FastQCFastQC Report
Sat 31 Dec 2022
SRR5848177.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5848177.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74718
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGTTGTCCCATCTCGTATGCCGTCT6830.9141036965657539No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTTGTCCCATCTCGTATGC6330.8471854171685538No Hit
AAATTGGGAACAACCTTTTACATTGTGACTGTGTTTGCATTGTCTAATGACA1510.20209320377954443No Hit
CGTCCAGGGAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCT1190.15926550496533634No Hit
GCGACTGGAAGGACAAGATGGAAAGAAAATACAGGGAAAAGTGTTCAGAGCT1140.1525736770256163No Hit
TCACATGGGGGTGGTATGTAACAAGAGTTACGTATCCAGGGGCTTGTGCCTT1130.1512353114376723No Hit
ATGTGGGGCACTTGAGTGTCACGAGGCAGAGCCTGGAAACATTAGCTTTGGA1130.1512353114376723No Hit
CTACTTGGGGAAGGGTGCTTTCACTAAGGTTATATTTTAAAGTAGAATAACA1110.1485585802617843No Hit
ATTTCCGGGGGCGCTTGGCCTCCCTAGTGCGGGCTGGCAGTGCGGGCAGAGC1100.1472202146738403No Hit
AGTCCAGGGGCCTTTTCATATCCTCAGAAACAGGAGCCACCAGAAATGGAAC1090.1458818490858963No Hit
AATCCTGGGAGGAAAAAAGGAAGATTGAACTAATAAAATTTTATTTCTTAAA1070.1432051179100083No Hit
GCTTAGGGGCACACGCATAAATTCACAGATAAAATTCTTAAGCATTTCAGGA1060.1418667523220643No Hit
GTTCTAGGGGCTGGTTCTGGTGAATGCTGTCTATTTCAGAGGAAACTGGGAT1060.1418667523220643No Hit
TTGACTGGGAGTGCTATTGATTTGTGTGCGTTGATTTTGTGTCCTGAAATTT1060.1418667523220643No Hit
CAGCAAGGGGCGGACGGGAACCAACCCCACAAAAGTGCAAATAATCCTCAGA1050.1405283867341203No Hit
TCAGAAGGGGTTTGAAATGACCCTTGAGTCCCATGCAAAAGTTTCCTGAAGC1040.1391900211461763No Hit
GAATCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1020.13651328997028828No Hit
CGAACCGGGAGATAAATAAAATTATTCAAAGAAACAAAATTTTCTTTCTTAC1010.13517492438234427No Hit
AACAGAAGGGGGCGCGGGTGCCGACGAGTTCCTGCCTCTGCTGAGCCTCGTC1000.13383655879440026No Hit
GTAGAGGGGATTCACCAGATGGAAAAACTAAAATTTTCTCCCATGACATTGT970.12982146203056827No Hit
GTTACTGGGAGGAGCACCTGAAGCAAATATTTATCCGTATTTATTGAAAATT970.12982146203056827No Hit
CAAAGCGGGATTCAAAAGTTGAACTTCTACATTGTTTGCAATAGCTAAGAAC960.12848309644262426No Hit
ACATGGGGTCATCTTCAGGAAGGAAAAGGCATCCTGGAGACAGGAGTCCATT960.12848309644262426No Hit
ATATTGGGGAAGAAGGGAGATGTGGTCATTGTGCTGACCGGATGGCGCCCTG950.12714473085468025No Hit
ATGCTGGGGAGGGTGGGGAACGCGGGAGCGGGGCCAGCTCCCAGGAAAGCTG950.12714473085468025No Hit
AATGCTGGGTCTCTTCCGGTTCTAGGCGCTTCGGGAGCCGCGGCTTATGGTG950.12714473085468025No Hit
CCTCATGGGGAGAGTCAGCTAAGTGGGGAAAGGAAAAATATGCTTTTCTCTT950.12714473085468025No Hit
CAGTAAGGGCAGCAGATGCACTTGAACGTGGGGCTCAGGAAGATCAAAGAGA940.12580636526673628No Hit
CGCGCGGGCGAGACAGCTACCAAGTGACTCACAGGTGGGTAGCATGGATAGT940.12580636526673628No Hit
ACGTTGGGGGATTCCTTTGGTATGGTGGGGAGAAGAGGCATGAGAAAGCTAC920.12312963409084826No Hit
TAGAGAGGGAGCCTCGTTACTGCATTTAGTTGCTAATGTGGATTAAGTTTGC920.12312963409084826No Hit
CTGGCTGGGTATGGAATTTTTTCCTACTGGGTAGCATTGTTGGCACACCTTG910.12179126850290427No Hit
TTGCCAGGGAAGACCACAAGGTCAATGGCATGTCTGGAATTGTACATTAAGA910.12179126850290427No Hit
AAAGCTGGGATGGTGGCTGTTTGCATTATATATCTTTTTGTATCCTTTAATT910.12179126850290427No Hit
AAATGTGGGATTCCAGCCTGTGAAATAAAGGAGACCCCATCTCTAAGAAAAA910.12179126850290427No Hit
ACAAGAGGGACATGGACCAAAAGATGTGCCATATAAAAATACAAAGCCTCTT900.12045290291496025No Hit
GCGTCTGGGAAGGACTGATTCTTATTTTCCTTCTTAGTCTTCCATTTACAAA890.11911453732701624No Hit
AAAGCTGGGAGGAAAAAGAAGGTTTGAAAACAAAACCTGTGAGCAGATTGTT890.11911453732701624No Hit
TTGAGGCGGGATCAATTAAATTATATCCTAAAATGTATATTTTGCATAAAAG880.11777617173907223No Hit
CTGATAGGGAGGAGTATGGAGCCAAGATCTAAGACCAACACTTGAGCAGGGG870.11643780615112824No Hit
AAAGAGGGGAGTGCAGTAACATGCTGTACAGGTTTGTCACATAGGAACTGTA870.11643780615112824No Hit
TTCATCGGGTATATATACACACTAAATATTTGGGACACAAAGTTAAGCAGGT870.11643780615112824No Hit
GCATAGGGGGGACTTTTTTAACTTGTTTTCATCTGTTTATCATGACTTTTTT870.11643780615112824No Hit
CTAAACGGGGCCGCGGTCGCTATGGAGGAGCCGGAGATGCAGCTCAAGGGGA870.11643780615112824No Hit
TTCATTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC870.11643780615112824No Hit
AAGGCCGGTGCACTCCCATATTCACTGCAACATTACTCACAATAGCCAAGAT870.11643780615112824No Hit
GAGCAGGGGGAGGAGGCCTACAGCAACTACTGCAAGAGGCAGGCCCAGCAGT860.11509944056318423No Hit
ACTGGCGGGCAAGCTGTGACTATTGTATATCTTTCCAAGAGTTGAAATGCTG850.11376107497524024No Hit
ATGCACGGGCAGAGAAACGGCAGGAAGACCCTTACTACTGTCCAAGGGATCG850.11376107497524024No Hit
TTTACTGGGATTAACATTGAACACTGCTGCGATTGCTCAAGGACATTTTATG850.11376107497524024No Hit
ATTCTAGGGACGACTAGCAAAACTTCTTCGGAAAAGAGCAAAGAAAAATCCA850.11376107497524024No Hit
AAAGTAGGGAGCGATTATGAAGTGGCTCCTCCTGAGTACCATCGGAAAGCTG850.11376107497524024No Hit
GAATATGGGCTGTCTTTGGTATTTAACTTTTGATAATTACATTGGTTTACTA840.11242270938729623No Hit
AGCCTGGGGGTGTATACATATGCATACACACACATTTAAATGGAGTATGTTT840.11242270938729623No Hit
GAATTAGGGGACAAGCAGACAAAATCGTTACAGATTTTTCAAGAGTTTAGGT840.11242270938729623No Hit
GTATATGGGAGTATTGGAATGATGTTTTCATTTTTGGTGGCTCTCAACTGGA840.11242270938729623No Hit
CAGCACGGGATAGCTTGCCAGGTTTACAAACTCAGACCCTTTTAAAAGTTGT840.11242270938729623No Hit
CCACAAGGGAGGACTTGTGAATGGGTTGGATGTAGTGTGGTAAGTGAGGAGT840.11242270938729623No Hit
GTTTAAGGGAGTGTTTGAAACAAGTCAGCAGAATTCCATGCCTGCCCTGATC830.11108434379935224No Hit
CACGCTGGGACAATAAAATTAGCTTTGCTTTATCAACAGATTATTTTCGGGC830.11108434379935224No Hit
TTCTGCCGGGAAGTTTGAAAAGTGTCATGGCCCTGCTGACACATTTATTTTG830.11108434379935224No Hit
AACTGAGGGGAGGCAGTGGCACAGTTCAGCAAATCTATTGAAGTCATTGAGA830.11108434379935224No Hit
GTAGTCGGGAGAGTCTGGGGGTGTTTTTCTTTCTTTTTCTTTGGTTTAGGAT820.10974597821140823No Hit
ACACTTGGGTCGAATTCTCATATATTACTATTGGGAATCTAAAATGATGTAG820.10974597821140823No Hit
AGTGCTGGGGACTGAGCCGCTGAGGGTGCGGGCTGACCCTGTAAGTGGCTGC820.10974597821140823No Hit
CGCGCTGGGATCTTATTAACATCATGATGAATAAATTAGAATAGAAATTAGA820.10974597821140823No Hit
ATAGCCGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA810.10840761262346424No Hit
CGCACTGGATATAAATTTATTATTCCTCTTTCATTTTTTTGAAACATGCCTA810.10840761262346424No Hit
GCATAGGGGATCCAGCAAGATCCTGTCCAAGAGTAGCCTGTGGAATCTGATC810.10840761262346424No Hit
CATCAAGGGCTCCTTTTCCAAGCGGCTGCCGAAGATGGCGGAGGTGCAGGTC810.10840761262346424No Hit
ATAAAAGGGAAAGAGGGAGTCATTTTATTCCAAGATGTTTTATCTTTTATGT810.10840761262346424No Hit
CTACCTGGGGTCTTCTCAATGAATAATGATTGTCAAGCCACTCTAAGTTTTT810.10840761262346424No Hit
GTTTACGGGATTGCTGGCTTTTGTGGTGAGACGGAGGAAGATCACGTCCAGA810.10840761262346424No Hit
TTCGGTTGGGATTAGGAATAAGAAAGTAGACATAGAGAACTGAAATATTATA810.10840761262346424No Hit
GCGAATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA800.10706924703552023No Hit
TTATGGGGGTAGATAACTTTCAGATTTTAGGGCATGAAATGGAAGTATTCCT800.10706924703552023No Hit
GAAACCGGGAAGCAGGTTGAGAGGCATATACAACATCAGCTGGGTGGATTTT800.10706924703552023No Hit
AATTTAGGGAATACTGTGATCATATGGATCTAAATACATAAGCACATAAGCC800.10706924703552023No Hit
AGTCTTGGGATTCAACAAGTAGACGTCTATTGAAAAGAAATTTTCCTAAGTT800.10706924703552023No Hit
CGTAGTGGGAACACATCTGATGATACAAGGAGATTCGCAAAATTCTTCTTTG800.10706924703552023No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTTGTCCC790.10573088144757622No Hit
CAACTTGGGAGCTGAAAAAAAATTTTTTTTCTTTTCAATGCTATATTTGTGA790.10573088144757622No Hit
ACGGGGGAAACAGAGGCAGGGACCACACTGTATCTACACAGTTTTAAACTGA790.10573088144757622No Hit
CTGTGAGGGACTGGTTTCTTTTCAGAGTTTCGAAGGATTAATGACTTCCTCA780.1043925158596322No Hit
ATGTTGGGGATTTTGGGAAATTAACTGAACAAATAAAAAGTTTTTGATATAA780.1043925158596322No Hit
GCGACTGGGATTTATGTAAGCAGTAAAGAACGGGGTGAAGGACATAACAGTG780.1043925158596322No Hit
CAAAACGGGGACCTGATTTAACGTTTATTACGTCCTTATACACCTTTCTAAA780.1043925158596322No Hit
ACAACAGGGATTCGGATTTGAAGGATTTAAGTGCTAAAAATCAATCCATTTC780.1043925158596322No Hit
CACATAGGGCTATTCTGATTTTTCGGTCACCCTGAAGTTTATATTCTTATCC770.10305415027168821No Hit
TTTGCCAGGGAAGCCATCCTGGGCTGCATGTGGCCCGCAGGCTGTGGGTTGG770.10305415027168821No Hit
TACACCGGGGATTATGAGGCTATGTTTGGAGATTCTCCGAATGTGGTAGAGA770.10305415027168821No Hit
ATTGATGGGATATACCATGTTACTTAGTGACATTATTCAAACATTTGTATGC770.10305415027168821No Hit
CTATTAGGGCAACAAAAAGTAATATGAATTGATGGAAACAGAGAGATAGGTA770.10305415027168821No Hit
GCTTATGGGAGCAGTATGAAGTATTCTTGCACTGCCATTTTCTTGCTGTTTT770.10305415027168821No Hit
TTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACG770.10305415027168821No Hit
CCTTCTGGGGTGCCCTAGCTGGGCAAACCCTTCTCTTCTCCCCCCAACACAA770.10305415027168821No Hit
GGGATGGGGATGGTGATCTATAATGTATCGACCATAAAAGTCAACATTATTT760.1017157846837442No Hit
GTAATAGGGTGCCACATGTAGCTACTGCAGCAAGGCTTCTGTGTACTTGCCT760.1017157846837442No Hit
AATTAGGGGGTCGTCCAGGTGTGCGAAGGAAAGAAGAAGCAGACCAACTACT750.10037741909580021No Hit
TCTTCCGGGGAGTCAGAGGCGCGGCAAGGACCAGAGCTCCGCGCGGCGAAAT750.10037741909580021No Hit
TATAAAGGGATGCCATTGCTGATCACCCAGTCTTCGGAGAAGCCTAAAATTT750.10037741909580021No Hit
ACAGCTGGGATTTGCATTACAAAGGAATTCTTAATAATTCCTGTAAGCCTAG750.10037741909580021No Hit
TAATTTGGGAATGCCATGAAACTAGAAATCAATAGCATGATGAATTTGAGAA750.10037741909580021No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)