FastQCFastQC Report
Sat 31 Dec 2022
SRR5848897.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5848897.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71238
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACCTCCAGGTATCTCGTATGCCGTCT4590.6443190432072771No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACCTCCAGGTATCTCGTATGC4080.5727280384064685No Hit
GATCTAGGGCTTACATATAAAACTAACAAAACATGCACAGAATCTGTATGAT1310.1838906201746259No Hit
TAAGCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1140.16002695190768973No Hit
GCGCTGGGAGGCACAGCTGAGTCCGGAGCAGACTGAGCCACCTAAGAGGGGA1120.1572194615233443No Hit
TAACTCGGGAAGGGGCCAATTCTAAGTATTCTTCACGGCAGCCAGAAGTTAA1090.15300822594682612No Hit
GTCTGGGGGAACTCTTTCTTGTATCTTGTCTCTTTAGAGAAGGAAATTTTTG1090.15300822594682612No Hit
ACGCTGGGGATCCTCACGGAACTTTCATTCTAATGGGGGAAGACTGACTATA1090.15300822594682612No Hit
CAGTCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1060.14879699037030797No Hit
TTGTGAGGGACAGTAAGGTAAGAGAAAGAGAAAGCAGGAGGGAGAGAGGAAA1040.14598949998596256No Hit
TGGCTTGGGGAGTCAGATGCTGTGGTACTTGGCATTTAACAACTAGAATTCA1020.14318200960161712No Hit
ACACTTGGGCAAGATTTAACTCTTACTAAATTTATAACAGTATTGGACCATT1020.14318200960161712No Hit
TTACTGGGCAGGAAGCATTTTAGCAAAAGCTCAACTGGAGGTTACTGATGGT1010.1417782644094444No Hit
GGACTAGGGTGCCAAATCACCTGTCAAAGTAGTTGCAGCTTTTTGTATTTCT1000.14037451921727168No Hit
TTTGCGCGGGAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTT990.13897077402509897No Hit
AGGTAAGGGCGGAGCACTTGCTCTGAGGAATCCCAGGGTGACTCTGTCGGGG980.13756702883292624No Hit
ATACACGGGATGCTCATCAATGGCGGATCAGAGAGAAAATCCTGCTTCTGGA980.13756702883292624No Hit
ACGACTGGGACACGAGGGCTTTTGTATTGTTCTACTTTTTCAGCCCTTTACT970.13616328364075353No Hit
CTTTATGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC970.13616328364075353No Hit
TAGTAGGGGAAATCTATATGTGCTGGAATACTTAGAAATAAAAGTTTTGTTT960.1347595384485808No Hit
CTGTTTGGGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCG950.13335579325640812No Hit
CTCAAAAGGGCAAATCTGAGTTATTGGCCTTGAAGAGGAGATATAGAGAGAG940.13195204806423538No Hit
TCAATTGGGAGAAGATTTATTCTGTTAATTTTTGGTCTTCATAAACCTAACT940.13195204806423538No Hit
TTCACAGGGAAGTGTCTTGGATTTGTGGCTACCTCTGTTGGACTGTCCAGAC940.13195204806423538No Hit
CTACAAGGGCAAAAAGAAATAGAAACACTTCATTAACTTTGTGATTGCCAAA920.12914455767988994No Hit
GTCGCAGGGATGCTGACTCACTGGTACAAACAGCTGTTGAAGCTCAGAGCTG920.12914455767988994No Hit
GTGCCCGGGACATCCCACCATGGTGGCTCCTCCCACCTCCTCTGGATTTGTT910.12774081248771724No Hit
AACACTAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC910.12774081248771724No Hit
TGTTCTGGGCAAACTCAATCGGGGACTAAAATTTCCCACTGAAAATGTTAAA900.1263370672955445No Hit
GATAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA900.1263370672955445No Hit
GTAACGCGGGGCCATTCAAATGCCTCCTAACTTTTATAGTTATTTTGTTTTA890.12493332210337181No Hit
TGATCAGGGATAGTTTGAAAGAACCAATAGTGTATTACAGGGAGTTTAATTA890.12493332210337181No Hit
CGTTCAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA890.12493332210337181No Hit
ACTAAGGGTGTTATAGGAAAACAACTTGGTATTTAAGTATGAAGTGGATGAA880.12352957691119909No Hit
TTTTTTGGGCCACCACAAGGATGACCCTCCTCCTCCTGAAGATGATGAGAAC880.12352957691119909No Hit
ACTACGGGGACCAAGCAAGACTCCGTCTCAAAAAATTAAAGTTCGTGATACT880.12352957691119909No Hit
ATCAACGGGTATGTTGAGTTTTTGTTTGTCTTGGAGTATTTTCTAATTTGTC880.12352957691119909No Hit
GTCAAAGGGGGAGAAAAACCTTACAAATGTAATGAGTGTGGCAAATCCTTTA870.12212583171902637No Hit
AACTTAGGGACTAAAAATGAGACAGAAAGGTGAATATTTGAGAGTAGCAGAG870.12212583171902637No Hit
CAATAGGGGGCCCGCCCCTCTATGGAAAGTAAATGGTAGCTCGGAAGGGTCA860.12072208652685365No Hit
CATGAGGGATAATTGTTTGACCATACTGAATCATTTACATTGTCTAATCCAT860.12072208652685365No Hit
AACATAGGGACGCTGCCGCCATTGCTAGTAGCCGATATTTCCTCCCACCCCC860.12072208652685365No Hit
TATCATGGGAAGAGCAGCTTTCATTTGTTTTGATGAATAACCATATTTTCCT860.12072208652685365No Hit
TGTCCAGGGATTTGGGGAAGGAAAAGAAAGTAGTTGTTTTACAAGGGAGGAA860.12072208652685365No Hit
CGCCTCGGGATAGTGCCTGGACTTATTATCTATGGTAGCAGATGTTGAGTGT860.12072208652685365No Hit
TTCGTTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA860.12072208652685365No Hit
GAACTTGGGTGTGAAACCTTGCTGCAAGCACAGCCCTTATGCGGTTAATTTT860.12072208652685365No Hit
TAACTTGGGCAAAAGAAAAAGAAGAAAAAAACTAAAAAGATATTTGATATTG860.12072208652685365No Hit
TTAGCAGGGGAATGAAAAAACAAAAAGTAGGAACCAAACATAAAAGGTCTAG850.11931834133468093No Hit
GTAGCGGGGGAAACAAAACTAAACAACAAAACCCTAGGAAAAGAATGGCTTC850.11931834133468093No Hit
TTTTCTGGGAGCGCCTGACAGAATCTCCGTGTGCTTTGGTGGCCAGCCAGTA850.11931834133468093No Hit
GAGAGCAGGGAAGCTGTCATGGGTGGGTCCTTGGGGAACATGGAGATTCCAG840.11791459614250821No Hit
GTATTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA840.11791459614250821No Hit
TACACCCGGGCATGAAGAAAATTACATCAAGGCACATCAAAGAAGCAGCCAT840.11791459614250821No Hit
AGCCAGGGGAAAGTAAAAGCTACCAAAGTGGGAATTCAAAATTATAACATGT840.11791459614250821No Hit
CAGCTCGGGCGATCTGACAGCGGGCCGAGAACCTAGCTCCCGTGAAGAACCA840.11791459614250821No Hit
ACATCAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA830.11651085095033549No Hit
GCGGTAGGAAGGAAAAGACTGCCCTATCTCCTGGAAGAAGAGAATCAAAATA830.11651085095033549No Hit
TTCACAGGGACGTGGCAGATTAAAAACAGCAAAGTAGAAAGGAGCAGCAGAC830.11651085095033549No Hit
GTAGAGAGGGAGCAGTCTTCTCAGTAGCCCAGAGTTTCCAGGAAACAGGAAT830.11651085095033549No Hit
CATACAGGGACCACTGAACCCTAGACATATTAAGCTGATGGCCATCTCTATA830.11651085095033549No Hit
TTTTCGCGGGGTACGCAGGGGATATGAAAAAAACTGTACTGTGTTAGCACTA820.11510710575816278No Hit
TACAAGGGCGTGGAGATAATCAACACTCAGGACCTTCAGCCTTGAACGCCCA820.11510710575816278No Hit
CATATAGGGGTTTCAGATCCAGAATCAAATCCTCACATTTAGATTTGACCTT820.11510710575816278No Hit
GGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTT820.11510710575816278No Hit
GTTGCTGGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG810.11370336056599006No Hit
GTTACAGGGCGGACACATTTATTGAATAAGAAGCTCAAGAATATACTGATTA810.11370336056599006No Hit
TCATATGGGGAATTATAAGGAGTCTCTATTGTTCTTTCATTTTTAATTGTAT810.11370336056599006No Hit
TATTATGGACCAGCACCTATTGAGCAATGTCTATTATAGTAATTTTGCATAC810.11370336056599006No Hit
CATTTTCCCAGGGAGATGAATAAGCGTCTAACAGAGGAACAAGCCAAGAAAA810.11370336056599006No Hit
TATAATGGGAACAGTGCTCAAATTCAACTAGGTCTTTCAGCTTTTTATACAA810.11370336056599006No Hit
TGCACTGGGCGATCTCAAAGCGGGGAAAAAAGCCTTTCAAAAGTTTCTCACC800.11229961537381734No Hit
TTATATGGGTAACTGAAGCAATTTCTAAGTAAAGTGCTGAAATGGTGGCTTG800.11229961537381734No Hit
TAGCTTGGGGACAGGATCTTGCCATGTTGCCTAGACTGGTCTCAAACTCCTG800.11229961537381734No Hit
CAGATAGGGCCATCAAGCAGTCGCCTTCCACCTTAGAACCTGTTCACAGTTA800.11229961537381734No Hit
TAAGACGGGGATAGTTTTACTTCTTTTGTGATTTGGACGACTTTTATTTGTT800.11229961537381734No Hit
TACATGGGATGTTTGGATTGCAGAAGAATTTGTAAGATGAATACTTTTTTTT800.11229961537381734No Hit
GATAGAGGGGTCATGATTACTTTTATAATATATTTTTCCGACCTGTCTAAAA800.11229961537381734No Hit
ATAACAGGGCAAGACCAGAATTGGAGAGCTAGTCATGCCCTTTCCTACTAGA800.11229961537381734No Hit
ACTCTTGGGAACTGTTGCTCCTGTGAAATTTGACAGTGAGATTCCTTCTATT790.11089587018164462No Hit
TTCTTGGGGATTACCACCTGAGCTTGGCCTCCTGTCAGATCGTCTGTGGCAT790.11089587018164462No Hit
TCAATAGGGTGGTCATTGCATCGAAATGTACATTGGTGATTCTGAAGCTTAT790.11089587018164462No Hit
GCGCCAGGGAACAACTGCATCTCTCTCACCCAGATTCACTAATTGTGAATGT790.11089587018164462No Hit
CTTTACGGGAATAAATGAAAAATAGAGAGACATACCTGGCTCCAAAACAAGG780.1094921249894719No Hit
GCCTATGGGCGATCTTCGGCGGGGTCTTCCAAACTCCTGTTAATGTGAATAT780.1094921249894719No Hit
TAATACGGGACTTCTGGAAGAGGAGAACAAAGAACGTGCTAAAAGAGAAATG780.1094921249894719No Hit
TCCACCGGGGAATACAAACGTTTTTGCAGGTTCTGCTGTGAAATGTGGTTTG780.1094921249894719No Hit
GCGACAGGGAGATGAAAATACCATAGATTATCATAATGAGGGCACTTGCCCA780.1094921249894719No Hit
TCACGCTGGGATAGAGAAAGTGATGGGGCCTCCGATGAAGCAGAGGAAAGTG780.1094921249894719No Hit
TAGCAAGGGGTGCATAAGAAGCCGAATGAGGAAGACAAACATAAAGATGAAG780.1094921249894719No Hit
TGGCCAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA780.1094921249894719No Hit
CAGTGCGGGGATCAATGCACATCAGAGTGACATAGCCTGTGTGTCTCTAAAC780.1094921249894719No Hit
CTCGTTGGGCTGAGTAAGCTGCCTGGACCTGCTACCACTGATACCTGCCTAC780.1094921249894719No Hit
CCCCCCAGGGATATGTGGTGCCTGTCATAAGCTCCAGAGAGCTGCCTTCCAC780.1094921249894719No Hit
TAAAACGGGACAGTGGCATGTGGAGACAACAGTGTGTCCCAATGACTTTTCT770.10808837979729918No Hit
AAGTCTGGCTACGTGCGGGATTTAATTCATCCAGTAGTTATTCAGGAGCATG770.10808837979729918No Hit
TTGCAAGGGTGAAGCCAAGAAGGAACCTGATCTAACTTAGGTTTTAAAAGAA770.10808837979729918No Hit
TTTAAAGGGCTAGGCACGGGGAAGTTCTAAGAGATTTAGAAGCTCTTTGTCA770.10808837979729918No Hit
CGCATTGGGACTCATGTTTATGTTGTGAGCATGTAGAAACAGTAATGCTAAT770.10808837979729918No Hit
AGTTGGCGGGAAAGACGGATAATTTGCCTAGTGGGATTGGGCCTGGTGGTCT770.10808837979729918No Hit
CGCGATGGGGTCTTTCACCATCTGAAGCCCACTAATTTGTCTTTTATATATA770.10808837979729918No Hit
GTACAGGAGAAAAAATGAATGACTAAATCATTCCTATGATGACAGAAACCAG770.10808837979729918No Hit
TGCATGGGGATGCTTATAAAAGAAGTGATGTATCAGTAATGTATCAATAATC770.10808837979729918No Hit
ACCACTGGGCTCCACTTTATAAGAATGCCAAATCAAACTGTACCATTTTACT770.10808837979729918No Hit
TGTTTGGGGCTGCAGCAAGTACTGACCTAGGGAGCTGCAGGGTGTCAGCCTG770.10808837979729918No Hit
ACGCAAGGGACACCAATGCGGACAAGCTCCTAGAAGCAGCAGAGCAGTTGGC760.10668463460512646No Hit
GTGTACGGGCTGGTTTCCTTCCTGAGTCTGGCACAGACGGGGCTATTGTAGT760.10668463460512646No Hit
TGAGCAGGGGTTCTTAACACAGCTTCTCTTTCTACATTAAAAAAAATCATTA760.10668463460512646No Hit
AGTGATGGGGGAGGGGACCAAAAAGGGGCATCAACTCCAGCTGGATTATTTT760.10668463460512646No Hit
TACTCAGGGATACATTCTATTGCTTTAAACCTTATCTCTCTAATCAGCTTTG760.10668463460512646No Hit
TTAGCAGGGAAGACTAAAATCTAGTAACAGGTGTACCATAGTTCTTGAAACA760.10668463460512646No Hit
GGTTCGGGGAACTCTGACCAATGGAGGATTATAATTTTTTTATTAGCTCTTT750.10528088941295377No Hit
TCACAAGGGCTCTGACTCACCTAGTCTTTTTAGTTTTATTATTTCAACAATC750.10528088941295377No Hit
TAATTGGGGAAGGATGTCAAAATAGTTCATGAAAAGATACTCAACATTATTA750.10528088941295377No Hit
GACGTCTAGGGGGAGGCAAACTTGGGGAGTGAGAAGCCAGCCTCCCAGAGGC750.10528088941295377No Hit
TAGCAAGGGGATCTAAGTCTGGGACTTATACACAGGTAAAATTAGTTTTTTT750.10528088941295377No Hit
GACAGTGGGATGGCAGGTGTTGACTCTTTTAACCTCCTTTGTTGAATTTTAA750.10528088941295377No Hit
GGGACGGGACTTCAACCAGGAACTCTACGGGAATTTCAGCGCTGCCTCCCGC740.10387714422078105No Hit
CTGCCAGGGAATATACGATTTTTTATGAATGTTTTTCATTTAATAATTATGA740.10387714422078105No Hit
AACATAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC740.10387714422078105No Hit
TCTATGGGGGTAGAAAGGGAGATTACCAAGCACTGACGTAGTGTTCAAGACA740.10387714422078105No Hit
TAGGTGGGGAAGTGGCCAACAGGTACAGTCATATGGAAAAATGTTCAACATT740.10387714422078105No Hit
GAAGCCTGGGAAAATTAGCACTGTAAAATAATATGTAAAGGACTTGGAATGT740.10387714422078105No Hit
TTGCCCGGGAATCACTGTTATTTTTTAAGTATTTGTAAAATTAGAAAAATTG730.10247339902860833No Hit
CCAGCAGGGGTAAAATGAAGATAGTCATAGTATATACCTTATATATGTGGTA730.10247339902860833No Hit
AATTACGGGCCATTCCCAGCTGCAAGTCCCTGGCGAGCTTCAAATCCAACGA730.10247339902860833No Hit
ACTTCGGGATGACTGAAATTGTTATGGACTCTTTCAGAAGCTTAGTTATTAA730.10247339902860833No Hit
GATCTAGGGCTTGCTTAAAATATTCAACCAATTGTGAACTCAGAGTTTTATG730.10247339902860833No Hit
GTTCAGGGGATTTAACCCTCACCTGGTGCAAATGCATCATGTAAATTTTGAA720.10106965383643561No Hit
ATGCAGGGTCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCGAGC720.10106965383643561No Hit
TTACGAGGGATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGT720.10106965383643561No Hit
ATATTAGGGATGCCTTAAGTTGCAGTCTCATTTTGATAATCATTTGCTTCCA720.10106965383643561No Hit
ATCACTGGGCATTTCTCTGTGACTGATTGGTTTGTCTCCCTCCCTTCCCAGA720.10106965383643561No Hit
CGCTTAGGGCAGTGATGTTTCTCATTAAACTCTTAACACTTTAAAACTGCTT720.10106965383643561No Hit
CATGGGGAGAATAATCATACTTCTTTTTGAAATGGAACTATGCAAAGTCTTG720.10106965383643561No Hit
TCTAATGGGGGGGGCGGGGAGATCCCAGCTACTAGAGGACGCCCGTTCCAAT720.10106965383643561No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)