FastQCFastQC Report
Sat 31 Dec 2022
SRR5848837.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5848837.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99220
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACCTCCAGGTATCTCGTATGCCGTCT7410.7468252368474099No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACCTCCAGGTATCTCGTATGC6910.6964321709332796No Hit
AAGGCTGGGACAGAATGGCAAGCTGGATAAAAAGACAAGACCTATTGGTGTG1580.15924208828865147No Hit
TGCATGGGGGAGCAAAAAAATAAATCAACAGACAAAGGTGAAAAGAAGCCAG1580.15924208828865147No Hit
ATCCAGGGACAGTGAATCAGATAAAGCGATCACACCCCAAGCACAGGAGGAG1510.15218705906067326No Hit
TATGAAGGGGTGGACAGCTGGCGAAACTTCCAAGCCAATACGAAGGGGAAGA1490.15017133642410804No Hit
TAGCAACGGGTAGACTGAGCTTTATGCACACAGGTGGACTGGGTGGTTATGG1450.14613989115097764No Hit
ACAACTGGGAGGGGGACCTCTATTATTATTTTTGCCTGTATTGACCATTTCT1440.14513202983269502No Hit
AAGACAGGGAAGGATCATCTATGTATTCAAGTAATTATTTTTTAGATAATAA1360.1370691392864342No Hit
AGCAACTGGGGATGAGATTTACCTTGAGAGTAAAGACGAAAGACTGGGAGGC1340.13505341664986897No Hit
TTTTATGGGCAAGACCATGATAAGGAATGAGGAAGTAACATAATGGAAGGAT1310.13202983269502117No Hit
GTCTTAGGGATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTA1310.13202983269502117No Hit
GATAAAGGGGACATCACATGCTCATGATTGGAAGAATTAATGCAGTTAAAAT1300.13102197137673854No Hit
GTCTAGGGCGCCGTGTACGCCTTCCACCTGTGCGAGGATGGGGCCGAGCCCA1280.12900624874017336No Hit
GGTTGTGGGGAGGCTCTACGGGAAGCAATGCCCAAGGTCGCAAAGTATGCGG1270.12799838742189074No Hit
GATAGTGGGTAACAAAGAGCACTAAGTTTTAATTTAAATAGGAGATTTAACA1250.12598266478532552No Hit
GCTAATGGGAGTGTGTGTAAGATTTTTACCTTCCTTTCTAAAGTTTTTTTTT1240.12497480346704293No Hit
CTGTCAGGGGGCCGCCTACTGAAGCCGGCGCTGCTCTGTGGGGCTCTGGCCG1230.12396694214876033No Hit
TCATCGGGATAATTTTAGATAATTTATTTCCAGTGTTTTCTGCATGTTCTCA1230.12396694214876033No Hit
GTCGGTGGGGACCCTGACTGTTTCTCCCTTGGGAACCTCACCATAGGCCAGA1220.12295908083047773No Hit
ATCCCCGCATCCACTTCCCTCTGGCCACATATGCCCCTGTCATCTCTGCTGA1220.12295908083047773No Hit
TTTTCTGGGCGTGAAGATCGAGCACGACTGGCGCAGCACCGTGCATGGCGCC1210.12195121951219512No Hit
AGAGCTGGGGGGGCGCGGGGAACTGAAAGCCGGAAGGGGCAAGACGGGTTCA1210.12195121951219512No Hit
GTATCAGGGAATACTGGAAAAAATTTAGGGCTTTGGAGTGAAATTTTAAAAG1210.12195121951219512No Hit
CTGTCAGCGGGATACTCATTCACTGTAGTTTATTAATGTCAATAAATATAAT1210.12195121951219512No Hit
AAATGGGGGGACTCGGGGACCTGGAGCTGACGCCTAGACACTTGTATTAGCT1210.12195121951219512No Hit
GTAGTTGGGCCTAAATAAATGAGCTGTTGGAAGAAAAGAATCACAGTACTTT1200.12094335819391251No Hit
TCTTTAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1200.12094335819391251No Hit
TCGTTGGGTAGCAGTGGATTTGTAAAAATTTTTAGTTTATAAATTACAGTCA1200.12094335819391251No Hit
AATTCAGGGATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT1200.12094335819391251No Hit
CGCAAAGGGATCCAGATCCAGGAGGCCGCCAAGAAGAAGCCAGGCATCTTCA1180.11892763555734732No Hit
GCGTAAGGAACCAGGGGGGCTGTAGTGGCTTCGTCTTCGGTTTTTCTCTTCC1180.11892763555734732No Hit
GGCCTTGGGGATGGGGATTGCAGTGAGCATGCTGACCTACCCCTTCCTGCTA1170.11791977423906472No Hit
TCAGTGGGGATCTCCGCATGATGAAACTTCGGCTCACTCCTTGGCGCCTGCC1160.1169119129207821No Hit
GTTCATGGGGAGGACAAAAAAAAGTTACATTTAATCTATGCATTTTTGCCAA1160.1169119129207821No Hit
TGGTTGCGGGGCACACCATATATTTACAGTAGGAATAGACGTAGACACACGA1150.11590405160249949No Hit
GAAGTTGGGAGACAGCTGCATTGTAAGAGTTCTGTCATGCAGTCTGAAAAGG1150.11590405160249949No Hit
ACTCTGGGGTATTCACAGCCTCCTCGAAGAATCACAGGGTTGGAAGGCTACA1130.11388832896593427No Hit
GAAAATAGGGGGATTGTTTGAAAGTCTCTAAGATAAGTTTAGGTCACCAAAT1130.11388832896593427No Hit
GTTTTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1130.11388832896593427No Hit
GACAAGGGGACCCTCTACAACATCACCACGGGTCTGTACCCCTTCGAAGGGG1130.11388832896593427No Hit
ACACATGAGAGTAGACTGGTCCCTTGATCAGAAGCATCAGCACATCAGCATC1130.11388832896593427No Hit
CTCGTAGGGACTTTTTAACAATGTTGGTTGTGTGTTTGATCATTATTTGTTA1120.1128804676476517No Hit
TTGTTTGGGCTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAAG1110.11187260632936909No Hit
AACTGAGGGGATCTGAGCTGGGGCATCTTACATGATCAAATCATCACAGAAT1110.11187260632936909No Hit
ACAGCTGGGTGAGGCTCAAGTTCGGCTAAAGGGAGCTGGCCTAGGAGCCAAA1110.11187260632936909No Hit
GGTTAGGGGAAGCCCAAGAAGTAAGCTGAGTTAAGAATGTTTTTCAAGTTCC1110.11187260632936909No Hit
TACTTAGGGATATTGAATGTTTAATAATATGTCACTGCCAGTATACAATTAA1110.11187260632936909No Hit
ACGCCGGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1100.11086474501108648No Hit
TGTAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1100.11086474501108648No Hit
AAAGCAGGGCAGCAGGGCTAATCCTTACATTGCACCACCCCAGCTGCAGCAG1100.11086474501108648No Hit
TTAAACGGGGTTTCTGAATTCTTCAAAAATGATTCGGAAAGCTTTTTTTTTT1100.11086474501108648No Hit
ATAATGGGAAGAAATAAAAGCATATGTAAAAAACAAAAAATGTATTATGAAA1100.11086474501108648No Hit
CACCATGGGGCGAACGGCGAGCAGCGGCGGCGGCGCGGAGAGACGCAGCGGA1100.11086474501108648No Hit
TTCTCAGGAATGTGTTCTTCTGGTAATTTCTGTAAGTTTTCAAATGAAATGG1090.10985688369280387No Hit
TCTTTCGGGAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCG1090.10985688369280387No Hit
CAAGGCGGGTATTGGGCAAGTTAAAGAGCATGATGAATGTTTGTACTATAAT1090.10985688369280387No Hit
CTGTAGGGAATATAATATGGATCAGAGCATTTATTTTGGGGAGGAAAACAGT1090.10985688369280387No Hit
GATGTTGGGGAGTCCCCCTTGAACGCACCTCAGGATGGCCCGTACTTTGGAA1090.10985688369280387No Hit
ACAGCAGGGATCCAAACTAAATTAAGTTAAGAAGTTAATTATAACTCCCAGA1090.10985688369280387No Hit
TAGCCTGGGGGAAAAATATTTCCAAGCCAGAATTCTAAACCTAGACAAACTA1090.10985688369280387No Hit
AACTCTGGGGCTACTTATTTTTTTTCTTTTCTGAAATGAAAACATGAATCTT1080.10884902237452126No Hit
ATTAGTGGGATGAATCTATTTTTGTAGTAACACTGAGATGATATTTCTCTTT1080.10884902237452126No Hit
TGAAAAGGGAATGTGTTTTCTTCCCAACACTTATTAAATATAAAACAACCTG1080.10884902237452126No Hit
GTACGGAGGGTGCCTTCCAGGCACGGCACCCCAGAACTACGGAAACAGTACT1080.10884902237452126No Hit
GAGCAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1080.10884902237452126No Hit
AGAATGGGTCTGATGTGGGGGGAATAAAAACATACTTGAACACAAATTATTT1080.10884902237452126No Hit
ACAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGG1070.10784116105623867No Hit
TCGCGTTGGGAACCAAGGTACAGTAAACCAAGGATGGAAATACATAAATTTG1070.10784116105623867No Hit
AGACCAGGGCACAGTACTTTCCAGCAGTCAGTCCCTGGTTCCTAGATGTGTT1070.10784116105623867No Hit
GTAAGGGGGGTCTGTGCCCGGAAAGTTTGGCATCATTCGTCCAGGCTGGTAA1070.10784116105623867No Hit
CCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCGCAGCCTATTCTTCC1070.10784116105623867No Hit
TAGGTTGGGGAAAGTCCAAATGAATATAGGTGAAAATGCCAAATTACTTTAA1070.10784116105623867No Hit
GAATATGGGTAAGGTGGTGAGACTAGGCATTCGAGGCCTGATTGAGCAACAT1070.10784116105623867No Hit
TTTCATGGGAATTTAAAACAATCCTTTCATCCTCTAGGCAAAAATTTACATC1070.10784116105623867No Hit
TATAGCGGGTATTTATTCTAGCCACCTCTAGCCTAGCCGTTTACTCAATCCT1060.10683329973795606No Hit
GACACACGGGGATCTGGTTACGGGATGATATAGAGATTATAGAAGTTAAGTA1050.10582543841967346No Hit
TTCGTGCGGGCTGGTCACACTTATGCATCTATGGTCATCCAGCGGCTTCACT1050.10582543841967346No Hit
CAAATCCCTAAAGAAGGTCATGGATGACTTGGACCGAGCCAGCAAAGCCGAT1050.10582543841967346No Hit
TATAGTGGGATAGAAGAGCTTATCACCTTTCATGATCACGCCCTCATAATCA1050.10582543841967346No Hit
GCGCAAGGGAAGGTCAACCAGCAAATGATATCCTGCCTCTTGAAAACTTAAT1040.10481757710139085No Hit
GGGTGAGGGATTAATCCCCTGGCCCAACCCGTCATCTACTCTACCATCTTTG1040.10481757710139085No Hit
TTCTCTGGGAGGTTCAGCATAAAGACTCTGTGTGTTTCTTGTTAAGTCAGCT1040.10481757710139085No Hit
ATGAGAGGGAGTTTAAATTGATTGCATGTTACTGTCTCCCTTTTAGAGTCAT1040.10481757710139085No Hit
AATGCTGGGAGGGAGAAAAACTCCACTATGTCACATCTCTGTTACCACCTGT1040.10481757710139085No Hit
CTCTGCGGGGGGCAATGAGCCAGGTGCAATAGCTCATGCCTGTAATCCCAAC1040.10481757710139085No Hit
TAGTTTGGGGCAATGCAAATGTCTAATTGTCCCCCAGTGGGCATAGTCAGTG1040.10481757710139085No Hit
GTTTTAGGGACCTTGGAGGTGCTCAGAGAAGCGTGAAGTTTGCACTATGGTG1040.10481757710139085No Hit
CAGACCGGGATAAATTATTTGAAAAGAAACTTTTGTAGAAAGTCCAAGAATA1030.10380971578310824No Hit
CGTTGGGTAGGTGAACCTGGAAAAAACAAGCAAACAAAAACAGAATAAAATG1030.10380971578310824No Hit
TATGCCGGGACACCTCCCACTCATCTTCCATGTGATATTTCCTTTCTGCTTA1030.10380971578310824No Hit
TATAACGGGGGGCGTGGTGTTTAAAAGTCACAGATGGGGCACCCTCGGGCCA1030.10380971578310824No Hit
CATAGGGGAAGTTTTAAAAAAGGTTCTGTAGACAGAAAACAGTTGTTGCAAC1030.10380971578310824No Hit
TGATTAAGGGCAGCCGGGAATCTGGATCTGCTGGCTCCTAGTCCAGGGCCCC1030.10380971578310824No Hit
GGTAACGGGCAGTGGAGTTTCAATGATGGACAGCTGTGGCCAGCTGACATGT1030.10380971578310824No Hit
GACCTAGGGGAGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGCG1030.10380971578310824No Hit
GCTCTTGGGTCTGATAAAGGGATGAACAACTATATCCAACAATATGGAAAAC1030.10380971578310824No Hit
ACATGGGGGAGTTTTCTAACTCATTTTTTAAGTTTTCTAGATGTCTTATCCA1030.10380971578310824No Hit
AAACGAGGGATACATCTTTCTGAAAATTGCATTTGAGAATAAATGTCTGACA1030.10380971578310824No Hit
CCGTTTGGGCACCCACCCAGCATGGTCAGGCAGCCCTGCTGTGTGCCCGGCG1020.10280185446482563No Hit
AGCTTGGGGCACTTGATGATTGTGAGGAGCTGGTGATCAATGCTACAGCGAC1020.10280185446482563No Hit
GCATTAGGGGAGAAGTCGCTTAGCTCTTCGGTGGTTGTCACACGTCCGGAGG1020.10280185446482563No Hit
AAGCCTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1020.10280185446482563No Hit
TCGCTGGGAGGACACGGTGACTGGTTTCCTGCTGGGCGGCATAGGGGAGCTT1020.10280185446482563No Hit
CTTCTAGGGTGGCTTTTGGCAGGACCGCCTTCTCCGTGCACAGAATTATATT1010.10179399314654304No Hit
AGCGCAGGGACATGAATTAATTGTTTCTTTTTACAATTCATTAATTTATTGC1010.10179399314654304No Hit
TAACAAGGGGCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGA1010.10179399314654304No Hit
GATCCAGGGTTCATGGCATTATAGCTTTTGAAGAAAGGCCAGTGATCCAGCA1010.10179399314654304No Hit
TTCACTGGGTTCCAGCCCGCAGGTCGCCACGGCCATCCCTTTGCTCCCAGCC1010.10179399314654304No Hit
GCTATCGGGTCCAGATGTCCTTCCGAGGACTCGGCGTATCCGCCACCAGGGA1010.10179399314654304No Hit
TAGATGGGGGTGATTTAATCGCTATAGCTAAAATACGTCAAATATACGTTGT1010.10179399314654304No Hit
GTGACTGGGATAGATCAAATAAAAATAAAATGAAAAATTTTAATTTGTATCA1010.10179399314654304No Hit
CTTCGCGGGTCATCCGGGGTGTGCTCTAAAGAATATGGTAGTCACTGATAAT1010.10179399314654304No Hit
CGTTATGGGCACTGTGTAACAAGTCACTCAGTTTTATTTTAACTTTAGACGG1000.10078613182826043No Hit
GCCGCTGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC1000.10078613182826043No Hit
CGTGGTGGGCAATGCTAAAACTAATCGTCCCAACAATTATATTACTACCACT1000.10078613182826043No Hit
TGGTAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAG1000.10078613182826043No Hit
ACGTCCGGGAACCAGGGAAACTCTGGGAAACTCACTGGTAGGAATCCATAAA1000.10078613182826043No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)