FastQCFastQC Report
Sat 31 Dec 2022
SRR5847987.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847987.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87654
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACATTGCGTCATCTCGTATGCCGTCT10981.2526524745020193No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACATTGCGTCATCTCGTATGC9551.0895110320122299No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACATTGCGTC1630.1859584274533963No Hit
ACAACAGGGTATTGTATTTGTAACAGTATGTGTTTAAAAATAAGTATAAATA1520.17340908572341251No Hit
GAACTGGGCTAATGCTTACCGAACGAAAAATTCTAGGCTATATACAACTACG1420.16200059324160906No Hit
AACTTGGGGAGAGAAGCGGGGCGAACTGAGGCGAGTGAAGTGGACTCTGAGG1330.15173295000798595No Hit
GTTAGCGGGGAGGGGCACCAACTCTTCCTGTGCAACGTGGAGCGTAGTGTGA1280.1460287037670842No Hit
TGTACTCGGGGCACGAGAACGAAGTTCTTCGTCACCAGCTCTTTGCTGCCCC1270.14488785451890387No Hit
CCCTCCACTGATATTCTAGCATTTATGGGTTTACTTTTGTTTACCTTTTGGA1270.14488785451890387No Hit
TAACGTGGGCTTCCGATCTTGTCTAGGGACAGCGCGCGGGGCGAGCCAGCGA1260.1437470052707235No Hit
CATCGGGGTTAACTCTAGCCCTGACCTCTATTGATCTTTTGGGAATGAGGGC1260.1437470052707235No Hit
TATGCCGGGGCTATGGGCCGCAACAAGAAGAAGAAGCGAGATGGTGACGACC1250.14260615602254317No Hit
TGAACGGGACCATCCCCTGTTCTTTGACTGATGAAATCGGCATATGATAAGG1240.14146530677436284No Hit
GCCAACGGGGGACCAATCTATCACCCTATAGAAGAACTAATGTTAGTATAAG1240.14146530677436284No Hit
GTCTCTGGGGGGGGCCGGATAATGGCGGGCGCTGCAGAAGATGCGCGAGCTC1230.14032445752618247No Hit
TTGCGAGGGTAATAGAGAAATAGAAAAAAGAATAGAAAATTCAGCCCCACAT1230.14032445752618247No Hit
ATTTCTGGGGAGACGAAATAACATGAGCCACTATAATTATTGGCTCAGTTCC1220.13918360827800214No Hit
TGCGTGGGGGACCCTTTCCTTTTACACATGAGGAATGTAAGCCCAAAGAAGG1220.13918360827800214No Hit
TAAGCTGGGAGAACATATATATAAATGAACAGATGGGTGCTTTTTTTTTTTT1210.1380427590298218No Hit
ATGCTCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1210.1380427590298218No Hit
AAGCCTGGGATTCTTTAAAAATCTTGCAATGTGCAAAATTATGCAGTGAAAA1200.13690190978164143No Hit
TTTTGAGGGTCTCTGGCATGGAATTGTTAATTTTCTGACACGTCTAGATGTG1180.13462021128528076No Hit
TTAGCCAGGGACTGACAATTAACAGCCCAATATCTACAATCAACCAACAAGT1180.13462021128528076No Hit
GCCGAAGGGTGCTGCTTTTTGTGAGCTCCTTTTACAAAGAATACCTTTCTGT1180.13462021128528076No Hit
TAAGAACGGGGGAGGCTCTGGCTGTGGATGGAGCTGGGAAGCCTGGGGCTGA1170.13347936203710042No Hit
AGTAGTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1170.13347936203710042No Hit
CGTTATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1170.13347936203710042No Hit
GCAAAAGGGATCCTGGTGGCTAGCCAGTGCGGGGAGGCCCTGCCCTGGGATA1160.1323385127889201No Hit
GGATGGGGGGATTAACAAGTTAGAGGTTAAAAAAAGAAAATAAAAGATACTC1160.1323385127889201No Hit
CACGCGGGGATAGATCACAGGCTTTTGCAATAAGAAAACAATCACTTGGGAT1160.1323385127889201No Hit
GTTTGAGGTCCGGAAAAAAAGAACCATTTGGATACATAGGTATGGTCTGAGC1160.1323385127889201No Hit
TACATAGGGACGCATCTTCCGTACTGCTTGTATTAGGATGCAAGATTGAATG1140.1300568142925594No Hit
CAATGGGGGGCCTTAGAGATCGCCTGAAGAGCGGAAGCCTTCTGTCGAGAAG1130.12891596504437905No Hit
ACTCCAGGGATTATTAAATCTCTCAGTGTTAGAAGAGGCAATCTGGCATAAA1130.12891596504437905No Hit
GTGGTAGGGTAGTCCTGGAAATAGACATACCCAAATTATACAGAGCAGGAAC1130.12891596504437905No Hit
TCGCTTGGGAGCTGAGTCTGGAACATATGAAGTGAGGTTTACTTCTAAGAAC1120.12777511579619868No Hit
CTCCCCTGGGGGAATATAAAATTGCCAAATATCCTTTCTCATGGAAGCGCGT1110.12663426654801835No Hit
AAATTGGGGGACTGTGTAATAACCACTATTGGGAAACATCCCGTAAACCTGC1110.12663426654801835No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACATTGCGTCA1110.12663426654801835No Hit
ACTTAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1110.12663426654801835No Hit
GGCTCCGGGCAATGGATTCATGGAGTAGCCTGGACTGTTTCATAGTTTTCTA1110.12663426654801835No Hit
ATAAGAGGGTTAGTCTACTGACTGCAAATGAACACTGGACTCCATGCATATT1110.12663426654801835No Hit
CTTATACACATCTCCGAGCCCACGAGACATTGCGTCATCCTGTCTCTTATAC1100.125493417299838No Hit
CAGCCTGGGTGACAGAGCGAGACTCTGTCTTAAAACAAAACAAAAAAGATTA1090.12435256805165766No Hit
TGCTCTGGGGCTGGCCAAGGGGTTTTGGTGCATGTCCAGTTAGGCTTTTCTC1090.12435256805165766No Hit
GTTTATGGGACTTCAGCAACTCCTCTGAAAGATAACACACAACAGTTTAGAG1090.12435256805165766No Hit
CTATGCGGGTGAACAATTAGAAGTACACTTGAAAACATATCAATAAATATGT1080.12321171880347731No Hit
CCCAGATGCAGGATGTTTTCAACCAGTAAATTTTATTGCTGTTGGTGCCAGA1080.12321171880347731No Hit
CACATAGGGGAGCCGCAGGAGGCACAGGCCTGTCCTGGGTCCCCGCAGGTCT1070.12207086955529696No Hit
CAACGTGGGCTGACAAAAATCAAGATGATGCTGACAGAGCACAAAAGGCTTT1070.12207086955529696No Hit
CGTCCAGGGATGGGTTTGGTTTTGTGATGTTTTTCCCTAATGGGAAAAACGT1070.12207086955529696No Hit
TTTACTGGGAGTTAGCAATAATTTATTGTATATTTCAAAATAGCTAGAAGAG1060.12093002030711662No Hit
AATCTAGGGTCCGATCTTTTGCAGGGAGGTGTTGGCATTCTTCGCTGATTTG1060.12093002030711662No Hit
GTGCCCTGGTCGGGAGTCATATGCCTTAAAAATGACTGCGAGTCAGTGTGAA1060.12093002030711662No Hit
GAGACAGGTGGAAACCAAGGTTCGAGCTAAAATCCGTAAGATGAAGGTGACA1060.12093002030711662No Hit
ATTCAAGGGTTGCAGAGGGAAATTATTTGTGATTAACAGATTTCTTTGAACA1040.11864832181075592No Hit
GGAAACGGGGGTATAAATATTATTTATTTCAGGTAGAATTTTTTTGGTGTAG1040.11864832181075592No Hit
GATGCAGGGATTCTTAAGGTATGTACATTTTTTAGAAATTTAAGACTGTAGT1040.11864832181075592No Hit
ACTTAAGGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTA1030.11750747256257559No Hit
GATTTGGGGGAGTTTTATCTATGCTTGCACATATATAGAATGTAAAAATATA1030.11750747256257559No Hit
TTAGCCGGGCACTTTTAAATTCATCATAGTTAAGGTTTCTGTGAAGACCATA1030.11750747256257559No Hit
AAAAATGGGTATGAATGTGACGTAGCTTATTTGTTCATTATTTGTGGACATT1030.11750747256257559No Hit
AGTCGCCGGGGGAGCACAGTCTGAGGAGAGAGCAGGGTCAAACACAGCCCGG1030.11750747256257559No Hit
GTACCAGGGATTGACGGCAAATCTATACTGTTCCTTGGTTTTAGAGTTGGGT1030.11750747256257559No Hit
TCGCTTGGGATGGATACCCCATTTACCCTGTGATTATTATGCATTGCACGCC1020.11636662331439523No Hit
TATAAAGGGAGGGGAAAAGCCTTATGGGTGCAGTGAATGTGGGAAAGCTTTT1020.11636662331439523No Hit
GTGGAAGGGCAACTTGTCTTTGCTGTACTAGGCCACAAAATCCACTGTTAGG1020.11636662331439523No Hit
ACTTGGGAGAGCAGAGGCCATGACATTGGGGAGCTTGTTTAAAAATCAATGA1020.11636662331439523No Hit
AAGCAGGGGATATGGCAGCTTCAGAAAAAGAAATACAGAGTCCTTGGTATAA1020.11636662331439523No Hit
TTCCATGGGTAGAGAACATGTTCTATAGAAGAGACAGAAGATGAAACTAGAT1020.11636662331439523No Hit
TACGACGGGACCCACCGTGGAAGCTGAAGAAGGGAAGTATTTCCTGTCTCTC1010.11522577406621488No Hit
CACACCGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTAA1010.11522577406621488No Hit
TTTATTGGGGTCAAACAGAATTTTTCTTTGAATCAGACAAGTTCAAGCTCTA1010.11522577406621488No Hit
ACCTGGGCGAGACGTCGGCTTTCCAACCTGGCAGGACCCAGGACGCATTGCT1010.11522577406621488No Hit
CGCGAAGGGCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGAA1000.11408492481803453No Hit
GTTAAAGGGTATTGCACTGAAGAAGGTTGCATCACGGCTCAAGAAAAAAAGG1000.11408492481803453No Hit
AATGTCGGGAGGGCTGCCACGGCAACCGCCAAGCCCCCCTCAAGGTGGGACA1000.11408492481803453No Hit
TACTATGGGAAGAACAAATAAGATAGTTACCACGTGGTCATCTTTTACAAAC1000.11408492481803453No Hit
GTATATGGGTGCTCTTGATATTGTGTGAAACTCGTCAGGGTTACCACCAGTT1000.11408492481803453No Hit
ATTTGGGCCAGGGCTGCTGAGGGCTGCCTCTTGACAGTGCAGTCTTATCGAG1000.11408492481803453No Hit
CACACGGGCGATCTAGTCGAGGGGCCCGGGAGCCAACCGAGGGCGTTCCTGT1000.11408492481803453No Hit
AATTATGGGTCTTGGAGTGGGTGCAACTAAACCTAAGAAACTACCACTTGCT1000.11408492481803453No Hit
TAGCTGGGTACAGAATCAGAGATGATGCAGTGTTTGAAGTTGGGTGCTTTAT990.1129440755698542No Hit
ATGCAAGGGCCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGG990.1129440755698542No Hit
AGTCCAGGGCAGAACTAGACGCCATGGCTGCATTGAATGATATACGGTATCA990.1129440755698542No Hit
GAAGCTGGGAGGGTTTTCCTGGACAACAATCCCTGGGTCTGCGACTGCCACA990.1129440755698542No Hit
GAAAAAGGGACTTATGCCGCCAGTATCTCGTATGATTTGAACCGGCTCCCAA980.11180322632167385No Hit
AACTTTGGGCAGCCACAGAAGAGAGCACTGTGCCCACCACCCAAAGCAGTGC980.11180322632167385No Hit
GACTAAGGGAATCACATTACTTTTATTCACATCTGTCTACTGATGCCATTCC980.11180322632167385No Hit
TCTTTAGGGGTGCTCGCTTCGGCAGCACATATACTAAAATTGGAACGATACA980.11180322632167385No Hit
TTGTGCAGGGAGCAGAGTTGTATGAGAAGACGGACAAGCTAGATGAAGCCCT980.11180322632167385No Hit
GGATAAGGGATAGCAGGCTACTGCTTCAACATATGCATTTGGGGGAGGGGAC970.1106623770734935No Hit
GATGCCGGGACGAGGGAAGAAGGAACCAGACCTTAGTGCCACATATTTTTCT970.1106623770734935No Hit
CCAGCAGGGCTGTGGAGAGGAGACAGCGCTCATCGAGTCCATTGAGGGCAAG960.10952152782531316No Hit
ATGATAGGGATTGGAGAGATGCTGTCTGCTCTGTGAGTTTTGTAAAGAGAAA960.10952152782531316No Hit
CAAGGAGGGGGGGAAGAAGCGCTTTGGGCACATTTGCAGCAGCCACCCCTCC960.10952152782531316No Hit
ATGCACGGGGGCGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTAT960.10952152782531316No Hit
ACCAAAGGGGGCTTGAGAGTAAAACTCCTAGAACCAGTTCCTGTTTCTGTAA960.10952152782531316No Hit
ATGAGAGGGAGTGAATGCATACACAAATACATATGCATATGACATCAAAAGG950.10838067857713281No Hit
GGTTTTGGGCCTCCCTGTAAGAGAGAAAATCAGAAGAATTTGGAAAGTGTCA950.10838067857713281No Hit
TGCACAGGGCATGTACAAAGTTTGGAAAGATGAAAAAAAGAGGTAGCTTTTA950.10838067857713281No Hit
CTAACTCTGGGAGGAAGAAATACAAATTTTGTCATGTTTCTCAAGCAGTGTT950.10838067857713281No Hit
CTAAAACGGGGTCTCTTAATGCATCCATAGAAAAGTGTTAATTGTGGGTTCA950.10838067857713281No Hit
TTCAATCGGGGGCGGGACACTCACTCAATATGAAGGCAAACTGAGACTGGTG950.10838067857713281No Hit
TGTTGCGGGTACGGCGGGCCAGGAGTTGAGGGCAGCCTGGGCAACACAGCGA950.10838067857713281No Hit
TGTAGCGGGACTCCTTCTGGACTGTGGATACTGAATCAGTGTACTATTGGCT940.10723982932895246No Hit
ACAATTGGGATATCCACTCTGTCTTAAATGAACATTCAGAACTAGGGTACCA940.10723982932895246No Hit
GAAAATGGGGGAATAATCTCCCATATTGTAACTTACTACTCCGGAAAAAAAG940.10723982932895246No Hit
GTACAAGGGGCAGAGCAGATGAGCTTTGGGTTATATTTTTTCTGGTGCATGA940.10723982932895246No Hit
CGGGTTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA930.10609898008077212No Hit
CTACCAGGGTCCATTCAAGTGGAAAAGCTGAATACTGGAGAATTAGTGCAGT930.10609898008077212No Hit
AGAAAAGGGGACCGGGTCTCAGAAGCAGATATCCAGAGGCTGCTTCATGGTG930.10609898008077212No Hit
TGCAAAGGGAGCCTACCCCTTCCTTGTACTATCCCTATGAGGCATAATTATA930.10609898008077212No Hit
CCGGCGGGGCTCATACCGGGGACTGTGGATACTGAATCAGTGTACTATTGGC920.1049581308325918No Hit
CAATGAGGGATGTGAAGTTGATGGGTGAACGGGTATGTGATGATTGCTTACT920.1049581308325918No Hit
TAATTGGGGTGCGCTTGGGGACGCTCTTCCGATCTTGCAGGGCAACTTGAAC920.1049581308325918No Hit
TACAGTGGGAGTGTTCAAATCGTTTGCCCTTTAAAAAAACGGATCATTTGGA920.1049581308325918No Hit
GTGTCTGGGGTGCTGTAATCTGCTAAAATCAGTATCTGATTACAAATAAATG920.1049581308325918No Hit
GCTCGCGGGTGTTCTTGGCACCTTTGTCAAAAGGCAATTCACTGCAAATGTG920.1049581308325918No Hit
GCTAAAGGGTCTGCCTACTTTACCACAACTTCCTTCTTGCAACACTGTTTTA920.1049581308325918No Hit
TATTACGGGTGCCCAGTGGCAGAAGAGACCAGCCCTCCTCCCATGCCCGGTC910.10381728158441145No Hit
AAAATGGGAGCTTTCTGTAGCAGAGATCACCAATGCTTGCTTTGAGCCAGCC910.10381728158441145No Hit
TGTTGCGGGAATAATCATAATGGCTATAGCAATAAAACTAGGAATAGCCCCC910.10381728158441145No Hit
TCAGTGGGGCTGGGAGGTGTACCCAACAGCTCATTGAGAACGGGCCATGATG910.10381728158441145No Hit
CACCACGGGGCTAGTCCAGTGCTTGGCCAGTACAAGGCCATTATATATTTGT910.10381728158441145No Hit
TAGTGGGGAACTTCGGAGGATGGAAGAGCTGCACAACCAAGAGGTGCAAAAA910.10381728158441145No Hit
CATTGGGATATTTATTATTGCAAACATTCCACTACCACTGGGGACTGTCACC910.10381728158441145No Hit
ATCTTAGGGGCCATCAATTTCATCACAACAATTATCAATATAAAACCCCCTG900.1026764323362311No Hit
GCCATTGGGAATTCTACTTAATACGCAAGGCTCAGTATAAAACCTGACATTT900.1026764323362311No Hit
GCCACGGGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTA900.1026764323362311No Hit
GTCGCAGGGAGAGGAACATGCAAAATGTTGCCCATCTATTTAGGGACAATCA900.1026764323362311No Hit
GTGTTGGGCTGTGGGAAATCTGTGAGAGGGAATGGGGTGGGAGATGTGGGGG900.1026764323362311No Hit
CCTTCCGGGATTTCTAGTTTTGTGACTTTGGGCAAGGCTCATTTTCTTTTTC900.1026764323362311No Hit
ATTTGGGGGGATCCTACTATCTGTAGATAAATAAGTAATTTTTTTGAGAATT900.1026764323362311No Hit
CACAACGGGAATGAGAGAAGGACCAAAGACATTATATTTCTTGGGTTTTATT900.1026764323362311No Hit
ACTGGGGTACCAGCCCACCGGGGGACAGCTGCTGTTGGATGGGAAGCCCCTT900.1026764323362311No Hit
TGTTATGGGGCACACTCACATGCCCACTTGCACACACAGCACACAAGTATCA900.1026764323362311No Hit
TGTTCCGGGTATATGACTGAGTTGAACTGCAACACCTCTTCATAGGCCTCCA900.1026764323362311No Hit
TTTGTGGGGATCTTGGGCTTCATTTTAGGCTCATGTGTCAGATCTGCATGCA900.1026764323362311No Hit
ACAGGTGGGATGATGATGGTGATGATGACGATGAGTTTAATCATTGTTCATT900.1026764323362311No Hit
TCTTTTGGGATTATCTAGTAGGTCTGCACACATAACACACATCAGTCCACCC890.10153558308805075No Hit
AGAAAAGGGGGGCCCTATTGTGAACCTAATGAATCAGTATCTCTGGGATGAA890.10153558308805075No Hit
GTACACGGGCCTCGGAGATGCCATCTCTGTCTCCCTGGGTGCCAGCAGCCCT890.10153558308805075No Hit
TAACGTGGGAATTAAAGCAATTGGGAACGAGGTAACAGTTGACAAATGGGAA890.10153558308805075No Hit
GTATCAGGGCATGTAACTCCTTCTCCTTCAGAGAGCAGTAGCAGCAGAGCAG880.10039473383987041No Hit
GAAGATGGGGCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAA880.10039473383987041No Hit
AGTTCCGGAGTGAGCTGAGATCGTGCCACTGTATTCTAGCCTGGGCAACACA880.10039473383987041No Hit
TATGGCAGGGTCCCATAGAGCCTCTATCTACAACCTCTCAAAGAATAAAAAA880.10039473383987041No Hit
TGCAAGGGTAAGGGAACTGGGACACGCAGAGCATGAAATCACTGAGCTCACG880.10039473383987041No Hit
GACAGTGGGGGGAGTGACAGCTGCGCTGCCGGCCCGGCTGCGGTCAGCAACG880.10039473383987041No Hit
AGGCAAGGGCTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAAG880.10039473383987041No Hit
AAAACAGGGATGGACCTTTTATTATTATTATTATTTGTAGTATAGCGCTTCC880.10039473383987041No Hit
CACTATGGGTCTGCAGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCAT880.10039473383987041No Hit
GAGTAAGGGGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGGTAGCATAAT880.10039473383987041No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)