FastQCFastQC Report
Sat 31 Dec 2022
SRR5847763.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847763.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142114
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACAGTCCACCATCTCGTATGCCGTCT8500.5981113753746992No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACCATCTCGTATGC8060.5671503159435383No Hit
CTTATACACATCTCCGAGCCCACGAGACAGTCCACCACTGTCTCTTATACAC4020.28287149753015184No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACCACTGTCTCTTA3560.25050311721575635No Hit
GCCACCGGGTGGTTTTAAAAGAGGTAAATGTATCCATAGACCACAGTGCCTT1760.12384423772464359No Hit
AACATCGGGGATCTAACGCAGGGACTCAGCTCCCATCTCCTTTCAGAAAAAT1670.11751129375008795No Hit
GGTTCAGGGAAGTTCTTAGAGACAGACAAAGAAACTCAGACTCCCACACAAT1660.11680763330847066No Hit
CTTCGAGGGGAATAAATCAGAAACTGGTAAGATTTGTTGTATTTTCATAAAA1660.11680763330847066No Hit
ATCACGGGAGAAGTTTTCAAAAACAATATCTATTTTGCACAAGTGATTATGG1640.11540031242523607No Hit
AGCTACGATGGGGGTTTACAGGAAAGCTATCTGGTTTTATTTCCCTAATCCA1580.11117834977553231No Hit
AACGCTGGGAAGGGAGAGAATCCAAGCCTAAAATTAAATAAATCTTTCAGCC1570.11047468933391502No Hit
GATTCAGGGTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCG1570.11047468933391502No Hit
GTGCAGGGGATGGCAAAAATAGCCATTTTCCAAGTGGTGGCTGACTGTTGCA1570.11047468933391502No Hit
GTTCTTGGGACTGACACACTCGGGACTCCAGCCTCAAAAAGTGTGCAGATTA1530.10766004756744586No Hit
AAGGCTGGGATTACAGGCGTCAGCCACTGCACCTGGCTTTTCAATGGGTTTT1530.10766004756744586No Hit
ATCACGGGGAAGCTCTTTTGCCTTTTAGGCCAGACATAGCAAACGCTTTATA1510.10625272668421126No Hit
GTTACAGGGATACATTCAAAAGGTTTATTGTAGGCACAGGGTTAGTGATCAC1490.10484540580097668No Hit
AAAAGGGACCTCCAACGTGTGGGTTAGGCTGAGGCCTTTCCAGGATTCCTCC1480.10414174535935938No Hit
GCAGGCGGGTGAGAAGGCAGCTGGCCTGACCAGACAGTCCACTCCAGGCTAC1480.10414174535935938No Hit
CTGTCTAGAAACATGATATGGCCACGTCTTGGTGGTTCCTTATTTATGCGGT1480.10414174535935938No Hit
AAAAACGGGAACCTTCATAAGCCCTCAAATTGATCACATGTAGTAAATTGTT1470.1034380849177421No Hit
TACATATGGGCGGAGGGGTTTCCAGGTATATAAGCAGGTGTGCGCCTCCTGC1470.1034380849177421No Hit
ATAGACGGGTGAGCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAA1470.1034380849177421No Hit
TCATAAGGGGGCACAGTAAGGGAAGAAGGTGATGGATTTGTGGGAACAAGTA1450.10203076403450752No Hit
ATACTGGGTGAGGAGAAAGCCAAGGAGATTGCGAAGATGGCAGAGATGCTGG1450.10203076403450752No Hit
TAGCTTTGGGAGCTGTATTATACTCTTTTGTTAAATGTAGTATTGGTTCATT1450.10203076403450752No Hit
GTTTAAGGGGGGATAAGGGAATTAGTGGCTTTTAATATAACCACTGCTTCAG1450.10203076403450752No Hit
GTGTAAGGGATTTCAGCAACAACTGGAACAGCTCAACGCAATGGGGTTCTTA1440.10132710359289021No Hit
GAGTTGGGGATTATTTTTCATTCAGCATTTATGGAATATTCATCAAGTGTTA1440.10132710359289021No Hit
ACTATGGGGACGCTCTTCCGATCTTTATAAGGGGATGATATTTTTATTGAGG1440.10132710359289021No Hit
GACCATGGGATTGGAAGCCTGTCTTCTTACTATTAGTTTTGAGCTTAGTTTT1440.10132710359289021No Hit
AACGCTGGGTACAACGTGACCCTCTTCCACGTCATCCGCTCCGACGAGTTGT1430.10062344315127292No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)