FastQCFastQC Report
Sat 31 Dec 2022
SRR5848836.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5848836.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99753
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACCTCCAGGTATCTCGTATGCCGTCT7200.721782803524706No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACCTCCAGGTATCTCGTATGC6510.652611951520255No Hit
TAGCAACGGGTAGACTGAGCTTTATGCACACAGGTGGACTGGGTGGTTATGG1780.17844074864916343No Hit
AGAGCTGGGGGGGCGCGGGGAACTGAAAGCCGGAAGGGGCAAGACGGGTTCA1540.15438132186500658No Hit
TGCATGGGGGAGCAAAAAAATAAATCAACAGACAAAGGTGAAAAGAAGCCAG1530.15337884574900001No Hit
TATGAAGGGGTGGACAGCTGGCGAAACTTCCAAGCCAATACGAAGGGGAAGA1480.14836646516896734No Hit
GAAGTTGGGAGACAGCTGCATTGTAAGAGTTCTGTCATGCAGTCTGAAAAGG1480.14836646516896734No Hit
GGCCTTGGGGATGGGGATTGCAGTGAGCATGCTGACCTACCCCTTCCTGCTA1430.14335408458893467No Hit
AAGACAGGGAAGGATCATCTATGTATTCAAGTAATTATTTTTTAGATAATAA1430.14335408458893467No Hit
GCATTAGGGGAGAAGTCGCTTAGCTCTTCGGTGGTTGTCACACGTCCGGAGG1370.13733922789289546No Hit
CGTACAGGGGAACAGCTTCAAGCACTTGAGACACTTGGAAATCCTACAGTTG1350.13533427566088238No Hit
CGCAAAGGGATCCAGATCCAGGAGGCCGCCAAGAAGAAGCCAGGCATCTTCA1350.13533427566088238No Hit
TTTTATGGGCAAGACCATGATAAGGAATGAGGAAGTAACATAATGGAAGGAT1330.1333293234288693No Hit
TGGTAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAG1320.13232684731286276No Hit
CTGTCAGGGGGCCGCCTACTGAAGCCGGCGCTGCTCTGTGGGGCTCTGGCCG1310.13132437119685625No Hit
ACAACTGGGAGGGGGACCTCTATTATTATTTTTGCCTGTATTGACCATTTCT1300.13032189508084968No Hit
AACTCTGGGGCTACTTATTTTTTTTCTTTTCTGAAATGAAAACATGAATCTT1290.12931941896484317No Hit
GATAAAGGGGACATCACATGCTCATGATTGGAAGAATTAATGCAGTTAAAAT1290.12931941896484317No Hit
GATAGTGGGTAACAAAGAGCACTAAGTTTTAATTTAAATAGGAGATTTAACA1280.12831694284883663No Hit
AAGGCTGGGACAGAATGGCAAGCTGGATAAAAAGACAAGACCTATTGGTGTG1280.12831694284883663No Hit
TATAGCGGGTATTTATTCTAGCCACCTCTAGCCTAGCCGTTTACTCAATCCT1280.12831694284883663No Hit
GATGCAGGGCAAGGGTTCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGG1280.12831694284883663No Hit
ATCCAGGGACAGTGAATCAGATAAAGCGATCACACCCCAAGCACAGGAGGAG1270.1273144667328301No Hit
GTAGTTGGGCCTAAATAAATGAGCTGTTGGAAGAAAAGAATCACAGTACTTT1260.12631199061682355No Hit
GCGTAAGGAACCAGGGGGGCTGTAGTGGCTTCGTCTTCGGTTTTTCTCTTCC1260.12631199061682355No Hit
GCTAATGGGAGTGTGTGTAAGATTTTTACCTTCCTTTCTAAAGTTTTTTTTT1250.12530951450081704No Hit
TATGTTGGGATATGAAGGGAATTGTACATCATGCATTCTTTTCTGTTTGCCT1250.12530951450081704No Hit
TGTGCCGGGAGAAACTGAAAGCTGTATGTCAACTTTATAAACATAATTCAAC1230.12330456226880394No Hit
GCTATCGGGTCCAGATGTCCTTCCGAGGACTCGGCGTATCCGCCACCAGGGA1230.12330456226880394No Hit
TCTTTAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1230.12330456226880394No Hit
TCGTCAGGGGGGGAGTCAGTTCTCACAGTGCTGCTTTTTCTCACTGCAGTCA1220.12230208615279742No Hit
TTTTCTGGGCGTGAAGATCGAGCACGACTGGCGCAGCACCGTGCATGGCGCC1220.12230208615279742No Hit
CGTTGGGTAGGTGAACCTGGAAAAAACAAGCAAACAAAAACAGAATAAAATG1210.12129961003679086No Hit
AGTGATGGGGTAGGTGATTAAAATAATTTGAAGGCGATCTTTTAAAAAGAGA1210.12129961003679086No Hit
GTATCAGGGAATACTGGAAAAAATTTAGGGCTTTGGAGTGAAATTTTAAAAG1210.12129961003679086No Hit
CTTCGCGGGTCATCCGGGGTGTGCTCTAAAGAATATGGTAGTCACTGATAAT1210.12129961003679086No Hit
TAGCCTGGGGGAAAAATATTTCCAAGCCAGAATTCTAAACCTAGACAAACTA1210.12129961003679086No Hit
TTTCATGGGAATTTAAAACAATCCTTTCATCCTCTAGGCAAAAATTTACATC1210.12129961003679086No Hit
TCGCTGGGAGGACACGGTGACTGGTTTCCTGCTGGGCGGCATAGGGGAGCTT1200.12029713392078434No Hit
TAAGCTGGGGGACTAAACTGAAGTGTACTTTAATGATCTATTGCCACCACTT1190.11929465780477781No Hit
TCAGTGGGGATCTCCGCATGATGAAACTTCGGCTCACTCCTTGGCGCCTGCC1180.11829218168877126No Hit
GACCTAGGGGAGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGCG1180.11829218168877126No Hit
TCGTTGGGTAGCAGTGGATTTGTAAAAATTTTTAGTTTATAAATTACAGTCA1180.11829218168877126No Hit
AACTGAGGGGATCTGAGCTGGGGCATCTTACATGATCAAATCATCACAGAAT1170.11728970557276473No Hit
GAAAATAGGGGGATTGTTTGAAAGTCTCTAAGATAAGTTTAGGTCACCAAAT1170.11728970557276473No Hit
TCACATGGGTCCCTTCTTGGTTCAAAGAAAGTGATCCTTCCAAGCTGCAGTT1170.11728970557276473No Hit
CTGTCAGCGGGATACTCATTCACTGTAGTTTATTAATGTCAATAAATATAAT1170.11728970557276473No Hit
CCGTTTGGGCACCCACCCAGCATGGTCAGGCAGCCCTGCTGTGTGCCCGGCG1160.11628722945675818No Hit
GTCTAGGGCGCCGTGTACGCCTTCCACCTGTGCGAGGATGGGGCCGAGCCCA1160.11628722945675818No Hit
TTACATGGGGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACAC1150.11528475334075165No Hit
ACAGCTGGGTGAGGCTCAAGTTCGGCTAAAGGGAGCTGGCCTAGGAGCCAAA1150.11528475334075165No Hit
AGCTGGGAGGATTAATTAGAAGAAGCAATCTAGTTAAATTTCCCATTTGTAT1150.11528475334075165No Hit
GCCGCTGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC1140.11428227722474513No Hit
GAGCAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1140.11428227722474513No Hit
ACAGCAGGGATCCAAACTAAATTAAGTTAAGAAGTTAATTATAACTCCCAGA1140.11428227722474513No Hit
CGCTATGGGACAGAGGAAGAGACTTGATTTTGTTTTTTGTTTGTTTGTTTGT1140.11428227722474513No Hit
GACACACGGGGATCTGGTTACGGGATGATATAGAGATTATAGAAGTTAAGTA1130.11327980110873857No Hit
TGGTTGCGGGAACCAGCATTCGAGAAAGCCAGAACACTGAACAAAACCACAA1130.11327980110873857No Hit
AGAATGGGTCTGATGTGGGGGGAATAAAAACATACTTGAACACAAATTATTT1130.11327980110873857No Hit
AGCAACTGGGGATGAGATTTACCTTGAGAGTAAAGACGAAAGACTGGGAGGC1130.11327980110873857No Hit
AATTCAGGGATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT1130.11327980110873857No Hit
GCGCAAGGGAAGGTCAACCAGCAAATGATATCCTGCCTCTTGAAAACTTAAT1120.11227732499273205No Hit
CAAGGCGGGTATTGGGCAAGTTAAAGAGCATGATGAATGTTTGTACTATAAT1120.11227732499273205No Hit
AAGCCTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1120.11227732499273205No Hit
CTGGGTCAAAGTTCAGGACTGGGTTCTAGTGGGATGCGTTTGCTTGAACCCA1110.11127484887672552No Hit
GCTTACGGGGATCTCTTATAGGGAGGTTGATGACATCACAATTTATTTTACT1110.11127484887672552No Hit
AACTAAGGGGCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGA1100.11027237276071897No Hit
GTAAGGGGGGTCTGTGCCCGGAAAGTTTGGCATCATTCGTCCAGGCTGGTAA1100.11027237276071897No Hit
AAAGCAGGGCAGCAGGGCTAATCCTTACATTGCACCACCCCAGCTGCAGCAG1100.11027237276071897No Hit
CTCTGCGGGGGGCAATGAGCCAGGTGCAATAGCTCATGCCTGTAATCCCAAC1100.11027237276071897No Hit
GGTTAGGGGAAGCCCAAGAAGTAAGCTGAGTTAAGAATGTTTTTCAAGTTCC1100.11027237276071897No Hit
TATAACGGGGGGCGTGGTGTTTAAAAGTCACAGATGGGGCACCCTCGGGCCA1090.10926989664471244No Hit
GATGTTGGGGAGTCCCCCTTGAACGCACCTCAGGATGGCCCGTACTTTGGAA1090.10926989664471244No Hit
ATCCCCGCATCCACTTCCCTCTGGCCACATATGCCCCTGTCATCTCTGCTGA1090.10926989664471244No Hit
ATAATGGGAAGAAATAAAAGCATATGTAAAAAACAAAAAATGTATTATGAAA1090.10926989664471244No Hit
AAAGCCGGGGGCAGTGGTGCTGGGAGTGTCGTGGACGCCGTGCCGTTACTCG1090.10926989664471244No Hit
TCTTTCGGGAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCG1080.10826742052870592No Hit
ATTAGTGGGATGAATCTATTTTTGTAGTAACACTGAGATGATATTTCTCTTT1080.10826742052870592No Hit
GGGTGAGGGATTAATCCCCTGGCCCAACCCGTCATCTACTCTACCATCTTTG1080.10826742052870592No Hit
TGGTTGCGGGGCACACCATATATTTACAGTAGGAATAGACGTAGACACACGA1080.10826742052870592No Hit
GTTCATGGGGAGGACAAAAAAAAGTTACATTTAATCTATGCATTTTTGCCAA1080.10826742052870592No Hit
AAATGAGGGCCCCAGTCAAGCCTTCCAATGACTGTGGTCCCAGTTGACATCC1070.10726494441269936No Hit
TTGTTTGGGCTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAAG1070.10726494441269936No Hit
TTGCAGCGGGACCATTATGACACCCAAGTACAGCTGCCATCTATCTTCTCTT1070.10726494441269936No Hit
CAGTAAGGGGAGAGTACTTTGTGGAAGTCCAGAAGTCCAGCAGTGAAGTTCC1070.10726494441269936No Hit
GTCTTAGGGATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTA1070.10726494441269936No Hit
CGTTAAGGGGGGCTCTCTCTCTATTACTAGGTCAGATGGACCTTGTCATAAG1060.10626246829669284No Hit
TTCTCTGGGAGGTTCAGCATAAAGACTCTGTGTGTTTCTTGTTAAGTCAGCT1060.10626246829669284No Hit
TCATGTGGGATCCAATGTTAAATATAATTTTTGTTATAGTTACATTTTAAAG1060.10626246829669284No Hit
ATGAGAGGGAGTTTAAATTGATTGCATGTTACTGTCTCCCTTTTAGAGTCAT1060.10626246829669284No Hit
TGGGCAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1060.10626246829669284No Hit
GCAGCCGTCATGCCGGGGATAGTGGAGCTGCCCACTCTAGAGGAGCTGAAAG1040.10425751606467976No Hit
TAACAAGGGGCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGA1040.10425751606467976No Hit
AATAATGGGAGCTGACATTTATTAAACTTTGGATCAAAGATAATGTGATTCT1040.10425751606467976No Hit
TAGCACGGGCACAAAAGAACTGACAAAATATTTAGAACTAAATGACAGTGAA1040.10425751606467976No Hit
TTATTAGGGAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCA1040.10425751606467976No Hit
CGTGGTGGGCAATGCTAAAACTAATCGTCCCAACAATTATATTACTACCACT1040.10425751606467976No Hit
TGCAGGGTGCTAAATGAGTATTACAACTGGCTAATATCATTTTTTATATACA1040.10425751606467976No Hit
TCTTGAGGGGAATCACAAATGCTCAAGTTTGAAAGGATCTTCATGATCCTTT1030.10325503994867323No Hit
GTCAACGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1030.10325503994867323No Hit
TTGTAGGGTGATGACATTGAAAATGTGATCTTTTCTCTAGTTCACAGGGAAG1030.10325503994867323No Hit
TTTCCAGGGATTTTCATATGTGTATATAATATGTAATGATCAAATCAGAGTG1030.10325503994867323No Hit
TGTAACGGGAGCAAAACTGAATGTCAAAAGTACCTTCTGTCCACACACACAA1020.10225256383266669No Hit
AGCCCTGGGACTTCAAGTTCAGAGTTCTTTCTAATCTTTTCACTGCTATTCT1020.10225256383266669No Hit
CGTTATGGGCACTGTGTAACAAGTCACTCAGTTTTATTTTAACTTTAGACGG1020.10225256383266669No Hit
ACTCTGGGGTATTCACAGCCTCCTCGAAGAATCACAGGGTTGGAAGGCTACA1020.10225256383266669No Hit
AGGAAGGCTGATTGTCACTTCTAAGATGGAAAGTTTTTTAAAAATCAGGTTT1020.10225256383266669No Hit
TGATTAAGGGCAGCCGGGAATCTGGATCTGCTGGCTCCTAGTCCAGGGCCCC1020.10225256383266669No Hit
TGCGCTGGGTAATTTAATTTTTTCTTTATATTTGTTTTTCTGAATGTTTACC1020.10225256383266669No Hit
TCATGCGGGTATCCCCCATCAAACTATTTGGCTTCTGGTTTATTTTTCTGCA1020.10225256383266669No Hit
GTGACTGGGATAGATCAAATAAAAATAAAATGAAAAATTTTAATTTGTATCA1020.10225256383266669No Hit
ATGTTTGGGTGGGTGACAGAGCGAGAGTCAGTCTCAAAAAGAAATAAATAAT1020.10225256383266669No Hit
CCATTTGGGACTATTTTTTAACCAAATCAACAACAACCTATTTAGCTGTTCC1010.10125008771666015No Hit
GATTTGGGGGAAGATTCTCAGTCATATTCTAAAGAGTCTCTCTCTTTCCCAG1010.10125008771666015No Hit
TTACTTGGGCTCACACTCCATATTCATGTGATTGGCCTGTGACTTTGATTCT1010.10125008771666015No Hit
ACTAACGGGCTATCGAGGGGGATCATGAAGCACTTGCGGAAGCTGAATAACT1010.10125008771666015No Hit
CTTAGAACTTTGAAAACATGATATACAATAATGTTTATTTATTATACATCCA1010.10125008771666015No Hit
TGTAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1010.10125008771666015No Hit
TACTTAGGGATATTGAATGTTTAATAATATGTCACTGCCAGTATACAATTAA1010.10125008771666015No Hit
CTACAGGGGCACTTGCCATATATGTGCTGATTTTCCCCAAATTCCTATTTCT1000.10024761160065361No Hit
AGTATTGGGGTTGCTTTTGGTAAATAGTGATGCTGCGTGTGGTGGTTCCCAT1000.10024761160065361No Hit
AGGATTGGGTCAAGAAGGCCACACACAACAGACCTAAAGGAAAGGATAAACT1000.10024761160065361No Hit
ACGTCCGGGAACCAGGGAAACTCTGGGAAACTCACTGGTAGGAATCCATAAA1000.10024761160065361No Hit
AAATGGGGGGACTCGGGGACCTGGAGCTGACGCCTAGACACTTGTATTAGCT1000.10024761160065361No Hit
TGGACTTGGGTGATAAATGTACATGTACTTTACAGCAGAACACAAAAAATAT1000.10024761160065361No Hit
ACATGGGGGAGTTTTCTAACTCATTTTTTAAGTTTTCTAGATGTCTTATCCA1000.10024761160065361No Hit
AAGTGAGGGAAGACAATAAGATGTTTCTTATTCACTGTCCAGTGTCGGCAAG1000.10024761160065361No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)