FastQCFastQC Report
Sat 31 Dec 2022
SRR5847705.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847705.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75087
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACCATCTCGTATGC7821.0414585747199916No Hit
CTTATACACATCTCCGAGCCCACGAGACAGTCCACCATCTCGTATGCCGTCT7450.9921824017473064No Hit
CTTATACACATCTCCGAGCCCACGAGACAGTCCACCACTGTCTCTTATACAC3560.47411669130475315No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACCACTGTCTCTTA2840.37822792227682556No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACC1690.2250722495238856No Hit
ATGCTGGGGCAGGAGAGTTGCTTGAGCTCGGGGGGCGGAGGTTGCGTTGAGC1530.20376363418434618No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACAGTCCACCA1330.1771278650099218No Hit
AACTTAGGGCTCCGCCCTTGGCTGAGACTGGCGCTCCTCGCCGCTTCCGGCG1310.17446428809247938No Hit
CAACCAGGGACTGAGAAGGGCCTGGTAACTGTGACATCCCAATAAATCTGAA1270.16913713425759452No Hit
TCGCCTGGGTGCTCAAGGTCAGTGTCATCTTTGTGTTTAGCTCATCCAAAGG1260.1678053457988733No Hit
AAGCTAGGGAATTAAGTTTGTCATCTTCTATGGGCACAGTTAATGGCACTCC1220.16247819196398844No Hit
TCTCATGGGGATCTTTTCAAGTTTTTGTCTCATGGTATTTTTTCCTCAATGC1210.16114640350526724No Hit
GCACGAGGGCTTAGCTCGGGCTCTAACAATTTCTACAGATCAGGAATTCAAG1170.15581924967038235No Hit
CCTCTTGGGTGAGAAATAGTGTTTGCCCTAAACCTTTGGGAAAAAAATACAG1160.15448746121166115No Hit
GAAGGGCGATCTATGTCGGGAAGACAAGTTTCCCAACAGCTAGGCTAAGAAC1110.14782851891805504No Hit
TGTTTTGGGATGGGACACAGCAAAAGCAGTACTGAGGGAATTTTATAGCTAT1110.14782851891805504No Hit
CCTAAGGGGTAATCGCTTGAAGAACTTAAACCTTCTGGATGAATGATTTCTA1090.1451649420006126No Hit
GCTCCAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1080.1438331535418914No Hit
ACTTTGGGGGTGTTATATTTACAAGTATTTTGAATTCCCTGTTACACATTTT1070.14250136508317018No Hit
CACAAATGGCTGCCAAACTGGAACGTTTGCGAGAGAAGGATAAGCACATTGA1060.14116957662444896No Hit
GTTTTAGGGTCTTGAGGTGGGTACTAACAGACCGCAACCTCAACACCACCTT1050.13983778816572776No Hit
GGATAAGGGAGGTCCAACGCATAGTCACTGTTTTCACTAACAAATACTCTAA1050.13983778816572776No Hit
GCAACTGGGCTACAACACAAAAGGCAAAAAATTCTGCTTGTTTTCATTGAAG1030.1371742112482853No Hit
GCAGAAGGGGTGCTGATCTGGACCATCTTTGTCTTGCCTTTTCACGGTAGTG1000.13317884587212167No Hit
TCGCATGGGAAGGCTTATATAAAGATCTATCAAGGTGAAGAATTACCACATC990.13184705741340047No Hit
TACGCTGGGTCCAATCCCCAATCTTCCTCCCTTGGATTTTCCATCTCCAGAA990.13184705741340047No Hit
ATCTTAGGGGAGGGACACCCCAGGGACCCATCAGACTCACGACACAGAGAAA970.12918348049595801No Hit
CTCACGGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC970.12918348049595801No Hit
TCAACAGGGGGCTGTAGTGGCTTCGTCTTCGGTTTTTCTCTTCCTTCGCTAA960.1278516920372368No Hit
ACGCATGGGCGCTCACCGCATCGTGGCACCTGGCAAGGGCATCCTGGCTGCA960.1278516920372368No Hit
TGAACTGGGGTGAACAGCCGTTAAAATCCCAGTTGATTTCTGCAGTTACGGG960.1278516920372368No Hit
TTAAAAGGGGTACCCTCTGCCTCTACAGTATTATGACATTTCCTAATAAAAC950.12651990357851559No Hit
CTGGCAGGGCTACTCTATGAAATTTGCTTTCTTGGTAACCTAATATATGATC940.12518811511979439No Hit
TAATTGGGGAGAGCAATCAACAGAAATGTACAGGCATGACTAAACTTTGGCT940.12518811511979439No Hit
AACCGCGGGCATAACATCCACAGGACTCTATGTTTGCAAAAGCCAGCTTAGC930.12385632666107316No Hit
ACGCCGGATTTAAAACAGTATGGAAATACGTAATGTGTGAAGTGAAAATGCA930.12385632666107316No Hit
TTTTCAGGGCATCTCTCTCATGAACTGTATTCATTTTCAAAAAAATTGATTT930.12385632666107316No Hit
ACCGTAGGGAAATAATTGATACTTGTCTACGTAATACATTTTACTGTATGTT920.12252453820235194No Hit
GACAAGGGGTTGATGGAGCAGGTAAACTAGCAGCTAATGCAATAAAAATAGA900.1198609612849095No Hit
ACATATGGGCTTGTCTAGGTGTGAGATGATCTAGTTTTTCTTTGCAAGAATG900.1198609612849095No Hit
TTAAGTGGGGGTGGAGATTTGCTGTGTGTCAAGCACAATTTTATTTACAACA900.1198609612849095No Hit
TAAACAGGGAAGTAACATGAAAACATTCTCCTCCGCATAAGCCTGCGTCAGA900.1198609612849095No Hit
AGGTTGGGGCATCAGCTTGTCTGCAGGGGATTTCTGGAGGTTTGGGGGCTTG900.1198609612849095No Hit
TTAAGCGGGGGTTTTAATTCTTGGGACTCGGCTAGTATCTCTTAATAGCTTC900.1198609612849095No Hit
ACCTAGGGGACGGGATAGCATTCATGAAGTGAATGGAAAGTTGGAAAGTCTC890.11852917282618829No Hit
AAAAAAGGGCCTTTGAAGGATGCCCTGTGTAGATTATTCAGTGCCACAAATT890.11852917282618829No Hit
TTAGTGGGGGCTTGTACATGAACCTTTGTATAAAAAACACCAGTGCTCTTTC890.11852917282618829No Hit
GCTTCTGGGATTGACTATGCCACTTATGTTATCATTGCTTTGCCTGAGTTAT880.11719738436746707No Hit
TGTAAATGGGAAGGCTGTGATCTTCTTCATACCAAACCCAAGTCTTATTTTT880.11719738436746707No Hit
TTAAATGGGCACCAGCACTGGGTTTTTGTTTTTTGTTTGTTTTTCCGCTTAA880.11719738436746707No Hit
GAATAAGGGGAACACTAGCGGTTGCCGCAGGATCTGTGAACTTTGCAATGTG880.11719738436746707No Hit
GTGTAAGGGGTTTGCTGGCAATTTCCCTGATATGAACAAACTCATACAAAGC870.11586559590874584No Hit
GTACAAGGGTCCGATCTGAGGCAGGGGATTTCTTGAACCCAGAAGGCGGAGG870.11586559590874584No Hit
CGTACAGGAACTCAGGATTAAGAAACTCACTCAAATCCACACAACTACATGG870.11586559590874584No Hit
GATATCGGGGAAGTGGCCCTTGCAGGCAAGAGTGCTGGAGGGCGGCAGCGGC870.11586559590874584No Hit
TGAAAGGGGACCGGAAAAATCATTGATGTATTTGTGATCCTTAATAATGACT870.11586559590874584No Hit
CAAACCGGGTACCTCGTGGGCAGATGATAACATGTTTTGGATGCTGTCAGTG870.11586559590874584No Hit
AACGGTGGGTGAGATTTGATGGAGCCCTGAATGTTGACCTGACAGAATTCCA870.11586559590874584No Hit
GCTAGAGGGCATTTATTTCTTTACATTTTGATTTCAATGGAAAGCAATACCA860.11453380745002463No Hit
CTGATAGGGCTGTTGAATTGCCCCTGGGCCTGCCCCCGGCCCCATTTGTGCC860.11453380745002463No Hit
AATTATGGGTACAAAGCTGGCTGCTGTCCTGACCAAGCAAGTTCTCTTATCA860.11453380745002463No Hit
GTGCCTGGGACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCT860.11453380745002463No Hit
AGCGCAGGGCTATACAAATACAGAAAACAGAATAAATAAATAATTTCATTAA850.11320201899130342No Hit
TACTTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC850.11320201899130342No Hit
TTACTTGGGCATGCCAAAAACAACTCCTGCTATCTCAGAATTAATTATCTTT850.11320201899130342No Hit
GTGCTGGGATTACAGGTGTGAGCCACCATGCCTGGGCTAAACTCTTTAAGTC850.11320201899130342No Hit
TTGACCGGGAGTAATTATAATATGTAAGCTATTTGTTATGTCTACAAAGCAT850.11320201899130342No Hit
GGCGGTGGGGGCGGAAGGCTGGGAGGGCTGCGCGGGCTGCGCGTCGCCATGG850.11320201899130342No Hit
TAGCAAGGGGGCAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGT850.11320201899130342No Hit
TGCAGTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC840.1118702305325822No Hit
AGACAAGGGACATCTACCACACCCTGGGCTGTTTGTCAAACATGCCTGGTTT840.1118702305325822No Hit
TTTACAGGGGACAAAACACATAGCCTACCCCTTCCTTGTACTATCCCTATGA840.1118702305325822No Hit
TTAATCGGGCTAGCTGCTGGCATCACTATACTACTAACAGACCGCAACCTCA840.1118702305325822No Hit
GGTTATGGGCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTT840.1118702305325822No Hit
GATGTGGGTCTGTGGGGGTGATGAATGCTGGTCAAGGGGCCAAGGTGGAAAA840.1118702305325822No Hit
AGTCAGGGGCACCAATCACATGCCTATCATATAGTAAAACCCAGCCCATGAC830.11053844207386099No Hit
TTTGCGGGGATTGTGATTTTGTCTTCCTTAAAGATTGGAATATGAATAAAAA830.11053844207386099No Hit
AGCCATGGATGTGCATCAAGATTCCCTCCTCCCTTTTGGAATTACCAATAGA830.11053844207386099No Hit
CTGTGAGGGCATAAGGAACCATGCTGTAACCTATGGTAGCAGCAGCTGGGCT830.11053844207386099No Hit
TGCTCTGGGTATTCCAAATAAAACTTGTATCTTCAGGCTTATGTTACTTGTG830.11053844207386099No Hit
GCCTCCAGCACATGCACTAAAATTTAAACTCCATGCCTGGACAAAATCAATG830.11053844207386099No Hit
AGTGCTGGGATTACAGGTGTGAGCCATCGCATCTGGCCTACATTTCTATATC830.11053844207386099No Hit
GCGTTTGGGGAGGGAGGAGTGGGGCCACAGAGAGAGGGCCCATTAGTTGCAG830.11053844207386099No Hit
GAAGGCGGGATGTATATAAACCAACATATGTACACACATTTGTGTTTTTAAA830.11053844207386099No Hit
CTTACAGAGGGGTGCAACATACAGGTAGGTCTTCAGCATAAGCTGAAATATA820.10920665361513976No Hit
TACAGTGGGGGGATTACAGGTGTGAGCCACCATGCCTGGGCTAAACTCTTTA820.10920665361513976No Hit
TGTTGGGGACCCAAAGAAAAAATACACAAGATTTGAAAAAATTGGTCAAGGC820.10920665361513976No Hit
AGACATGGGAGATGGAAAAATTCTCAAGAAAAATAGTATTTTGTAGTAATTA820.10920665361513976No Hit
AGTAAAGGGGAAATCACAAAAGAGCATAGCGGTTATATCAGACCAAATAGAT820.10920665361513976No Hit
CGGCCTCCCAAAAAGTGCTAGGATTACAGGCATGAGCTGCCGTGCCTGGCCG820.10920665361513976No Hit
GGCTCTGGGGTGGTTTTGATTTGCATTTCTCTGATGGGTCTATTTCTTTAAA810.10787486515641855No Hit
TTTCAAGGGAGTTTCAGTCTTTCAAAGCCAGCCAGGCTACACACAGAAAATG810.10787486515641855No Hit
AAGCCTGGGTCCCCAAAGATTTCTTTACCAGTTGTTTTTAACTATGAATCTT810.10787486515641855No Hit
TTCACGGGAGGCCCCTGAGGAGCGATGACGGAATATAAGCTGGTGGTGGTGG800.10654307669769733No Hit
TATGAGGGGGGCGCAGGCGCAAGCCGGCAAGATGGCGGCGGCTGGGGCTGGC800.10654307669769733No Hit
CGCAACGGGGAAGGCCAAGCTGCGCCCCCGGAATCGCTCAGCTGAGGAGGGA800.10654307669769733No Hit
GTAGTAGGGATGCTGCTGGCGTCTAAGTGTTTGGGAAGCAACAAAGAGCGAG800.10654307669769733No Hit
ACGCTTGGGCAGCAGATGAAAAGGAAGTAAGCCAAGAGAAGGAAACAGACTT800.10654307669769733No Hit
GCGCAAAGGGTCTGATTCTTATAGCACAGTGCATTTTCCAGAATACTTTTTA790.10521128823897613No Hit
TACTTGGGGGTTCCTTAATTAGGGACCCGTATGAATGGCTCCACGAGGGTTC790.10521128823897613No Hit
ATCGTGGGGGAATGTATTAAAATTCTCTACTTCCTTGTTACATGGTCTTTCC790.10521128823897613No Hit
TGCTTAGGGGATATCATTGATGAACTTGACAAGAGCAGTTTCTATGGAGAGC790.10521128823897613No Hit
TTGCTTGGGTACCTGTGCCAGAGAGCTAGAAAGAAGGTCATAAAGGGTTAAA790.10521128823897613No Hit
GCATCAGGGAGGAGCTCAGGAGCAGAAGCACCTGCCTGCAGCCCTGCAGCTA780.10387949978025492No Hit
ATCTGTGGGTCGACATCTTCAAGCCAGTGCGCAAGCACTTTGATATGCCTCA780.10387949978025492No Hit
ATGCTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC780.10387949978025492No Hit
CAAGCAGGAATTAAAGTTGGATAGAGAAACAGACACATGTGATGAAGCAAAT780.10387949978025492No Hit
TAGTCAGGGTACTTAATTACATCTACTTTTTTATCTTGAACAATTAATTTTT780.10387949978025492No Hit
ATAAGCGGGATGGGCAAAGCACTTAACATGTCTGCTATGGTTTGAATGTGTC780.10387949978025492No Hit
GTTTGAGGGAGAAGCTCTCCGGGCCCTCAGGGGCTTAGATCCCACTTGAGTC770.1025477113215337No Hit
TTGCCTGGGTGCCACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGACA770.1025477113215337No Hit
GCACCAGGGGATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGC770.1025477113215337No Hit
CCGTCAGGGGGTGCTGAGCCAAGGTGGATGATGTCGAGGTCTCTGAAGGCAA770.1025477113215337No Hit
AAAATGGGGAGTCCAGCATGGTTTTGATGTAACCATCCATGCTTTTATTTTT770.1025477113215337No Hit
ATTATAGGGACCCTACAATGTCCTTGATTCATCTAAATAGTATTAAACCTTC770.1025477113215337No Hit
AACACGGGTGCCTCAGCAAGTTTTACTTCAATATTAATGGGCAAGATGAATA770.1025477113215337No Hit
CGAACCGGGATGAAATGAAATAATGAAATGATATGAAATAATGAAATTGAAA770.1025477113215337No Hit
CCGGTGGGGGCCTTTGACTTGATCTTTTTCCATTCTCTTAAATGTAGTCAAT760.10121592286281247No Hit
CCAGGGGGAGGCGGGTGGATTAATTATTCAGCATCCTCTCCCTTTGTAACTA760.10121592286281247No Hit
TTGCTCGGGAGGCCGAAGTGGCTAACCAAGAAACTAAAGAAGACTTACCTGC760.10121592286281247No Hit
TATACTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA760.10121592286281247No Hit
AAAGCGGGGCGATCTGATGTCGGGGATCTCTCGTGGGGGCACATCTGAAAGA760.10121592286281247No Hit
GCCACTGGGTGATAGGAAAATCATGTTTATCTTTTCAAAAATATCTTACCCA760.10121592286281247No Hit
ATTGCCAGGGGTCAGGACTTGTTCATTAGGTTGGCAGCAGAGGGGCAGAAGG760.10121592286281247No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)