FastQCFastQC Report
Sat 31 Dec 2022
SRR5847760.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847760.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88515
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACCATCTCGTATGC5720.6462181551149523No Hit
CTTATACACATCTCCGAGCCCACGAGACAGTCCACCATCTCGTATGCCGTCT5080.5739140258713212No Hit
CTTATACACATCTCCGAGCCCACGAGACAGTCCACCACTGTCTCTTATACAC3170.3581313901598599No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACCACTGTCTCTTA2890.32649833361577135No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACC1860.21013387561430266No Hit
AGTGGCGGGGAAAGAAAGTATCTGTCAACAGTGACTTCTGTGTCCAGTGAAA1310.14799751454555723No Hit
GGTTCCGGGAATCTTTGAGATACATCCTGTCATCAGTATATTTCAGAATACA1290.1457380105066938No Hit
TCTGCTGGGACCCAGCCTTGGGTATTCCATTATAGCAACAGAAAATGGACTA1280.14460825848726205No Hit
CTTAGAGGGCATAATGAATTCAAACAAATTCATGCCTATTAAAAGGAGGCTT1240.1400892504095351No Hit
TCTACTGGGGGGATCCAAATACATAAAATAGATATGTTTTACCAGTAAATTT1220.13782974637067164No Hit
CTTCAAGGAGAACTACAAACCACTGTACAAGGAAATCAGAGAGGACAGAAAC1190.13444049031237643No Hit
TCAGGGGTCCCTAAAATACTGCATGTGTGTGCATACATGCATTTTCCTGGGG1120.1265322261763543No Hit
GTTGCCGGGCTCTCCACCTTAGTACTTTAGACTAATTGTGTTTGTCCGTCCA1120.1265322261763543No Hit
GGTTGCGGGGTAATAGGAGCTGAATGATGACAATTTGGCTTTGTGTGCATTG1110.12540247415692257No Hit
TCAGTAGGGAGTGGGCCATTCATTTCTATAGGCAAAGAAAGCTCTAGACAGA1110.12540247415692257No Hit
TGTAGAGGGAGCCCTTTCTTCTAAATCAGAATGTTGTCTTTTCCACAGATGG1110.12540247415692257No Hit
CCAGCAGGGACTCTCAGATATCAAGATTTATTGTAAGGACAGAATAATTATG1100.12427272213749081No Hit
ATACGCGGGTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1100.12427272213749081No Hit
AGACTGGGGTATACCCACCAACAGAAGTTTAAGAGTTTTGATGATGTCATGA1100.12427272213749081No Hit
TTACTTGGGAGATATATTCTGAAGTTGTTTGATATAGTGTCCTAAAAGTATC1100.12427272213749081No Hit
GGTGCTGGGGCATGAACCCTGTGTGAATCAGACACTCACGGACGTTCTGTGT1090.12314297011805908No Hit
ACTGCAGGGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAAC1080.12201321809862736No Hit
TGGGTAGGGCGCCCCTCAACAGGCATGACTCTGCAGAGATGACTCAGCACTG1080.12201321809862736No Hit
TGTGGAGGTGAACAGTGACTTATTTTTATGTCAGGGTCATTAATTTTCATTG1080.12201321809862736No Hit
GTACATGGGATGATCATTTCAAATGATGCTAAAAAAGCATTCAACAAAATTT1080.12201321809862736No Hit
AAGACCGGGGGAAAAAGAACTGCAGCAGGAACTTCAAGAATATGAAGTGGTG1070.1208834660791956No Hit
AAAACTGGCATGGAATAAACCAGTAACTAATATTTCAGCTGTTGAAACAGAA1060.11975371405976389No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACCA1060.11975371405976389No Hit
AAGCTCGGGTATCTAAGTGTATCTAAACATAGAAAAGGAAATGCATTGTGCT1060.11975371405976389No Hit
ATTGCAGGGATGTGTGGTCTAGTTTTCTGATCTATACAATGGTTTCATGAGC1050.11862396204033215No Hit
ACATCAGGGAGCTGGGACCACTTGTGAAACGGCTAGTTGTGCCTAACAGACA1050.11862396204033215No Hit
TCTTAGGGGGACGCTCTTCCGATCTTATGAGGGGGCACCTCCTCACCATGGA1050.11862396204033215No Hit
GACTATGGGTTGTGATGAAAATGCAAAGGAGCCCGAAAATGCACTTGACAAG1050.11862396204033215No Hit
AAAATGGGGTTCTGAACGAATGAGCACACTTTAACCAGTTATTTACAGTTAC1050.11862396204033215No Hit
TACTTAGGGACTGGACCAAGAATGGAGTCCTGAACCAGTCTAGGCCAGTACA1040.11749421002090041No Hit
CTAGAGGGGTGGCACACACCTGTAGTCCCAGATACTCTGGAGGCTGAGTCAG1030.11636445800146868No Hit
GCACGGAGGGAATGAGTACCTGGATGAAACTACACTAGTGGTGGTGGAGATG1030.11636445800146868No Hit
AGAAGAGGGTGCCAGAAATTGTTTCAAGATCTTTACATGGATTATTTCATTT1020.11523470598203693No Hit
GCTAAAGGGGCTTTTCCGTGCTACCTGCAGAGGGGTCCATACGGCGTTGTTC1020.11523470598203693No Hit
GCAATCGGGGAAAAAGAATCAGTGCAAGAAACGCTGGCAATTCCAAAAGGCA1010.1141049539626052No Hit
CAGAAAGGGACTCACATACATATATGCATACACATGTGTGTGTGTGTGTGCA1010.1141049539626052No Hit
ATTGGTGGGACTACATCAATGGCAGTTTATTTTGTGAACATGATAGACCTAC1010.1141049539626052No Hit
ATTCGGGGGCCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGCAGTAACAT1010.1141049539626052No Hit
GTTGCAGGGCCACAAGAAAGACCTACAAAGACCACATGGGAGGAAAAAGAAA1000.11297520194317348No Hit
AATGCTGGGGAAGACGTCAGAGTCACAAATTTAGGATGATGGCATAGTGTTG990.11184544992374174No Hit
GGTTATGGGAAGGCTCTGACCTAGGCATGTAGTCAGGAAAATCTGTGGAAGA990.11184544992374174No Hit
TGGCGTTGGGCCGATCTTCTACTGGGTGCCAGACATTTATAGGTACTCAACT990.11184544992374174No Hit
GCTTCAGGGCTCTTAAAGGTACTACTACCTATCTAACAAAGCTTGAAGCCCC980.11071569790431No Hit
GTCGCAGGGGAGATGAGTCTCACCAACAGTGTGTAAGTCATTAACAGTCCTA970.10958594588487827No Hit
ACGCTCGGGTAGATAGGAATCGGCCATATGACGAAATGAGATCAATAGGAAA970.10958594588487827No Hit
TGCCACGGGCGGAAGCTCAGTGCTGTAGTCCAACTGTCCCTTGTGGGCACTG970.10958594588487827No Hit
GTCGGGGTAGTGTGCTTGATGGTGCTGTTGATAATAGCACCCTGCGCTCCTC960.10845619386544653No Hit
AACGCAGGGGCGCTGGCAGAGGCTGTGCTCCCTCCTCAGGTGGCCTCTGGCT960.10845619386544653No Hit
GACGATGGGTCAGGATTTTTCTTTTGACCTAATTTCCAGTCCACTACTTCAG960.10845619386544653No Hit
TTGCCTCGGGAGAATGTCTTGGTAGCACATGTAGGAGGCTGTACCTAATGAT960.10845619386544653No Hit
GCCCGCCTTGGCCTCCCAAGGTTCTGGGATTGAAGGTACGAGCCACCGCAAC960.10845619386544653No Hit
GTAACAGGGCATTCTCTCTCCATTTACTTCTGGTGGTTACCCTGACTCTTGA960.10845619386544653No Hit
GTAGTGGGGAATGTATCCATGCATTTGGATACTTCTGAAAATAATGACTAGA950.10732644184601481No Hit
CTACTGGGGGAAGTGACTCTTTCCAAGATGATATTAACCCAGAAAGTTTAGG940.10619668982658305No Hit
ATCTAAGGGATAATTCAAATTACTTTTAGTTGTTTTATTTATAACTGTATTC940.10619668982658305No Hit
CGCTACGGGGGCTAACTGAAATGATGGCGACTGGAACGCCAGAGTCTCAAGC940.10619668982658305No Hit
AGGTGCGGTGGCTAGTAATTACTGCCATTATTGTCTGTGATACAGCAGTGTT940.10619668982658305No Hit
TTGCGCGGGAGTCTTTAACTTTTGAGGAACTCTGTAACTGAAGACAAACAAT930.10506693780715133No Hit
AGTCTAGGGCAAAGAAATATTTATACATCAGCAGAACTATAAATTCAAAAAT930.10506693780715133No Hit
TTGTTAGGGAGCTTTATCAGTGTATACGATCATGTTAATGAACTGATTTGTT930.10506693780715133No Hit
TGTTTAGGGTCAGTTTCCGCATCTACAAGTCTGTTTTACAAGCAGTGCAGAA930.10506693780715133No Hit
TATTAAGGGCTGGTTACTGTGATCCCACTACTGAGGAAGTTCATTCCAGGAA930.10506693780715133No Hit
GAAGAGGGCAATTTAGGAATGCTCAATGTGCTGTTGATTCTTTCAATCCACA930.10506693780715133No Hit
ATAATAGGGAGAGAAGCAGTCAGAGATGAGAGGATGGCAGCTAGCTGAAAGA930.10506693780715133No Hit
CTTTTAGGGCAGGTGATACGCTAAGGCGTTTGGACTTTATTCTAATCATCAA920.1039371857877196No Hit
TGACAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATA920.1039371857877196No Hit
ATTAAAGGGTAATAGTCATGTATTTCAAAATTTGGCTTAATTTAGGAGAATC920.1039371857877196No Hit
ACAGGCGGGGGGATCTGCGGCCGCACCGGCAGTGGGAAGTCCTCCTTCTCTC910.10280743376828785No Hit
GCGTAGGGAGATAGGGAAACAGAGAAGCTCACCTGGAGGACAAGAGTTGCTT910.10280743376828785No Hit
TCTTTCGGGTGACTACAGACACTTGCAAGCTTTCCTTTTACTTTCCTGTGAT910.10280743376828785No Hit
TTGCAGGGATAGCGGCCGCGGGCGGCGGCGGCAGCGGTTGGAGGTTGTAGGA910.10280743376828785No Hit
CGCAGGGGGTCAGTGTGAGAATACTTTTTACCCTAGGACACACAGTTCCCTT910.10280743376828785No Hit
TGTGTAGGGGGCACACATCCAAGCAGTGTGATAAGTTCTGTCCATTCTACAT910.10280743376828785No Hit
TACAGGGGGAGTTCAACTGCTTTAATTTTTAACCTGTAGCATTTGGATAATG900.10167768174885612No Hit
CGAACAGGGATTGAATACCTGTGTAAAAAGCACGTATTTGTAGTTTGTGTTT900.10167768174885612No Hit
GAACTGGGGGAGACGTTCTTCGCCGAGAGTCGTCGGGGTTTCCTGCTTCAAC900.10167768174885612No Hit
CGGTCTGGGAAAGGAAGAAGAGTCCACCTTGCGACCGTATCCGCTAGCGCGG900.10167768174885612No Hit
TCACTTGGGAAAGGAAAAATCCTCATTTTGCAGGCAGAATAAGCCGGGATAC900.10167768174885612No Hit
TTGTATGGGGCAGTCCAGTCTGGATATAATGAAAATGCCCTAGCAGCTTCCC900.10167768174885612No Hit
GTCACGAGGGTGAATCTACAGAAACAATTTAGCACACTGGTCGAGTCAACAG900.10167768174885612No Hit
CTCTCAGGGATTAGTAACTGTGCTGTTCATTATTTTTAGTAACAGCACATAG900.10167768174885612No Hit
TCCTCAGGGCCATGTCTCCATGCCTCAGATCTCATCTAAATCTTTGAACAGC900.10167768174885612No Hit
GGACATGGGGAAAATTGACGTTAAAGAAGTTTCTCCATTGTCTTACTAACAA900.10167768174885612No Hit
CTAACAGGGAACTAATGATGATACAGAGAATCATGCAAACAGATCATTAACA890.1005479297294244No Hit
TTACTGGGGGAGAATAATTATTTGATTGCTAGATGCAGCTTAACACCTACTG890.1005479297294244No Hit
CTTACAGGGCAATTGTTTCCTTAATAGATTGTGGTTTTGGTGTGATATCTGT890.1005479297294244No Hit
ATGGATGGGACAGGATGCCAGCCTGAAGCCAAAAGTAGAATGTAGTGTGGTG890.1005479297294244No Hit
TATTAAGGGGATCTTGCCAAGGGTGCCCAATTCACTCCAATAAGATAAACTT890.1005479297294244No Hit
TAGTCTGGGGTTAAACTTGCATTTCCATTGCTCAAATTCTAGAAGAACCTGT890.1005479297294244No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)