAATCTGTCAATACTGAGCAAATAAA1310.10806797558158719No Hit
TTCAGAGGGGAAATGAGTGAGTCAAAGAAGGGAGTCCTAATATATCACCAGA1310.10806797558158719No Hit
GCAAACGGGGAATTAACATAATGAAAATGCTGAATATCCAGATTAGTGAAAT1310.10806797558158719No Hit
TAAGCAGGGATGATTACATCAAAAAAGTACTAAATGGCACATAATTAGGAAC1300.10724302920310179No Hit
CAAGTTGGGAGGAGAAGGTTCAGCAGCCTGACTAAAATTTGGCTATGCAAAT1300.10724302920310179No Hit
GGAAATGGGTGCGTATATAATTTTATAACAGTGCCTATTCCCCCATGTTGTA1300.10724302920310179No Hit
TTTTCTGGGGTGAGCACACCATATATTTACAGTAGGAATAGACGTAGACACA1290.1064180828246164No Hit
GATGTGGGGCATCTCCCACTATGCCTGTTAGCCTAGAGGAGTCCTGCCTGTA1280.10559313644613101No Hit
TAATAAGGGAAGTTTACATTCATTGTAATCTGTAGGTTCTTTGTCCTCATCC1280.10559313644613101No Hit
GCTCAAGGGTCTCTAAACGGGGCGTCCAAAGTGGCTGGAATTGAAAGTGAAC1280.10559313644613101No Hit
GACCGGGGGATGAACATGCCGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCC1270.10476819006764561No Hit
CTAGATGGGATTAGGCAACATCCATCATAAACCAGGTAGCCCTGTGGAAGGT1270.10476819006764561No Hit
AAGCATGGGCCTCCTACACTGTGTTTTGGATGATTGGTGATGTCTTGGATAT1260.10394324368916019No Hit
GACAGTGGGCTCTGCTCTAAAATTGGTGTTTGGGTGATCAGAAGCAGGTAGC1250.1031182973106748No Hit
GTGGCCGGGTCGTGCCGGGCTCCAGAGCTCTTTGTTCTCATGGGTGGCACCT1250.1031182973106748No Hit
ACCACTGGACAGCATGATTCAAAGACTACAACAGGAGCAAGACCTGAGACGT1250.1031182973106748No Hit
TTTGGCGGGATAGCAGCATGATTTATAATCCTTTGGGTATATACCCAGTAAT1250.1031182973106748No Hit
TATGTAGGGACAAGAACTTTTAAATCTGGGATATAAATTAAAGATCATATGC1240.10229335093218941No Hit
ATTATAGGGTCACATGTGACTGGTGCTTTCACACTTGCCACTCTGTCTTTCT1240.10229335093218941No Hit
TCCACTGGGGACAACATTTTTGTAATTTTTTCCAGGCAATGTTTTTTGAGGT1240.10229335093218941No Hit
CGTCCGGGCACCTCTGTTTAAACTTAAAAATAGAGACAAGAAAATGTTGAGG1230.10146840455370401No Hit
AAGTTAGGGATATCTTCTTCGAAACCACACTTATCCCCACCTTGGCTATCAT1230.10146840455370401No Hit
GTTGCTGGGTGTGCCAAACTAAATAAAAGGCAATGGGCCATTGCGTTTGGGT1230.10146840455370401No Hit
GGGACTACAGGCTCCTGCCACCACGCCCGGCTAACTTTTTGTATTTTTAGTA1230.10146840455370401No Hit
CACACGGGGTACAAGGGGGTTGCTCCTCTCTGGATGAGACAGATACCATACA1230.10146840455370401No Hit
GTTTCAGGGATGCCAAAGAAGGGAGGGAGCTTTTGTTGTCTGGAATGAAAAG1230.10146840455370401No Hit
CGTAGTGGGAAGTCTTTCCATTCTGGCTTGTTGGAAATTGAATGTCTAGGTG1230.10146840455370401No Hit
TAACTTGGGTCGTTTTAGTGTTTCTGATTTCTCATTCCATAATGGGTGACCT1220.10064345817521862No Hit
GTATCTGGGATGAAGTGACTTATTAGCCATTCAGCGTATTAGTATTACAGAG1220.10064345817521862No Hit
ACTACCGGGGTCCTTTCCTTCACTGATTTGCTTTAAAAAAAATAAAAGATAA1220.10064345817521862No Hit
ACCCCAGCTCCCACCAGCACATCTGCATTTTAGCCAAGGGAAAGAAGGAAGG1220.10064345817521862No Hit
GATCATGGGAGTCCTGCTGCAGTTGTGCAGCAGAGGAGACTGCAGACTTCGG1220.10064345817521862No Hit
TGCTATGGGATTTATATCAATTCTTCTTTACATTCACACACAGTTTGTGTCT1220.10064345817521862No Hit
AAATATGGGCTGAGAAATGGTGCAGTTCTGAAGATAGATGGACAAAACCTGC1220.10064345817521862No Hit
CGTTTAGGGACTCAGGTCCAACTAGGGATACAGAAACACTGAATATTTCAAC1220.10064345817521862No Hit
AAGTTAGGGTGTACACCACATGCAGTTTACATCTGTCTTAACTACTCCTTCC1220.10064345817521862No Hit
TCTATTGGGCATTTGTTTGGTTAGCCACACGGTTGAGCACAAAACAATGTGT1220.10064345817521862No Hit
TGCCAAGGGCGATCTATAAGTGGGGTATTAAGGATAAATTAACATTTGACCA1220.10064345817521862No Hit
TCCTATGGGTCTTGCACGGGGGTTTATGATTTCAAAACCACATATGACCAGA1220.10064345817521862No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)