FastQCFastQC Report
Sat 31 Dec 2022
SRR5847795.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847795.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32925
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACACACAACTATCTCGTATGCCGTCT13254.024297646165528No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTATCTCGTATGC12273.726651480637813No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACT2750.8352315869400152No Hit
CTTATACACATCTCCGAGCCCACGAGACACACAACTATCCTGTCTCTTATAC1790.5436598329536826No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTATCCTGTCTCT1320.40091116173120733No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTA1150.3492786636294609No Hit
ATCTGAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTAT1030.3128321943811693No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTAACTCGTATGC1000.30372057706909644No Hit
CTTATACACATCTCCGAGCCCACGAGACACACAACTACTGTCTCTTATACAC990.30068337129840544No Hit
AAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTATCTC820.24905087319665908No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTACTGTCTCTTA700.21260440394836752No Hit
ATATGTGGGGACTGCAGCTGGAAGATGGCGGCGTCCGTGGTCTGTCGGGCCG700.21260440394836752No Hit
TTATGCCGGGGAGGTGGCGGCGGCGAAGGATGCACCCGGCAGGCTTGGCGGC660.20045558086560367No Hit
ATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTATCTCGT650.19741837509491267No Hit
TCTCCTGGGAAGTACTCAAAATTACATAGTTCATTTCTAAGAGAAGGCCATG630.19134396355353075No Hit
CTGCAAGGGGTTCGGGTCTAGGCAAGTAGCTCACAGGAATATAGGAGAGGTA620.18830675778283978No Hit
CTCAGCGGGGCCATTAAGTTGTAAAATCAAACCAAGAAATCAAATTGTCAGT620.18830675778283978No Hit
GTCAATGGGAGTAACATTTATTTGAATTCTGTCTTGGATTAGCTTTTCCAAA610.18526955201214884No Hit
GTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTATCTCGTATGCC600.18223234624145787No Hit
TTCAGTGGGTCTAGTGGAGGGAGGTAGGCATTGAGGCAGCCAGCGCAGGGGC570.173120728929385No Hit
AGCGGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAG550.16704631738800305No Hit
TGCAAAGGGAGGTGCAGACTGTGTTGGTGGCGGTAATTTTGTCCATCAAATG530.1609719058466211No Hit
TCATTTGGGACAAAGAAGAGCATCCGTTCGAGAAGCGCCGCTCTGAGGGCGA530.1609719058466211No Hit
GGTCGGGGGGAAATGTCGATTTTCAATAATAGACTTATATGCAGGCTGTCGT530.1609719058466211No Hit
TCATAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA530.1609719058466211No Hit
GAGTGGGGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTA530.1609719058466211No Hit
TGCTTAGGGTCAAGTGGAGGAAAGGACTTGTTCTGATTCAGAAGATATTGGA510.1548974943052392No Hit
AGCATTGGGTGCCGTAACTTCCTACCTTGATTGTCTATTGCCACTCTCTTTG510.1548974943052392No Hit
GCTGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTATCTCGTAT500.15186028853454822No Hit
AAAGTCGGGACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAG500.15186028853454822No Hit
AGTGTAGGGTTTCCAGGAGGGAGGGGCGATTCTACCTTGTTTGCAGTGAATG500.15186028853454822No Hit
TGTTGTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC490.14882308276385725No Hit
GTTCGCGGGGAAACACAATATGGTACTACATAGCAAGGGCTGTAAAAATGAC490.14882308276385725No Hit
GTTGCTGGGATTGAACAGTACTGCTCCTTGTGAAGCAGGGCTAGTTCAGAGG480.1457858769931663No Hit
ACTGGTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC480.1457858769931663No Hit
TCGAGCGGGAAGTATATACTTTAAGAAATTCAGGTTTGACTGTATCTACTTC470.14274867122247534No Hit
TTGTGTGGGGAATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTAC470.14274867122247534No Hit
GACCTTGGGTTCCGATCTCTGCGGGTGGGAGGGTGGAGCACTGGCTCCTTGA460.13971146545178437No Hit
TCATAAGGGCACCTTAGCAATGACAGGGTTTGAAAGGAATTCCCAAGTGACT460.13971146545178437No Hit
ATCATAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC460.13971146545178437No Hit
GGTCGCGGGGGAACTAAAATATATAATGCCAAATGTGTTTTTGTCAATTACT450.1366742596810934No Hit
GTGACAGGGATTGAAACATAAAATTAATAATGAAAGTGAGAACAGATGTCTG450.1366742596810934No Hit
TAATAAGGGCTGGGAATAAAAGGAACTTTTTTAAAAAAATTAATTAGTCCAC450.1366742596810934No Hit
ACTCGCGGGATGTTTACCAAAAAACTCAAACAAATGAGCAGTGCCTGTTCAA450.1366742596810934No Hit
TCTCCAGGGGGACACTATTCTCTCTGGAGGCAATATGGATGAGTTCTTACGG440.13363705391040243No Hit
TGATCAGGGATTACAGTTAGGTTCACATGAGAGAATGCTTGTAGAAGTACCT440.13363705391040243No Hit
TTAGTGGGGATGTTGCTGCTGTGCTTGTACAGCCTGCAGAACTGCAAGCCAA440.13363705391040243No Hit
ACGACGGGGATGGGGTTGTTTGTTTTTCACTGACCATCAGAGAAATGCAAAT440.13363705391040243No Hit
TTTGTTGGGGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGAA430.13059984813971148No Hit
GATCGGGGGTCCATAACGGGGAGGACGTTGTGCTCCTCACCACCTGCAAGCA430.13059984813971148No Hit
TGGGCTAGGGCTGTATTTGCGGAGTGAATAATACTCTTTCCTCCTAGTGCAT430.13059984813971148No Hit
CAGCTGGGGGCGGCGGGCGGAACGGTGTCTCCTTCACTTCGCCCTCCAGCTG430.13059984813971148No Hit
CAAAGTGGGGATTTTAAAGAAGATAAATATATTGTAATTTCACATGCTATAG420.1275626423690205No Hit
TGTGCAGGGAATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACC420.1275626423690205No Hit
AAATTAGGGATTCGAACTTCGGGCGTGCATCCAAGATTTGATTTTTCAGCAG420.1275626423690205No Hit
AAGCTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC420.1275626423690205No Hit
GGCGGTTGGGGTAATGCTGGTTCTCAGTGGAGTTTGTTCTGTGATGTTCAGC420.1275626423690205No Hit
AGTTGCGGGCTTTCTGGCTCTTTTCCACCTTTAACACTCTTATGTTGAAATC420.1275626423690205No Hit
ACACATGGGGAGGAAACATTCAGGAAATTCAGACTCGCCAGGACAACAAAGT420.1275626423690205No Hit
GATTCAGGGCTAAAATACATGTGGAAGGATTTGATTTTCATAAATATGGACA410.12452543659832954No Hit
TGTTAGGGGACTTAGAGCTGTATTCAAGTTGTTTGATACCAGACAGAAAGCT410.12452543659832954No Hit
TTCGCCGGGGTCTCAGAGTCTTTTTATTTTTCTTCTCAAAAATTAAGGTGAT410.12452543659832954No Hit
ATGCCGGGGCAAGTGTTTTGACGATATACTCCTGAGCTTTCACTCTGCTGCT410.12452543659832954No Hit
CAAACCGGGCAGAGAAATTAAAGAAACCAAAGCTTTGCTTTTTTTTCTGGAT410.12452543659832954No Hit
TGTAAGGGATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGA410.12452543659832954No Hit
TTCAAAGGGATCCCTAAATGCATTTGTGTTAATAACTCTGAAACGTTTGTAT410.12452543659832954No Hit
TGCACAGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC410.12452543659832954No Hit
GTCAAGGGGACAGACCAAACCATTTGTATCTGGCATCACTTACTAACACACG410.12452543659832954No Hit
GTGTAAGGGGATATTATGACACTGACACTGCTATTTTGAAACCTGGAGGATG410.12452543659832954No Hit
GGTTATGGGGAAAAAAGTAGACCTAGAAACCCTAAAAGAGGATTCTGAGTTC400.12148823082763857No Hit
AACCCCGGGGGCCTTTTGGCTTTCTCAAGGTGGGATTTAGAAATGGCTCCAT400.12148823082763857No Hit
TCTTAAGGTTCCAAAGGGATTTAGCAGTGAGGCAGCAATGCTGAGTAGGTAG400.12148823082763857No Hit
TTAAGGGAGTTAGTAAAGAAAAGTTTACCATCTGAAAAAGCTGGATTTTCTT400.12148823082763857No Hit
TTAGGTAGGGGACGCAGCCTGCGGCCAGGCTTTTTATTTAATGTAAATAGTT400.12148823082763857No Hit
AGCATGGGGATCTCTTGTGAGAAGGAATCTTTCACTTCTTTTGTTAAATTAA400.12148823082763857No Hit
AGTATAGGGGAGCTGAGCGATCCAGCTTCCACTTTTGTCCCTGAAACTGTCC400.12148823082763857No Hit
ATTCGCGGGGATTAAATGGATATTAAAATAATTGCGGGTGCTTCAGGACTTT400.12148823082763857No Hit
ACATTCGGGTGTCAACATGTACTTTGCTACTGGCTTCAGTGGTCACGGGCTC390.11845102505694761No Hit
AAAGCAGGGATATTATCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGCC390.11845102505694761No Hit
GCCAATGGGATGACAATACAATATTCTAAAATAAGCATAGAAAAAGATATCA390.11845102505694761No Hit
CTTCAGGGACCACAATAAGTAATAAAACATTTTGTAATTCATTCTGTAACAA390.11845102505694761No Hit
GAACGCGGGATTCTGACAAACCTAAAAGTTGTATGGAACATATTTTTTAATG390.11845102505694761No Hit
TTTGGCCGGGCAGTAAAAAGTATAGATAATTTAATTAACTTAGTGACACCAC390.11845102505694761No Hit
TTTAATGGGAGAGGTATGTCCTTTTATGTAATGGCCACCGCATTTAGTATTA390.11845102505694761No Hit
AGAAGAGGGGTCTGAAAGTGGAGAAAGAGAAACCTGAAGCAACAGTAAGAAA390.11845102505694761No Hit
GGCCTGGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC390.11845102505694761No Hit
TTATCTGGGACTCTCTAATTTTTTATATATCCATTTTGTAAGCTATAATACA380.11541381928625664No Hit
AAGAGCGGGTCTCGTGGTCACGCCCGCCAGCTCGATCGGCGGCAACTGGCGT380.11541381928625664No Hit
TTTTTAGGGACGACACCTTCCTGGCTGTGCGCTACTCCCGGGGCCGTCTGAC380.11541381928625664No Hit
TTCAAAGGGGCTGCCACGTAAAACTTCAGAGAAAAATCTTAAAAGCAGACCA380.11541381928625664No Hit
GTCAGGGGGACAGCAGCGACCGCCTCACAGACGAGCTGTGGGAAGCAGGAGG380.11541381928625664No Hit
TTTTGCGGGATCCATAAAGAGCAAAATAGTTTATCACTACTAGAAGCAAGAG380.11541381928625664No Hit
GCTTAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC370.11237661351556569No Hit
CTGAATGGGAAGCTAAACCCCTGTTAGACCTTGAGAGGATGGGGGCAACACT370.11237661351556569No Hit
CACCAAGGGATAGCATTATATGCTATTAGAAAATAAGAAAGATCTTCAGTTA370.11237661351556569No Hit
TATGCTCGGGGCATCTGTTCTCTGAGGAACTCAAGTTTGGTTGCCAGAAAAA370.11237661351556569No Hit
GAGAATGGGATCGACGCCGGTCTGGGCCGCCCGCCGCGCCTGGCCGCCGCCA370.11237661351556569No Hit
TAACCTGGGGGAGTGAGGACGCATGCGCGAGAGGACCCGCCGGGGGTTCAGC370.11237661351556569No Hit
CTTGTAGGGGAGGAGCTAAAATTGAATCATATAAATATTCAACTAAATCTAG370.11237661351556569No Hit
CAGGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGGAATACAGGCGTGAG370.11237661351556569No Hit
CACGCAGGGAAAGATCATTTGTACAGTTCAGTGATCTAGTTTGGTGTGTCCT370.11237661351556569No Hit
TATCATGGGCCAAATAATATTTGAAGTCATCTGTCTCTTTGTAAATTATTTT360.10933940774487472No Hit
AAATATGGGAAGGTTTTCAGCAAGTTGTAACTTATTTTGGCCTAAAAATGAG360.10933940774487472No Hit
TTAGGCGGGGGGCGGCTATCTAGGGGCTGCTGGGAAGATGGCGGACTCGGTG360.10933940774487472No Hit
AAGCTAGGGGAGATTGACTTGGACACTTCAGACCATGCCCACCTGGAGCACA360.10933940774487472No Hit
TACTACGGGATCAAAAGTGACTGCCTTAATAAGAATGGTTGCCTTAAAGAAA360.10933940774487472No Hit
GTTTGGGGGGTTCTATAGCACCACAGGGCGAATACAGTTAAATATAATTTAT360.10933940774487472No Hit
CGTCATGGGATAGTGATTGTATTTTTTGTAATTTTCATTAAGCATTTAATTC360.10933940774487472No Hit
CTCCGGGGTCTGTGAGCTGAGACTGGTTTTTACATTTTTTAATGGTGAAAAA360.10933940774487472No Hit
TTTGTAGGGTAACATTTTCATAGAAAATTCAGAAAACTGCTTGACACAGCAG360.10933940774487472No Hit
TTAAGTGGGCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGAA360.10933940774487472No Hit
AACAGTCGGGACCAAAAGAAAAGTCCAAAAAGAAAGTGGAAGCCAAGTCTAT360.10933940774487472No Hit
TGGCGAGGGACCCTGATGAATTTAGTTACCATTCTATGTCTCTTACTTCCTC350.10630220197418376No Hit
ACGAGGGGGAGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGG350.10630220197418376No Hit
TACAGCCGGGTAGTCTTCTTGACTATGCCAGTTGTAGTACCAGCTTCTGTAT350.10630220197418376No Hit
TACTACCGGGACAAGTAGCTCTCATTCTTTAACCTTAAATAAAAATGTTAGC350.10630220197418376No Hit
AAAGCAGGGCAAGGAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGC350.10630220197418376No Hit
TCGTTGGGGAAACTAGTTATGACTGTTAACATGTTATTTCTCCCCATATTGA350.10630220197418376No Hit
CGTGCAGGGGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGCCCA350.10630220197418376No Hit
GTTTCAGGGAGGGAGCGGGCCCGGGCGGCGCGCGATCGAGGTCGGGTCGCCG350.10630220197418376No Hit
GGCGCAGGGAAACTACAGTTATTTTGTAGAACGTTTCTTAATTTGTCTTTGC350.10630220197418376No Hit
AGTCTAGGGGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAG350.10630220197418376No Hit
TGGTACAGGGCACTAGTCTAAGGGTGGAACAATTTCTTCTTGGTATAAGGTT340.10326499620349279No Hit
CTACCGGGGATTTCCAATGGTGGGAGTTAATTGCAACTAGTATAAACTCCCA340.10326499620349279No Hit
TATTTAGGGAGCCTCCAAGAAATATGGAACTATGTGAAAAGACCAAATCTAC340.10326499620349279No Hit
TGTCGAGGGATTGGAAGTAGTTACAACTCAAGGATTTTGGTAGAAAGGTATG340.10326499620349279No Hit
GTACAAACGGGATTATCAATAAGATAAAATAATGCATGTAGGTACCAACTGA340.10326499620349279No Hit
ATAGTTGGGTAGCTAAGTCCCTCTCTGTACAGTAGAGTGGCTGCTGTGTGTT340.10326499620349279No Hit
GAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTATCTC340.10326499620349279No Hit
GGCTATGGGCTGCTGCCCTTCCGCAAGCCGCTGATTATCTTCACACCTAAAT340.10326499620349279No Hit
GTTACAGGGCCGATCTATTGGGGGGGAGGCATTGAGGCAGCCAGCGCAGGGG330.10022779043280183No Hit
TTACTTGGGAATAGAGCAATTAGAGAACCCTTAAGTCCAAACTGAGTAACTG330.10022779043280183No Hit
CTTATACACATCTCCGAGCCCACGAGACACACAACTATCTCTGTCTCTTATA330.10022779043280183No Hit
TGTACAGGGCCCCGAGTGTGACTGGGAAGGAGAACTTATTCCTTACCAGGAA330.10022779043280183No Hit
TATGCCGGGTGCTGTTAGAAATAACTCTTGTGAGTTTTATATTGTGCTTTTT330.10022779043280183No Hit
GTTAAAGGGAGAGGTGTCTGCATTATTGGGCCGAATCCCTTCTGCTGTGGGC330.10022779043280183No Hit
AAACTGGGGGGCAGATAAAGATTATTCTGTGACCGCCAATTCTAAGATTGTA330.10022779043280183No Hit
TAGAAAGGGTGGAATAGTGCTGCTGCCAGCTTATTTTTCTGGTACTTGTATT330.10022779043280183No Hit
TAAGCGGGTCTTTTAGGCAATTTAAACTTTCTGAAATAGAGGAAAGTTGGAA330.10022779043280183No Hit
CACAACGGGATGCCTCATGAGAATAAAAGCTTTATGTGGAGTCCTATATCTA330.10022779043280183No Hit
ACCACGGGGGTTCACAGCTTGCTTGAAGAGAAAGGATGCTAGAATAAAGTAA330.10022779043280183No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACACACAACTATCTCGTATG330.10022779043280183No Hit
TGTCCAGGGTAAGTTTAGGGTAAATCTGGATGACCCTTTGCTTTCCACACTA330.10022779043280183No Hit
ATGTTTGGGAGTCAGATCTGCACTATAATTCCCACATCTGTGAATTCTTTTC330.10022779043280183No Hit
GCTCAGGGGGATCACAGCTCACTGCAGCCTTGACCTCCTGGGTTCAAGTGAT330.10022779043280183No Hit
AGCTAAGGGCGAAAATATAGATTCGAAATAAATAGGGGCTTATACAAAAAAG330.10022779043280183No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)