FastQCFastQC Report
Sat 31 Dec 2022
SRR5847986.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847986.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85484
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACATTGCGTCATCTCGTATGCCGTCT11041.2914697487249076No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACATTGCGTCATCTCGTATGC9601.1230171728042675No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACATTGCGTC1550.181320481025689No Hit
CCCTCCACTGATATTCTAGCATTTATGGGTTTACTTTTGTTTACCTTTTGGA1480.1731318141406579No Hit
CTATGCGGGTGAACAATTAGAAGTACACTTGAAAACATATCAATAAATATGT1390.1626035281456179No Hit
TTGCGAGGGTAATAGAGAAATAGAAAAAAGAATAGAAAATTCAGCCCCACAT1320.15441486126058676No Hit
TGCGTGGGGGACCCTTTCCTTTTACACATGAGGAATGTAAGCCCAAAGAAGG1310.15324505170558234No Hit
TAAGCTGGGAGAACATATATATAAATGAACAGATGGGTGCTTTTTTTTTTTT1270.14856581348556455No Hit
GCCGAAGGGTGCTGCTTTTTGTGAGCTCCTTTTACAAAGAATACCTTTCTGT1270.14856581348556455No Hit
AGTAGTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1220.14271676571054231No Hit
TATGCCGGGGCTATGGGCCGCAACAAGAAGAAGAAGCGAGATGGTGACGACC1220.14271676571054231No Hit
TGTACTCGGGGCACGAGAACGAAGTTCTTCGTCACCAGCTCTTTGCTGCCCC1210.14154695615553786No Hit
CGGGTTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1200.14037714660053344No Hit
CTTTTTGGGACAGATGAAGGAATGTTTTATAGTAATTTAATTTGCTCCTGTA1160.13569790838051565No Hit
TGAACGGGACCATCCCCTGTTCTTTGACTGATGAAATCGGCATATGATAAGG1140.13335828927050677No Hit
GTACCAGGGATTGACGGCAAATCTATACTGTTCCTTGGTTTTAGAGTTGGGT1140.13335828927050677No Hit
ACTTAAGGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTA1120.13101867016049787No Hit
AACTTGGGGAGAGAAGCGGGGCGAACTGAGGCGAGTGAAGTGGACTCTGAGG1120.13101867016049787No Hit
GAACTGGGCTAATGCTTACCGAACGAAAAATTCTAGGCTATATACAACTACG1100.128679051050489No Hit
CTCTAAGGGGAACAAATGTTTAACTTTTACCAATGACGTTAGTACAAACAAG1100.128679051050489No Hit
GTGGAAGGGCAACTTGTCTTTGCTGTACTAGGCCACAAAATCCACTGTTAGG1100.128679051050489No Hit
ACAACAGGGTATTGTATTTGTAACAGTATGTGTTTAAAAATAAGTATAAATA1100.128679051050489No Hit
ATTCAAGGGTTGCAGAGGGAAATTATTTGTGATTAACAGATTTCTTTGAACA1080.12633943194048008No Hit
GGCTCCGGGCAATGGATTCATGGAGTAGCCTGGACTGTTTCATAGTTTTCTA1070.12516962238547563No Hit
ATTTCTGGGGAGACGAAATAACATGAGCCACTATAATTATTGGCTCAGTTCC1060.1239998128304712No Hit
GTGCCCTGGTCGGGAGTCATATGCCTTAAAAATGACTGCGAGTCAGTGTGAA1060.1239998128304712No Hit
GTCTCTGGGGGGGGCCGGATAATGGCGGGCGCTGCAGAAGATGCGCGAGCTC1060.1239998128304712No Hit
GTTTATGGGACTTCAGCAACTCCTCTGAAAGATAACACACAACAGTTTAGAG1050.12283000327546675No Hit
AATCTAGGGTCCGATCTTTTGCAGGGAGGTGTTGGCATTCTTCGCTGATTTG1040.1216601937204623No Hit
TAACGTGGGCTTCCGATCTTGTCTAGGGACAGCGCGCGGGGCGAGCCAGCGA1040.1216601937204623No Hit
ATGCCGGGGCACACCCGCCCCAACGCGTTCTCTGGAGCTTTGGGCCTCAGGG1040.1216601937204623No Hit
ATGAACGGGGCGGCGTGGGAGGCTGCGCGGCGATGCTGCAGTTCGTCCGGGC1030.12049038416545788No Hit
GTTAAAGGGTATTGCACTGAAGAAGGTTGCATCACGGCTCAAGAAAAAAAGG1020.11932057461045342No Hit
ATGATAGGGATTGGAGAGATGCTGTCTGCTCTGTGAGTTTTGTAAAGAGAAA1020.11932057461045342No Hit
TTAGCCAGGGACTGACAATTAACAGCCCAATATCTACAATCAACCAACAAGT1020.11932057461045342No Hit
TTCACGCGGGGACAGATGTTACTGCTGGTAGTGCTGCTTCTAATAGAGATTA1020.11932057461045342No Hit
CACCACGGGGCTAGTCCAGTGCTTGGCCAGTACAAGGCCATTATATATTTGT1010.11815076505544897No Hit
TGCTTAGGGTGTTATAATTTAGTTCACAGGGATCTTAATTGGCTTTCATCAC1010.11815076505544897No Hit
CTTATACACATCTCCGAGCCCACGAGACATTGCGTCATCCTGTCTCTTATAC1000.11698095550044453No Hit
CAGTGGGGGTCATCTTCATTTCTTTCTGTAAATACATATTGAGACCTCTAAC1000.11698095550044453No Hit
ACAGCAGGGATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGCC1000.11698095550044453No Hit
CACTGAGGGGGACTCATAATAGTTACAATCGGCATCAACCAACCACACCTAG990.11581114594544008No Hit
AAGCTAGGGATAACAGAAAGCTGGAAAATTCCAAAGTACTTGCAGATTAAAC990.11581114594544008No Hit
TAAACTGGGAGCAGCTTCCTAGTTAACAACCCCCATGCTGCCTCCAGTCTTT990.11581114594544008No Hit
AAGCCTGGGATTCTTTAAAAATCTTGCAATGTGCAAAATTATGCAGTGAAAA990.11581114594544008No Hit
GTTAGCGGGGAGGGGCACCAACTCTTCCTGTGCAACGTGGAGCGTAGTGTGA990.11581114594544008No Hit
CATTGGGATATTTATTATTGCAAACATTCCACTACCACTGGGGACTGTCACC990.11581114594544008No Hit
ACAGGTGGGATGATGATGGTGATGATGACGATGAGTTTAATCATTGTTCATT990.11581114594544008No Hit
TTTACTGGGAGTTAGCAATAATTTATTGTATATTTCAAAATAGCTAGAAGAG980.11464133639043562No Hit
TACTAGGGGTCTAGGGCTGTTAGAAGTCCTAGGAAAGTGACAGCGAGGGCTG980.11464133639043562No Hit
CATCGGGGTTAACTCTAGCCCTGACCTCTATTGATCTTTTGGGAATGAGGGC980.11464133639043562No Hit
ATCTTAGGGGCCATCAATTTCATCACAACAATTATCAATATAAAACCCCCTG970.1134715268354312No Hit
TCGCTTGGGAGCTGAGTCTGGAACATATGAAGTGAGGTTTACTTCTAAGAAC970.1134715268354312No Hit
GCGTGCGGGATGGACCCAAATCCTCGGGCCGCCCTGGAGCGCCAGCAGCTCC970.1134715268354312No Hit
TACGACGGGACCCACCGTGGAAGCTGAAGAAGGGAAGTATTTCCTGTCTCTC970.1134715268354312No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACATTGCGTCA960.11230171728042675No Hit
CAGCCTGGGTGACAGAGCGAGACTCTGTCTTAAAACAAAACAAAAAAGATTA960.11230171728042675No Hit
ATGCTCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC960.11230171728042675No Hit
GCCAACGGGGGACCAATCTATCACCCTATAGAAGAACTAATGTTAGTATAAG960.11230171728042675No Hit
TGTTCCGGGTATATGACTGAGTTGAACTGCAACACCTCTTCATAGGCCTCCA960.11230171728042675No Hit
GCTTGTCTTCCTTTCTGATTCTTCATGTAGTTCTTCCTGTGTTTCTTAGCAT950.1111319077254223No Hit
ACAATTGGGATATCCACTCTGTCTTAAATGAACATTCAGAACTAGGGTACCA950.1111319077254223No Hit
CCAGCAGGGTGGGAAAAATATATTAAAAACATAGGATTTCCCTCACCTGCCA950.1111319077254223No Hit
TATACTGGGATTAAGATTTATAGTATCAGAAAGGAGATCTCATGGATAAGGT950.1111319077254223No Hit
TATAAAGGGAGGGGAAAAGCCTTATGGGTGCAGTGAATGTGGGAAAGCTTTT950.1111319077254223No Hit
TGCTAAGGGGGAGGGAAGGAATGTTACATAACTAAGTGGAGGCCTGGAACTG950.1111319077254223No Hit
CACACCGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTAA950.1111319077254223No Hit
GGATGGGGGGATTAACAAGTTAGAGGTTAAAAAAAGAAAATAAAAGATACTC950.1111319077254223No Hit
TACATAGGGACGCATCTTCCGTACTGCTTGTATTAGGATGCAAGATTGAATG950.1111319077254223No Hit
CGTTATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA940.10996209817041785No Hit
CGCCAAGGGAATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACC940.10996209817041785No Hit
GCAAAAGGGATCCTGGTGGCTAGCCAGTGCGGGGAGGCCCTGCCCTGGGATA940.10996209817041785No Hit
CACGCGGGGATAGATCACAGGCTTTTGCAATAAGAAAACAATCACTTGGGAT940.10996209817041785No Hit
GTTTGAGGTCCGGAAAAAAAGAACCATTTGGATACATAGGTATGGTCTGAGC940.10996209817041785No Hit
TGTTGCGGGTACGGCGGGCCAGGAGTTGAGGGCAGCCTGGGCAACACAGCGA940.10996209817041785No Hit
TCGAGGGGGGCGCAGTAGCTGGTGCCTTCCCGGAAGGGCTCAGAGGCGGGCT930.1087922886154134No Hit
CGCGAAGGGCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGAA930.1087922886154134No Hit
TTCGCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC930.1087922886154134No Hit
CCGGCGGGGCTCATACCGGGGACTGTGGATACTGAATCAGTGTACTATTGGC930.1087922886154134No Hit
GATTTGGGGGAGTTTTATCTATGCTTGCACATATATAGAATGTAAAAATATA930.1087922886154134No Hit
ATAAGAGGGTTAGTCTACTGACTGCAAATGAACACTGGACTCCATGCATATT930.1087922886154134No Hit
CGCATGGGGATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCC920.10762247906040895No Hit
ATATTAGGGACTTCTCAACCAACTTGTTTTCTTTGCTCCACAAGCAATCACG920.10762247906040895No Hit
CAATGGGGGGCCTTAGAGATCGCCTGAAGAGCGGAAGCCTTCTGTCGAGAAG920.10762247906040895No Hit
CGGGCTGGGCCCAATATTGTTAAAAGGAGAATTCTTATGTATACCTATCTCT920.10762247906040895No Hit
CACACGGGCGATCTAGTCGAGGGGCCCGGGAGCCAACCGAGGGCGTTCCTGT920.10762247906040895No Hit
TAGCATGGGAACTGTTATGATTGTGTTAAGTGCTATGGATGAAAAGTACAGG920.10762247906040895No Hit
GATGCAGGGATTCTTAAGGTATGTACATTTTTTAGAAATTTAAGACTGTAGT920.10762247906040895No Hit
AGTTTAGGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTA910.10645266950540452No Hit
CACATAGGGGAGCCGCAGGAGGCACAGGCCTGTCCTGGGTCCCCGCAGGTCT910.10645266950540452No Hit
AAAATGGGAGCTTTCTGTAGCAGAGATCACCAATGCTTGCTTTGAGCCAGCC910.10645266950540452No Hit
GCTTATGGGATTCAAGTTGTTTGATACCAGACAGAAAGCTGACAGTCTGTTC910.10645266950540452No Hit
TATGGCAGGGTCCCATAGAGCCTCTATCTACAACCTCTCAAAGAATAAAAAA910.10645266950540452No Hit
TGCTCTGGGGCTGGCCAAGGGGTTTTGGTGCATGTCCAGTTAGGCTTTTCTC910.10645266950540452No Hit
CATTCAGGGCTAAAAGGATGAAAAAAATTAGCAAACCGAAGTTTCTTCAATG910.10645266950540452No Hit
CTTCTTCGGGGATTCCAAATCACTTTTCTTCCCTTTTAAACAAACAGAAATC910.10645266950540452No Hit
TAGCTGGGTACAGAATCAGAGATGATGCAGTGTTTGAAGTTGGGTGCTTTAT900.10528285995040007No Hit
AGAAAAGGGGGGCCCTATTGTGAACCTAATGAATCAGTATCTCTGGGATGAA900.10528285995040007No Hit
TACCAAGGGGGCCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAA900.10528285995040007No Hit
ACTTAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC900.10528285995040007No Hit
GTACAGGGGGTTCTGAGGATTCCAAACAGAGGCATTGATTTACTGAAAAAAG900.10528285995040007No Hit
ATCGCGGGGGCTTCCCGGGTTCAAGCATTTCTCCTGTCTCAGCCTCCCCAGT900.10528285995040007No Hit
TTTATTGGGGTCAAACAGAATTTTTCTTTGAATCAGACAAGTTCAAGCTCTA900.10528285995040007No Hit
GTGGTAGGGTAGTCCTGGAAATAGACATACCCAAATTATACAGAGCAGGAAC900.10528285995040007No Hit
TTTCAAGGGAGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGCGT900.10528285995040007No Hit
CTCAGCGGGGCCCGCCATCATCCTAGTCCTCATCGCCCTCCCATCCCTACGC890.10411305039539565No Hit
TCGAGAGGGACTACCTTAATGATAAGGACTCCTTAAAGTTCCATTTGCTAAT890.10411305039539565No Hit
CTAAGAAAGGGAAGACCTGTCTTACAAAAGATTCCAAACGGAGTCTTTTATT890.10411305039539565No Hit
GCAAGGGGATGCGGGGGAGGGCGGGGCGTGGCAGGAGCAAGCGTCTGCCGCG890.10411305039539565No Hit
GTTAAAGGGAGGTTATCAGGAACTTTGTTTCCTTCTGTCTTATTCAGCCATT890.10411305039539565No Hit
TGCTCTGGGCCGGCTGCTGGAGGAAGCAGCTATCCACAAAGCTTCCTGCCCC890.10411305039539565No Hit
GATAAGGGGTTGCTGACTCCGTCCACCCTGTTCCTGTTAGATGAGGATGCTG880.10294324084039119No Hit
GAGACAGGTGGAAACCAAGGTTCGAGCTAAAATCCGTAAGATGAAGGTGACA880.10294324084039119No Hit
AGCCGGGACAGAAGAAAAAAACAACTCAAGCATTCTGGTGGCAACATAGAGA880.10294324084039119No Hit
GTATCTGGGAACAAAAGCTTGTGATCTGACCCATTCCTTTGCTGCCTTCCTT880.10294324084039119No Hit
CGGCTCGGGAGAGGAAGAGTTCATTGCTGTTGAAACTCATAGCTGTTGTCTT880.10294324084039119No Hit
ACAACAGGGACAAGACCCTCCCCATAAGCAGGGGACCAGCATACCCGGGAGC880.10294324084039119No Hit
ACCTGGGCGAGACGTCGGCTTTCCAACCTGGCAGGACCCAGGACGCATTGCT880.10294324084039119No Hit
GAAGATGGGACTTTAAGTAAATTCCTACCCATACTTCTTACTTGTCTCCTTT870.10177343128538674No Hit
TTTTGAGGGTCTCTGGCATGGAATTGTTAATTTTCTGACACGTCTAGATGTG870.10177343128538674No Hit
AGAAAAGGGGACCGGGTCTCAGAAGCAGATATCCAGAGGCTGCTTCATGGTG870.10177343128538674No Hit
CAGTCAGGGTCTATTTATGTATATTAATAGATTTTTGGGTCTTATAGCCAGC870.10177343128538674No Hit
TTATTGGGGCCTGCAATTCCAGAAGGTGTTCCCACTGATACAAAAAACAAGG870.10177343128538674No Hit
GATGCCGGGACGAGGGAAGAAGGAACCAGACCTTAGTGCCACATATTTTTCT870.10177343128538674No Hit
GACACTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA870.10177343128538674No Hit
CCCAGATGCAGGATGTTTTCAACCAGTAAATTTTATTGCTGTTGGTGCCAGA870.10177343128538674No Hit
TCTTTAGGGGTGCTCGCTTCGGCAGCACATATACTAAAATTGGAACGATACA860.1006036217303823No Hit
TTAACCGGGCCTCGGAAGTTGTTTTACCTACTTTAAAAGTTTTAATGGATTG860.1006036217303823No Hit
ACTGGGGTACCAGCCCACCGGGGGACAGCTGCTGTTGGATGGGAAGCCCCTT860.1006036217303823No Hit
GTATATGGGTGCTCTTGATATTGTGTGAAACTCGTCAGGGTTACCACCAGTT860.1006036217303823No Hit
CTAACTCTGGGAGGAAGAAATACAAATTTTGTCATGTTTCTCAAGCAGTGTT860.1006036217303823No Hit
GCCGATGGGAATGCAAGAATTCCCATGTGTGAGTCTTCACCATAGTGGAATA860.1006036217303823No Hit
AATGCAGGGGGCTGTGTTGTCAGCACTGTAACTTCGCAGAAAAGAGTCGGAT860.1006036217303823No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)