FastQCFastQC Report
Sat 31 Dec 2022
SRR5848176.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5848176.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74995
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTTGTCCCATCTCGTATGC6370.8493899593306221No Hit
CTTATACACATCTCCGAGCCCACGAGACGTTGTCCCATCTCGTATGCCGTCT6320.8427228481898794No Hit
AAATTGGGAACAACCTTTTACATTGTGACTGTGTTTGCATTGTCTAATGACA1320.1760117341156077No Hit
TCACATGGGGGTGGTATGTAACAAGAGTTACGTATCCAGGGGCTTGTGCCTT1260.16801120074671647No Hit
GCGACTGGAAGGACAAGATGGAAAGAAAATACAGGGAAAAGTGTTCAGAGCT1260.16801120074671647No Hit
ATGCTGGGGAGGGTGGGGAACGCGGGAGCGGGGCCAGCTCCCAGGAAAGCTG1200.16001066737782518No Hit
CGTCCAGGGAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCT1190.15867724514967663No Hit
CTAAACGGGGCCGCGGTCGCTATGGAGGAGCCGGAGATGCAGCTCAAGGGGA1150.15334355623708246No Hit
CGTAGTGGGAACACATCTGATGATACAAGGAGATTCGCAAAATTCTTCTTTG1130.15067671178078537No Hit
TTGACTGGGAGTGCTATTGATTTGTGTGCGTTGATTTTGTGTCCTGAAATTT1100.14667644509633976No Hit
GCGACTGGGATTTATGTAAGCAGTAAAGAACGGGGTGAAGGACATAACAGTG1090.1453430228681912No Hit
GAGCAGGGGGAGGAGGCCTACAGCAACTACTGCAAGAGGCAGGCCCAGCAGT1060.1413427561837456No Hit
TACACCGGGGATTATGAGGCTATGTTTGGAGATTCTCCGAATGTGGTAGAGA1060.1413427561837456No Hit
TTGAGGCGGGATCAATTAAATTATATCCTAAAATGTATATTTTGCATAAAAG1050.14000933395559703No Hit
AATGCTGGGTCTCTTCCGGTTCTAGGCGCTTCGGGAGCCGCGGCTTATGGTG1050.14000933395559703No Hit
CTACTTGGGGAAGGGTGCTTTCACTAAGGTTATATTTTAAAGTAGAATAACA1040.1386759117274485No Hit
GCTTAGGGGCACACGCATAAATTCACAGATAAAATTCTTAAGCATTTCAGGA1030.13734248949929995No Hit
TTCCACGGGATTCTAGGAGTTCATAAAAGTGGGGTAACACAGTATTTGTCAT1030.13734248949929995No Hit
ATGTGGGGCACTTGAGTGTCACGAGGCAGAGCCTGGAAACATTAGCTTTGGA1030.13734248949929995No Hit
GTTACTGGGAGGAGCACCTGAAGCAAATATTTATCCGTATTTATTGAAAATT1000.1333422228148543No Hit
GAATCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA990.13200880058670578No Hit
TAGCGAGGGATACTAAACAACTGAAGATAGATAGTTTAGAAAGATAAGGACC990.13200880058670578No Hit
GTAGAGGGGATTCACCAGATGGAAAAACTAAAATTTTCTCCCATGACATTGT990.13200880058670578No Hit
TAGAGAGGGAGCCTCGTTACTGCATTTAGTTGCTAATGTGGATTAAGTTTGC990.13200880058670578No Hit
ATTTCCGGGGGCGCTTGGCCTCCCTAGTGCGGGCTGGCAGTGCGGGCAGAGC980.13067537835855725No Hit
AAAGTAGGGAGCGATTATGAAGTGGCTCCTCCTGAGTACCATCGGAAAGCTG980.13067537835855725No Hit
ACATGGGGTCATCTTCAGGAAGGAAAAGGCATCCTGGAGACAGGAGTCCATT970.1293419561304087No Hit
CCTCATGGGGAGAGTCAGCTAAGTGGGGAAAGGAAAAATATGCTTTTCTCTT970.1293419561304087No Hit
CCACAAGGGAGGACTTGTGAATGGGTTGGATGTAGTGTGGTAAGTGAGGAGT970.1293419561304087No Hit
AAAGCTGGGAGGAAAAAGAAGGTTTGAAAACAAAACCTGTGAGCAGATTGTT960.12800853390226014No Hit
GCATAGGGGGGACTTTTTTAACTTGTTTTCATCTGTTTATCATGACTTTTTT960.12800853390226014No Hit
AGCTTGGGGGAACTTAAATTAAATTGACTTATGAATGCTTTGCCTGTGGGCC940.12534168944596308No Hit
GTTTACGGGATTGCTGGCTTTTGTGGTGAGACGGAGGAAGATCACGTCCAGA940.12534168944596308No Hit
AACAGAAGGGGGCGCGGGTGCCGACGAGTTCCTGCCTCTGCTGAGCCTCGTC930.12400826721781452No Hit
CTGGCTGGGTATGGAATTTTTTCCTACTGGGTAGCATTGTTGGCACACCTTG930.12400826721781452No Hit
GCAATCGGGACAATCCAGGGACTTGGGTATACTGCAAGCTGAGATTTTATCT930.12400826721781452No Hit
TCAGAAGGGGTTTGAAATGACCCTTGAGTCCCATGCAAAAGTTTCCTGAAGC930.12400826721781452No Hit
ATAGCCGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA920.12267484498966598No Hit
AATCATGGGGGCCGGACGCCGGAAGTGGTTCTCCGCCCCTGCCACTGGGCCA920.12267484498966598No Hit
GTTCTAGGGGCTGGTTCTGGTGAATGCTGTCTATTTCAGAGGAAACTGGGAT920.12267484498966598No Hit
ACTGATGGGAGATGACTTCCTCCAGGACTATACTTTATTGATCAACATCCTT910.12134142276151744No Hit
CTGATAGGGAGGAGTATGGAGCCAAGATCTAAGACCAACACTTGAGCAGGGG900.12000800053336888No Hit
GGCCATGGGAAGTGAATTTTCTTTTCTCCAAATAGTGTGAGTTAAATCATGT900.12000800053336888No Hit
CGCTACGGGGCCTCTGCTGGGTGAACCAGTCTTCTGGTACCTCTATGCTTTT900.12000800053336888No Hit
CGCGCGGGCGAGACAGCTACCAAGTGACTCACAGGTGGGTAGCATGGATAGT890.11867457830522035No Hit
ACAAGAGGGACATGGACCAAAAGATGTGCCATATAAAAATACAAAGCCTCTT890.11867457830522035No Hit
AAGGCCGGTGCACTCCCATATTCACTGCAACATTACTCACAATAGCCAAGAT890.11867457830522035No Hit
GCGAATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA880.11734115607707181No Hit
CAGTAAGGGCAGCAGATGCACTTGAACGTGGGGCTCAGGAAGATCAAAGAGA880.11734115607707181No Hit
TTCATCGGGTATATATACACACTAAATATTTGGGACACAAAGTTAAGCAGGT880.11734115607707181No Hit
GATTCCGGGATCTGTAAATTAGATGGATGTTGGATGGAAAATGACATTGCTA880.11734115607707181No Hit
TTCATTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC880.11734115607707181No Hit
GCGTCTGGGAAGGACTGATTCTTATTTTCCTTCTTAGTCTTCCATTTACAAA870.11600773384892325No Hit
AATTAGGGGGTCGTCCAGGTGTGCGAAGGAAAGAAGAAGCAGACCAACTACT870.11600773384892325No Hit
AAACTTGGGATTGACAGTGTTCTGGATTTTAGCCATTCTAATAGGTATGCAG870.11600773384892325No Hit
ATGCACGGGCAGAGAAACGGCAGGAAGACCCTTACTACTGTCCAAGGGATCG860.11467431162077472No Hit
AATAGAGGGCATGGTGGCGTAAGTTCTGAAAAATTATATGACCGTGACAATA860.11467431162077472No Hit
CAAAGCGGGATTCAAAAGTTGAACTTCTACATTGTTTGCAATAGCTAAGAAC860.11467431162077472No Hit
AGTCCAGGGGCCTTTTCATATCCTCAGAAACAGGAGCCACCAGAAATGGAAC850.11334088939262618No Hit
AAAGAGGGGAGTGCAGTAACATGCTGTACAGGTTTGTCACATAGGAACTGTA850.11334088939262618No Hit
CCGCCGGGGGTACTCAAGATGGCGGCTCCGGGCGGGCGTGGCCAGTGACTAG850.11334088939262618No Hit
GACCATGGGAAACCATCAGTCTCCTGAGACTCACTCATTGTCTCAAGAACAT850.11334088939262618No Hit
ACGTTGGGGGATTCCTTTGGTATGGTGGGGAGAAGAGGCATGAGAAAGCTAC850.11334088939262618No Hit
AGCACTGGGATTTTCTTAGAAACCTAGCCTGAGACCTCTTGGAGCCCTCTGG840.11200746716447763No Hit
AACGCAGGGGAGACGTTCTTCGCCGAGAGTCGTCGGGGTTTCCTGCTTCAAC840.11200746716447763No Hit
TCCCGGGGTCACAAGGATATCTGGCAAAGGAAACCAAGCTGCTTCTTGACAT830.11067404493632908No Hit
AAGGTTGGGAAATTCTCTGGATGAGCAAGAAGGGGTTAAAAGTGGAATGTAT830.11067404493632908No Hit
CAGCAAGGGGCGGACGGGAACCAACCCCACAAAAGTGCAAATAATCCTCAGA820.10934062270818055No Hit
ACACTTGGGTCGAATTCTCATATATTACTATTGGGAATCTAAAATGATGTAG820.10934062270818055No Hit
CGAACCGGGAGATAAATAAAATTATTCAAAGAAACAAAATTTTCTTTCTTAC820.10934062270818055No Hit
TATCACGGGAAGAGGGACGATATTTATGAATCAGGGTTAGGCTCCATATTTA820.10934062270818055No Hit
AGCAGAGGGAGCACACCTACACAGCCAAGATCTGTAGCAACACATGAGGCAC810.108007200480032No Hit
ATGTTGGGGATTTTGGGAAATTAACTGAACAAATAAAAAGTTTTTGATATAA810.108007200480032No Hit
ACACCTGGGTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAA810.108007200480032No Hit
TTATGGGGGTAGATAACTTTCAGATTTTAGGGCATGAAATGGAAGTATTCCT810.108007200480032No Hit
TTGCCAGGGAAGACCACAAGGTCAATGGCATGTCTGGAATTGTACATTAAGA810.108007200480032No Hit
ATTGACGGGGTAGTATGAGGATTGAAAGACCAAGATCCCTATAATCATCCTG810.108007200480032No Hit
CAGCACGGGATAGCTTGCCAGGTTTACAAACTCAGACCCTTTTAAAAGTTGT810.108007200480032No Hit
GAATATGGGCTGTCTTTGGTATTTAACTTTTGATAATTACATTGGTTTACTA800.10667377825188346No Hit
ATTGATGGGATATACCATGTTACTTAGTGACATTATTCAAACATTTGTATGC800.10667377825188346No Hit
AGGTGCGGGAAGCACCACGCTCTCATCCTGCAAGTCGGCGCACACAGTGGAT800.10667377825188346No Hit
CAACCAGGGAATGTGCTCGGCCTTCATTAGCATCCTCTGCATGGGGTGGTTT790.10534035602373493No Hit
ACGTCCGGGATTCATTATCTGCAAATTAAGACTCACCTTCACTTTCCAAAAT790.10534035602373493No Hit
GCACCTGGGTCTGCGGGGGAAGTTTTAAATTGTACACCATAAACAGTCTTCT790.10534035602373493No Hit
GTAAGTGGGATAAGCACTTATATTCAAATAGAAAAACTGTCTTTGGACCTCT790.10534035602373493No Hit
TTCAAAGGGAATGAAATGAGATGAAATAAAATAATGAAATGATGAAATAATG790.10534035602373493No Hit
GAAACCGGGAAGCAGGTTGAGAGGCATATACAACATCAGCTGGGTGGATTTT790.10534035602373493No Hit
CGATTAGGGGTTAATTGAATAATCTCTATTTAATTCCACCCTTTTGAGGTTT790.10534035602373493No Hit
TACAAAGGGACTGACTAACTTTGGTGTTTTGTTTCCAAGTTAAGTGATTCCT790.10534035602373493No Hit
AATTGTGGGAGTCGGGGGGTAATCTGATCTAAATTGTATTGACAATACCATT780.10400693379558636No Hit
GCCATTGGGGTTCTGATGGCTTTTCTTGTGGGTTCTATCTCCTTTTCCCTTC780.10400693379558636No Hit
CATTAAGGGTGGCTGGGGGTCTTCCGATCTGGCCATGGGATGTCAGATGTTA780.10400693379558636No Hit
GGCGATGGGATTTTTGAGCATTTGTCTATATTTGGTGAGAGAGAATAGATAC780.10400693379558636No Hit
AGTTTAGGGATTTCTACTCTTACTAAATCACTAGGGTGCTCAAAACTCAGTT780.10400693379558636No Hit
CACATAGGGCTATTCTGATTTTTCGGTCACCCTGAAGTTTATATTCTTATCC770.10267351156743783No Hit
TTGCATGGGAGGAAGATATGCTAGGAAACAGATTATTACTTCCAACACCAAC770.10267351156743783No Hit
TTTAATGGGAGATGAAAAACTACAAATCAATTTACTTGCCAGCATTCCAGCA770.10267351156743783No Hit
AAAACAGGGGCAAAATCGTTTATATATGTTTAAGAGAAATGTTGTTTGATTC770.10267351156743783No Hit
GTTTAAGGGAGTGTTTGAAACAAGTCAGCAGAATTCCATGCCTGCCCTGATC770.10267351156743783No Hit
GTATATGGGAGTATTGGAATGATGTTTTCATTTTTGGTGGCTCTCAACTGGA770.10267351156743783No Hit
CAAATTGGGAGGATCATTCCAGATTGAAATGATATGAGAAAGTCACAGGTAT770.10267351156743783No Hit
ATCAAGGGGATACATGCGTATTTTAGGGTATAAGGCTAAATTCAAATCTGTG770.10267351156743783No Hit
CGTAAGGGGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA770.10267351156743783No Hit
AGTGCTGGGGACTGAGCCGCTGAGGGTGCGGGCTGACCCTGTAAGTGGCTGC770.10267351156743783No Hit
ATCTTTGGGTGACGATGAAGAAGCCTTGGATGAAGAAACAAAGAGGAGAGAT770.10267351156743783No Hit
CCGTTGGGTGGCTTGGGACTGTCTAATGAGATTGGAGCTATTGAAAAGGCTG760.10134008933928929No Hit
CTACCTGGGGTCTTCTCAATGAATAATGATTGTCAAGCCACTCTAAGTTTTT760.10134008933928929No Hit
CCTTCTGGGGTGCCCTAGCTGGGCAAACCCTTCTCTTCTCCCCCCAACACAA760.10134008933928929No Hit
AATTTAGGGAATACTGTGATCATATGGATCTAAATACATAAGCACATAAGCC760.10134008933928929No Hit
AATCCTGGGAGGAAAAAAGGAAGATTGAACTAATAAAATTTTATTTCTTAAA760.10134008933928929No Hit
GTAGTCGGGAGAGTCTGGGGGTGTTTTTCTTTCTTTTTCTTTGGTTTAGGAT750.10000666711114076No Hit
GGCTCAGGGATTGCAATAAAGTATAATGTTTATTAAATGCTTCATTTGTATG750.10000666711114076No Hit
ATAAAAGGGAAAGAGGGAGTCATTTTATTCCAAGATGTTTTATCTTTTATGT750.10000666711114076No Hit
TTCGTCGGGGCAAATTTTCTCATTAATTTGAAGGAATCGTTAATAGAATCAG750.10000666711114076No Hit
CTCTTGGGGAGAGCAGCATGGGATACTCAGCTACCTCCCAGCAGCCTCCACA750.10000666711114076No Hit
CACGCTGGGACAATAAAATTAGCTTTGCTTTATCAACAGATTATTTTCGGGC750.10000666711114076No Hit
ACGGGGGAAACAGAGGCAGGGACCACACTGTATCTACACAGTTTTAAACTGA750.10000666711114076No Hit
TAGCGTGGGATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGCC750.10000666711114076No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)