FastQCFastQC Report
Sat 31 Dec 2022
SRR5848150.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5848150.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91609
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTTGTCCCATCTCGTATGC4470.48794332434586124No Hit
CTTATACACATCTCCGAGCCCACGAGACGTTGTCCCATCTCGTATGCCGTCT3690.40279885164121426No Hit
ATTCCCGGGTCTGACAGAGGGCTTTGAAAAAGAGGAAGGACACTTCTTTTAT1600.17465532862491676No Hit
GCAGCGGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATC1590.17356373282101104No Hit
GCCCTAGGGGTGGCAGGGTCCTATGCATATTCTTATTTTTTCTGTTGGATTG1590.17356373282101104No Hit
CAACAGGGGCACCAAGAAGAATTTACCCAAAGAAGACTACCTCGAGATATCT1530.16701415799757666No Hit
CAGAGTGGGGGCAGCGCGGCGCGCTGTCCCCGGTGCTGATGCTCAGCGCTGC1510.16483096638976522No Hit
GATCTTGGGGATGCGGGGGGCAGTGAGTTACCAGCTGGAGCGCTGTATCGTA1490.16264777478195372No Hit
AAACTAGGGAAGTAAAAAGTTCATGTTCCTCACTATATCAGTTAGGAGTTAT1430.15609819995851937No Hit
TCAACCGGGCTGCCATGACTTCTTCTTTAGAAGGTTTCTCATTAAAAACATC1390.15173181674289646No Hit
CATCATGGGAAACTGTAAATATTAAGAAATCCACATTGTCATTTCTTCTGTG1360.14845702933117927No Hit
AGACAAGGGATTATGAATCACAATATCACAGTCACATATTTTAGCCTTCTGA1350.14736543352727352No Hit
GAGCCAGGGCATTATTATAATCTAATACAAATTTTACTTTTTATTGTTTCCC1340.1462738377233678No Hit
ACCTATGGGCTTCCGATCTGTATCTGGGAGGTGGAGATCACCTTATTCCTTT1320.14409064611555633No Hit
CACTACGGGAAGGAATTCAGCTTCGTGCAGCTCTCAGATGCCTACAGCACGG1320.14409064611555633No Hit
CACCACAGGGAATGCTTCAAAGATAAGAAACTTCATCCTAATGATTTCTAAA1320.14409064611555633No Hit
GCCTATGGGGGGTATATTTGCTGCCAAGCCACTTGCCAAAGAAGAGGAACCA1320.14409064611555633No Hit
CAGCATGGGACTTGATATTGTGCACATGCAGGCTGCGGCAGAGGGGAGTAGC1310.1429990503116506No Hit
CTTGCCGGGGACAAACACTTATATGATTCTCCTCTTTCCTGTTTACTGCAAA1290.14081585870383914No Hit
TCGGCTGGGATAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGG1280.13972426289993342No Hit
ACGACTGGGAGCTTGTCTTGGCTTTTGACGTGTCCTCCTCACTAAGCTTAAT1270.1386326670960277No Hit
GCAAACGGGAAATAAAGATGGGACCCCGAGAGAAGGGACTAGGACTAAACGG1260.13754107129212195No Hit
AGCTAAGGGGCCATTCAAATGCCTCCTAACTTTTATAGTTATTTTGTTTTAT1250.1364494754882162No Hit
TGCTTAGGGGCTTTCTCCGCTGGCAACGGCGCCGCTCCCCGCTCCTCCTCCC1250.1364494754882162No Hit
TAATGCGGGCGTGCCACTGCACTCCAGTCTGGGTGACAGAGTGAGACTCCGC1240.1353578796843105No Hit
AAATTTGGGGGGAGGAATGAAAAGAAACATGGCAAATGAGGAACAGAAAATA1240.1353578796843105No Hit
TCACCAGGGGCTCCTCCCGCCGCCCAAGATGCCGAAAGGAAAGAAGGCCAAG1240.1353578796843105No Hit
TGCTCTAGGGCAGAAAGAAGTGAGAAAGGCTTCTACTACTTCTTAAAATCTC1220.13317468807649904No Hit
AGTTTGGGGCGAGTTAGAAAAACGCAAGTTGTCTGGACTTGATGGTTTGATT1200.13099149646868757No Hit
GCTGAAGGGACCCTCCCCCGCCACTGAAGGAAAGGGAGGCAAAGTGGGAATG1190.12989990066478185No Hit
TATAGTGGGATGTAACAAAGTCACTATTCATCAGAGTTTCATAGAATTATTA1190.12989990066478185No Hit
TAGTCCGGGGCAAGGCTGGTTCAACATACACAAATCAATAAACGTAATCCAT1180.1288083048608761No Hit
TAACAAGGGACTCTGGCTTGCAGTAAGATAATTTCCAGTTTCCTCTGACGTT1180.1288083048608761No Hit
AGGAACGGGAAATGCAATATATGAACATTTACTATAAAAACATCTTTTAAAG1180.1288083048608761No Hit
CTCTTTGGGATTTCTATGTAAATATGTACACAAAAATTGTTCCTCCAAAGAC1170.12771670905697038No Hit
AGCAGGGGGACTTAATACATTTTTTTTCAAGCGAAAGTGTCAGCAAAAAAAT1170.12771670905697038No Hit
CTTAATCAGGGGATGTCCAAAAACTGCTGTCATGGACTATTGATTGTATTGA1170.12771670905697038No Hit
GATTATGGGGTGGAAGGACTCATGACCACAGTCCATGCCATCACTGCCACCC1170.12771670905697038No Hit
TCTCGCGGGATACATATTATGAGAAATATTGACTAGCAAAAAGAAGAACGAG1160.12662511325306466No Hit
CGTTGCGGGAGAAATACCATATGAAGGAGATGAAATAAGCATGATGCTGGTG1150.12553351744915892No Hit
TAATTTGGGTCCTAGGGCAACCTGGGGCAGACAGGCCTGGTGGGGGGTGGGG1150.12553351744915892No Hit
TCAGATGGGAGAAACTGGCCATGGTATAATGGAAGAACCAGAACTTACTTTA1130.12335032584134746No Hit
ATGCAAGGAAGGAAAGATTGTATATTATAAAAACAAATATTGTTATGCCATT1120.12225873003744174No Hit
TGAACTGGGAGTCATCTTGATGACAAGTGAATGCAAGGCAGCTGGTACCTTT1120.12225873003744174No Hit
CTTGCTGGGAGGAACTTAGTAGATATTAGATTTAATACATACTAATTAATTG1120.12225873003744174No Hit
AGGCGGGAGCCCAGCTCAGTATCATCCCATCTCCCTCAGGATATCTGAGAAG1110.121167134233536No Hit
TAGATCGGGAGCTCGCTGCAACCTTCACCTCCTGGGTTCAAGCAATTCTCCT1110.121167134233536No Hit
ACGCTGGGGGATCTTGAAGTCGGGACTATCATAAATGAATATCCTACCAGTC1110.121167134233536No Hit
AGTCCGGGGAGCAGACACTTTTAAATGCTGTTTTCTCATTTAATACAGCAAA1110.121167134233536No Hit
GAGCACGGGGGCGCGGCCCTTCGGGCGCCCGAGCCCGCAATGTCGGGCCCCA1110.121167134233536No Hit
TTTATAGGGTGGTGGAGTGAGAGCCTTTGCCTTTAGGGGTGTGTATTCACAT1100.12007553842963029No Hit
TTTTGTGGGGGAAGTTATGCTTATACAAGAGCAGAAGTTGTTTATGAATGGA1100.12007553842963029No Hit
TAAAATGGGAAGTGGGGTCTTGCTTGGGTGTCCTCACAATTTTATAACAAAT1090.11898394262572455No Hit
GTTGCAGGGAATCTATAAGCTGGAAGAACAGCTGCATAATGAAATGCAGTTA1090.11898394262572455No Hit
CATGTCGGGCGGTAGTGTCTAGGAGTGGGTGCCTGCAACCCTAGTGTTATGA1090.11898394262572455No Hit
GGAATTTTTGCCATGTTGGAATAAATATCCAATATTAAATCTTTTAATTTCC1080.1178923468218188No Hit
CGGGCGGGGAGACAAGATTTTCAGCAAGATGGATAAGAACAAAGATGACCAG1070.1168007510179131No Hit
CTCAAAGGGGTGCTAAGAAGAAATATTTGGAAAAAAAGATATTTGCATAATT1070.1168007510179131No Hit
ATAATGGGATACTTAGAGCTAAAAAATTTACAGAGGCTATGTAGTTCAGCTT1070.1168007510179131No Hit
TCCCCTGGGAGTGGACATGGTGAGATGGTCAAACTACTCTTGTCTAGAGGTG1070.1168007510179131No Hit
GTTACTGGGAAGGTATGTAACTTGAATAGGAAAAATGTCCATCAAATGCACC1070.1168007510179131No Hit
TGCGTTGGGTTGACTTTTGAATGCGGCAGTCAAGGGTTTAAGTGGGAAGCCC1070.1168007510179131No Hit
TCTAAGGGGATTGGGGGATTGAACTCCATCCATGCTTTTCTCCTTTAAGATA1060.11570915521400735No Hit
GACAGAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1060.11570915521400735No Hit
AATCCAGGGGTATTAATGCAGTATACTGGGTAGACTTTTTCTTTCTGTATGG1060.11570915521400735No Hit
CCAATAGGGGAACCTCAGAAACCAGTTTCAGCATATGCTTTATTCTTTCGTG1050.11461755941010164No Hit
GGCTCTGGGGGGACGGGGCGCTCGCCCCACAGGCGCCAGGCGCTCCGGCCGC1050.11461755941010164No Hit
AACCTTGGGAAGGGAGACTTCCTTTTTGTAGAATAGTCCTGAAAATACTGAC1050.11461755941010164No Hit
GCAACTGGCCAGAAAGAGGCAATTATTTCCTCTCAGCAGCCTGGCCCCAGGA1050.11461755941010164No Hit
TTTGCAGGGGAACTTGGATAGGTGATTAAATAGGGGGTGAGATCCCAGTTCC1050.11461755941010164No Hit
TTGTTTGGGATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAAC1050.11461755941010164No Hit
GGTCACGGGATGTGGGGCATTTCCCTGGCCCAGCTCCTGGTGGACCCCAAGC1040.11352596360619589No Hit
TTTTACCGGGGAAGGAGGGAAAGAAGGAAGGAGGGAAAGAAGGAAGGAGGGA1040.11352596360619589No Hit
GAACCGGGGTTCATAACTATTCAGAATAGTAATATATATTCTCTACAATTTG1040.11352596360619589No Hit
CTACAAGGGAGGGTCCACGTGGCCTATATCTGCCTGTCCAGCAGCAACCAGC1030.11243436780229016No Hit
GTATGGGGGATTTTTAAAAAGAAATGATAGTTCTTTATGTATAGAATGTGGG1030.11243436780229016No Hit
GCCAAGAGGATGTTTTGTTATGTATATGTGTCATTCTTCCCTTTTCTCTAAC1030.11243436780229016No Hit
TAAAAAGGGCTTCGGTCTGAATTTTAGACGATCACAGAAACGGTCTTTATGA1030.11243436780229016No Hit
TCATCAGGGATTCTTATTTTTACTTTAAAAGTCAGCACCTGAATGAAACCCA1030.11243436780229016No Hit
TTCCTTGGGACAGACTGGGTGGCTTCACTATGGAAATTTACTTTCTCACAGT1030.11243436780229016No Hit
TGAACAGGGCTATAATCAATGTCAACAATAACTGTGCTACTGGTTCTACTGC1030.11243436780229016No Hit
CGGTGTGGGAAGAGGAGAAAGGCGTTGTCACCAATGGCCTAGACTTGAGCCC1030.11243436780229016No Hit
GACTTGGGGAATGTTATTTACATCCCTGTGCTTCCATGTCCTCATATGAAAA1030.11243436780229016No Hit
TGACTAGGGAAGGTATTTTATAGTTTTAATGCAGTATTTTAAAGGTCATCTT1030.11243436780229016No Hit
TCAACCGGGTCTTAAGAGGAATAGCTTTTTTACTCAAGCAACCTTTGTTTAG1020.11134277199838444No Hit
CTATGAAAGGGTGGAAAAGACAGACTTTTAAATTCTCAGGCGATGTATCTAC1020.11134277199838444No Hit
CAGTCCGGGGACGGCAACCCCTGCAGCTCCTCTGCCTTTGTGCTCTGTTCCT1020.11134277199838444No Hit
TTGTTAGGGACCCTCTAACAGATTTTTAAGTGTATAATACAGTATTGCTGTC1010.1102511761944787No Hit
GCTGCTGGGGGAAACATAAAGGTATTTTTCTCCAGTCTTCACAGTGAGAATC1010.1102511761944787No Hit
TTGTTAGGGTTTATGATGAGGAAAATGAGGACTACAGACTGATTAGGGATAA1010.1102511761944787No Hit
TGCCAAGGGAAAACAGGAAAATACATATTTCTAGATGGACATAAAACATATG1010.1102511761944787No Hit
AGATCTGGGGAGATCGCTGATGGCTTGCAGTTGGCACGTGAAGGAAAGTGAG1010.1102511761944787No Hit
CTGAGAGGGATACAAATTTATGTGTGTTTGCCAATGAGTGTGTGGTCACGTA1000.10915958039057298No Hit
TAGCCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1000.10915958039057298No Hit
TACTGCGGGATCCTTGAGAGCTTTTAAGAAACCTTTAAAATTTAGTTGCTAT1000.10915958039057298No Hit
CTAAGCGGGTCGACCAGCTGGAGGCAGAGAAGGCAGAACTAAAGCAGCGTCT1000.10915958039057298No Hit
GTTGCCGGGGGATTATGAGTATGCTGACTTTTCACGATTGGCTGGTGCATGT1000.10915958039057298No Hit
TATTCTGGGCAGCTTTCAGAATAAAAACAATGATAAAAAAGACCAAGCACTA1000.10915958039057298No Hit
TAACATGGGAAGCTTGATTATAGTATTGTCACATTTTACCACAATACTAGAC1000.10915958039057298No Hit
CGCAATGGGCTATCTGTGCCATTTCCATGAGAAAAACATGTCTCTGCTAGCT1000.10915958039057298No Hit
GCCGCTGGGCTCATCTAGGAAAAAAGGGCAGAAGTTAAGGTTTTCCTTAATT990.10806798458666725No Hit
GTGGCAGGGATTTAAAGATGCTACTAATGAACAAAATAATGCCTATAGTTAA990.10806798458666725No Hit
TACTCGGGGTTATGAATATAGATGCAAACATTCTAAACAAAATACTAGCAAA990.10806798458666725No Hit
GTACTAGGGCTACATTATCTTCTTTTTACTATTCTAGAAGATTCACTTTATA990.10806798458666725No Hit
GAGCAAGGGCTGGAATTTCTGATCATGAGTCTGGGTTAGGACTCATCTCTGT990.10806798458666725No Hit
AGACAGGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC990.10806798458666725No Hit
TATTGTGGGATGAAGAAAACAATACAAAAATCAATGAACCAAAAAGTGAGTT980.10697638878276153No Hit
GTACTTGGGACAATGTTTTGAAAAACATTTTCATGTGGCAAAATGAAACAGG980.10697638878276153No Hit
CGACAAGGGGAGTTCCGTCGCAGCCGGGATTTGGGTCGCGGTTCTTGTTTGT980.10697638878276153No Hit
ACACCCCAGTGTATAAACCCTACCTTGTATATTGGTTGTGAAGATTAAATGG970.1058847929788558No Hit
GTCTATGGGATAAAACATATGTATATATATTAGATAAACAGCAAACTTTGTT970.1058847929788558No Hit
GCAAGTGGGATAGGACAAAAAAATTTAACCAATTTTATTGAAACGAATTTCA970.1058847929788558No Hit
ACTTTAGGGAATCCAACACTTTTTGGACATTATGAATCCAGCAATGGGGTGA970.1058847929788558No Hit
AACCAAGGGGTGTTCTTGTTCTGATGTTGTTTCCTGAAATGATTTTTCTTCC960.10479319717495006No Hit
GTGTGCGGGAGGAATCTCCATTTTTTAAACCATGTACAGGCAGTCTGTTTTC960.10479319717495006No Hit
ATGCAAGGGAAACACTCATCACATTTTTGTCATTGAATTATTTGCAATCAAG960.10479319717495006No Hit
TAAAGCGGGATCCTAAAAATCCTGGAGAGCTGTATTTAATGCATTTTTGCAC960.10479319717495006No Hit
AGACTGGGGGAATACTAGGATATTTGTTTGGCAGCAATAGAGCGGCAACACC960.10479319717495006No Hit
GTCAGTGGGCATGGATGAAACTATAACTTAAAGAATAATACTTAGAAGGGTT960.10479319717495006No Hit
CATACTGGGCATCCTCACAACTTGTGAGATGTGTATTCTGCATTTTTCAGAT960.10479319717495006No Hit
TAGCTAGGGCCTCCAGTCTACTGAAAATTGGCCAGGAGACAGATAAAACTAC950.10370160137104434No Hit
AATACTGGGAAGGGAGTGGTTTTACAGGGGAGAAACCCGACAAACACTACCT950.10370160137104434No Hit
CATACAGGGGGGGAAATTGAGGGAGACTTGGAAACCGCGCCAGGCCCAACGG950.10370160137104434No Hit
GCGCAGGGAACTGCACCTTGGTTGTTGATGTCAAGTAAAAAAAAGATTGTTT950.10370160137104434No Hit
AATAGAGGGAGGTTGGTCTCTTGCCAAACCGTGGCTGTTGTGTGTTGTTCTT950.10370160137104434No Hit
CAGCCTGGGGTGATACATGAATATGTATAAACATAAACTAGATGAACTCCTT950.10370160137104434No Hit
AGACTTGGGCTATTATAAAATGTTAAAATTTAACGAAACTCACACAGACCAT950.10370160137104434No Hit
TTTACTGGGACATATGCAAAGACATAGAAAATGATTTCTTTTCATCCAAGTG940.10261000556713859No Hit
CTGCTTCAGGGATAGCAGCTAATGCTTACCAGCCACTCATAACATTCTAAAA940.10261000556713859No Hit
ATATGGGGGGTCTGGCACTTACTGGCACTGAATAAGCAGTTTTTTTAATGAT940.10261000556713859No Hit
AGCATTGGGGGCAGCTGCGGGTGCGGCGGGCGCGGGAGCGGTGGGAGCTGTG940.10261000556713859No Hit
CCAAAAGGGATTTAAGAAATTGTTCTGATTATTTACGTCAACTCATTAGAAT940.10261000556713859No Hit
ACTCAAGGGACAGTTTCATCAGGTTTTTAATTTTAAACATCATGTCCCATAT930.10151840976323288No Hit
TTATGAGGGACTTCCTTCCTGTGATTGGGTTGGTGGATGCTGAAAAGCTAAA930.10151840976323288No Hit
CTCGTGGGATGGGATTGTTGTCCCAACCCTGTACTGTACTCCCAGTGGCCAA930.10151840976323288No Hit
TTGCCTAGGGGAAAGTTAGATTAATATCAAAATAAGAATAGCAGCACTATGA930.10151840976323288No Hit
TTTCAAGGGCTCAAGATGTTAACTATAAACACACTGCATACAATTTTCTTCT930.10151840976323288No Hit
GAGCAAGGGACTATCAGTTGGAAGGAGTAGCTATCTCTGCCAGAGTTTAAAA930.10151840976323288No Hit
TTGCCTGGGTTTATCCAAATACCCAAATACTTTTGAAGGTGTTAATACACTA920.10042681395932714No Hit
CATGGTGGGACTTCCTATTATGTGTGCATAATATTCTCACACATTGCCTGAC920.10042681395932714No Hit
GGGATTGGGATGGAGAAGAAAAATGTCTTTTGTAATGCACTAGGCATGAGTA920.10042681395932714No Hit
TGAATAGGGGAGATGTAGTACTTTATAAGATGAACCAAGTATGATCCTCCCA920.10042681395932714No Hit
GTTCATGGGAGGGACGCGCGTCTGCCCAGGCGGGTCTTTGCGGGGCCACTAG920.10042681395932714No Hit
TATGAAGGGAGTCAAGAAGAAGCAACTTGAAGGCTGGGCGTGGTGGTTCATG920.10042681395932714No Hit
TAGGTGTGGGATAGGACCAAAAGAAACATAAAAGATATATCAATCAACCACA920.10042681395932714No Hit
TGATGCTGGGATCATAAAAGGTTTATTAGACTAGACTTTAAAATGATGAATT920.10042681395932714No Hit
TAACAGGGGGTAGAACAAGCATCGGTTGAAGTACCTGATGGACCAACACTCC920.10042681395932714No Hit
CTGCGCGCGGAACGTGGGCAAGACCTGCCTGACCTTCCGCTTCTGCGGGGGT920.10042681395932714No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)