FastQCFastQC Report
Sat 31 Dec 2022
SRR5847810.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847810.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79965
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTATCTCGTATGC10621.3280810354530108No Hit
CTTATACACATCTCCGAGCCCACGAGACACACAACTATCTCGTATGCCGTCT9471.1842681173013192No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACT1980.24760832864378166No Hit
CTTATACACATCTCCGAGCCCACGAGACACACAACTATCCTGTCTCTTATAC1730.2163446507847183No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTATCCTGTCTCT1180.14756455949477895No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTA880.11004814606390297No Hit
ATGCGTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC830.10379541049209029No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)