FastQCFastQC Report
Sat 31 Dec 2022
SRR5847712.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847712.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97913
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACCATCTCGTATGC8410.8589257810505244No Hit
CTTATACACATCTCCGAGCCCACGAGACAGTCCACCATCTCGTATGCCGTCT7810.7976468906069675No Hit
CTTATACACATCTCCGAGCCCACGAGACAGTCCACCACTGTCTCTTATACAC4580.4677621970524854No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACCACTGTCTCTTA3420.3492896755282751No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACC1810.18485798617139704No Hit
AAGAACGGGCGATCTGGAGTAGGGTGGTGTAGATACTGGTGTGGTTTCTACT1260.1286856699314698No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACCA990.10111016923186911No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)