FastQCFastQC Report
Sat 31 Dec 2022
SRR5847676.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847676.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65499
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTCGGGTGAATCTCGTATGCCGTCT10151.549641979266859No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGGTGAATCTCGTATGC8971.3694865570466725No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGGTGA1910.2916075054580986No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGGTGAA1350.2061100169468236No Hit
CTAGCTGGGCGGGAATCTTACTGTTCAGGAGCTGTTCCTAGAACTAACTCCC1250.19084260828409594No Hit
CACCAGGGGCAAGCTAACCAATATTTTAATTACAGATCATTAAGCAGCTTCG1150.17557519962136825No Hit
GTCCATGGGGTGGAAAAAAAACATGGGAAGGAAAGGTAGGAAGAGAAAGCTT1050.1603077909586406No Hit
TCTATTGGGCAAGCAGCGAGATTGTGCGAACCATGCTCCGAATGAGTGAGAT1050.1603077909586406No Hit
GATGGGGGGGCCCGGTAATCGCATAAAACTTAAAACTTTACAGTCAGAGGTT1050.1603077909586406No Hit
ACAGTTGGGCGCCGGGGGAGGTTGTGGGCAACGGTGGAGGAGGAGAGACGGG1030.15725430922609507No Hit
GGCAAAGGGCTCCTTGTTTTAGGCAAAGGCAGACCCACTATTCCCGATATTT1030.15725430922609507No Hit
CAGAATGGGGCAAGACACACAGCAGGTTGTTCAGACACGGCTTCGCCCTAAT1010.15420082749354952No Hit
GCCGTAGGGGCTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAA1000.15267408662727674No Hit
TCCATTGGGATATGCCATCCGCGAGGCAGCCACCAGCAACCTGAAGAAGCTA970.14809386402845845No Hit
CTTTCGGGGACCTCCAGCAATGGACGCAGAAGAATTGAAGATCTATGAAATG970.14809386402845845No Hit
AAATTAGGGAGCCACCTTGGTGACATAACAGAAACAAAATCATGTTGGTTAC960.14656712316218568No Hit
GCGTAAGGGCCGATCTCTTTAAGGGACCTGTGAGAGACCATCTAGCAGATTA940.14351364142964015No Hit
GTCAATGGGATTGTGGTATATCCATACCACAAAATACAACCCAGTAACAAAA940.14351364142964015No Hit
GATGACGGGTAATAAATGAAAGAGTCAGATGTTGTGATATTTCTTTATTTCA940.14351364142964015No Hit
CTCAGTGGGGCAGCGGGGGTGGCGGAGGAGGCCTCATGGAGGAAATGAACAA930.14198690056336738No Hit
AGGCATGGGCACACTGCATTCGACTTGTTATTCTTTTGTGGCTTTGTTTTCT930.14198690056336738No Hit
CAACAAAGGGTCGAGGGTTTGAGGCTTAAACAAGCCAACATATGAATATATG920.1404601596970946No Hit
TTAATAGGGAAACTGGAGGTTGACATCCCTTTGGTGAAATCCTATTTAGCAC920.1404601596970946No Hit
AGACGTGGGGTATAAAAATGGACATTAAATCATGGCCTTGCATTAAAATATG900.13740667796454908No Hit
AAAATAGGGGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGTGGCATC890.1358799370982763No Hit
ATGAATGGGGAATCACTGTTCTCTACAGCTTAGTTCAAGGACAGCAGTTGAA890.1358799370982763No Hit
TTAGTAGGGAACAGGAGATAATGTTTGTGACATTGAGTTAGGCAAGTTTTTA890.1358799370982763No Hit
GAATTGGGGGTGTCGACTCGTGGCTTATGAATAAAGGCAGGCAAAGTTTGCA870.13282645536573076No Hit
AGCTAGGGGAAGTGAGAATGCAGTGGAACAATATCCTCAAAGCATGAAATTA870.13282645536573076No Hit
AGCAATGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC850.12977297363318524No Hit
TCACAGGGGGCTAAGAGATTGGTCATATAATACAGACTTACAAGAGAGGCTA850.12977297363318524No Hit
TAAGCAGGGATGGAAGACTTCACACTGGCGAGAAGCCCTATGAATGTAAGGA850.12977297363318524No Hit
CACGATGGGTCAGGAAAAAAGGAAGATTGAACTAATAAAATTTTATTTCTTA850.12977297363318524No Hit
TTGATTGGGACATACAGTTTTATAATACTTCTCAAATGCAGATGGTCATGGA850.12977297363318524No Hit
GGTACGGGGAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCAAAATAGT840.12824623276691247No Hit
CACAATGGGAGATCACTGCAGCTTCCACCTCCTGGGCTCAAGTGATCCTTCC840.12824623276691247No Hit
TACCGCGGGCGAGTATGAGCCACACAAAAAATTACAGTGAGAAAATGAGGAA830.1267194919006397No Hit
TTGCGAGGGCAGCCAAGACGGGGCCCCAACTCCTGGGCCCCCTAAGCCAGGC820.12519275103436694No Hit
AAGCACGGGGTGGATCTCTAGCCCAGCTACAGCAGAATACATTTTACCAGCA810.12366601016809417No Hit
TAGCAGGGGGGTCATCTAAAGCTGTCAAATAAGACATTCTGTGAAAGGTAAA800.1221392693018214No Hit
CGTGCAGGGAGGAGTTCCTAAGTGAGCTGCAGAGGAAGGAGGAAGAGATGAG800.1221392693018214No Hit
GCTTGCGGGCAAAAAGAAACTATCATATGCGGTATACAAAGTATGACTAAGA800.1221392693018214No Hit
TTGCTGGGGATATTGAGCTGTAAAATATGAATAAAATAGAACCAATTTATGG800.1221392693018214No Hit
TATCTTGGGGAAAGGGTTCTAGGATCTCACACAAAAAGAATTCGAGGTGAAT790.12061252843554864No Hit
AATAGCGGGATCGGAGTCAGCCAGGAGCTGTCACCAAGGAAACGCTACCTCT790.12061252843554864No Hit
TATGTAGGGTAACTGTAAGTAGGAGAAGACATCTGAAATTTAACTATGATCA780.11908578756927586No Hit
CTCAAGGGTCCATGTGTTTCCTTTGTAAACCCTCCCTTTTCTAGTTGCCAAT780.11908578756927586No Hit
AATTAGGGAAATGATGAAATGATAAGATGAAAAGAGTTGATGAGATGATGAG780.11908578756927586No Hit
CTACAGGGACAGGCTCAAATTTACGTTTTTAAAGGAAGAATCTATGCAGCTG780.11908578756927586No Hit
ATTGCTGGGGGGGCGGGGTTCCGGTGGGCGCGCGTTGAGGCTGCGGTCATGG780.11908578756927586No Hit
TATTAGGGAACATATCGTCTGTTTTAATACGATTTTCTTTTTGAGTACTTGA780.11908578756927586No Hit
TAAGCTGGGACTGTCTTTCTGAAGGACGATTTCTTAATTCTTACCGAGAGCT780.11908578756927586No Hit
TGCGTGGGGCGGAGTCGGCATACCTGGCTTCCCCTCGAGGACCTCCCCTCAA780.11908578756927586No Hit
TCGTCAGGGTATCTTTGGAAACAGATTATTAGAGTAGTGGTTGACTGGGAAA780.11908578756927586No Hit
ATCTGAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGGTGAAT770.1175590467030031No Hit
TCTCATGGGGGGGTGTACGCGGTGCTTCAGAGGATGGGAACTACAATTCCCA770.1175590467030031No Hit
TCAGCGGGATGTGAGACCAAATTGCGTGTACTATAGCTGGGAGAACTTTTTG770.1175590467030031No Hit
AGTTCCGGGACCACACAATAGCAAGCTTAAGAAAGTTGGTGATGGTTTCTAA760.11603230583673034No Hit
GCTTTTGGGCTGGAAACAATAACATGTCTCTAAGCATTGTTTCTTGTGTTGT760.11603230583673034No Hit
TCTGGTGGGAGACTCTGTGGATGGATCCGTGTTTGAGTTACAGAGCCTATTC760.11603230583673034No Hit
CAAAACGGGATCTCCTGACCTTGTGATCCGCCCGTCTCAGCCTCCCAAAGTG760.11603230583673034No Hit
GCCTAAGGGGTGCAGTGTGACTGGCAGCAGAAAGGGGGCATCTACTGGTTTA760.11603230583673034No Hit
TGGCAGGGGGAAGTTCTTCTTTATGTAAATGTGTTCTATGGGAGGGACAAGA760.11603230583673034No Hit
AAACGAGGGGATCTGCTCCTGGGAGCTGAGTGAGTGACTGTGGGAAATTTTT750.11450556497045755No Hit
AAATAGGGTGAATGCTGTGTGCTTCCTGCCTCTGTGCCTGGCCTGTGTGCAG750.11450556497045755No Hit
AATTGCGGGAGGAGTGCCTGAAGCCAATAGCAGGGAACTAGAGCAGACTTGG750.11450556497045755No Hit
AATGATGGGCAAATGGTCATTTAGTGGCATATGGGAGAGACGATAACCAGCA750.11450556497045755No Hit
TGCTTAGGGTTGATATTTTAGTTATTAATTCATATTAACTTTGGCTGAAACT740.1129788241041848No Hit
CTCATCGGGCATGACGCGTTTATACTAGTCTTGATTAACAAGTCATGACTTT740.1129788241041848No Hit
GATCAAGGGAAGAATGAAAATTTCCATTTTAGACATGTTAATAATAAATCAG740.1129788241041848No Hit
AACTAGGGGCAAGGCTCTTTCTTTGTACAGTCAGTCCAGAAGAGTCTCGGAA740.1129788241041848No Hit
CCAGCCGGGCTGTGTAAATCCTAATTATGTGACCATTCTTTCTTAACCTCAG740.1129788241041848No Hit
GGGGCGGGAGAATCGCTTGCATCCGGGAGGTGGAGGTTGCAGTGAGCCGAGA740.1129788241041848No Hit
CGCAGGGTCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAG730.11145208323791202No Hit
AGTCAGGGGATGGTGTTGTATATTATAAACTGGTGACATTCTACTATTGAAT730.11145208323791202No Hit
GAGCTTGGGAAGGGACTTCTTTTTTAGAAATGCATTAAAAATAGTAAGCCTT730.11145208323791202No Hit
GTAGTTGGGCTCTCACTGTAGATTTGCTGTGCCTGTTCATGAATGGAATCAT730.11145208323791202No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGGTGAAACTCGTATGC730.11145208323791202No Hit
GTACTGGGGGATCTGCGTGTGGGATTTCAATATTTTCAATCCCTGTTTTACT720.10992534237163926No Hit
GCCAGGGGCAGGTAAACTAAGTATATGTTTATTATTGGTGTATTTAATAAGA720.10992534237163926No Hit
TGAACTGGGCATATGCAATGCTATTGAGCCATTGTCCCCTCTTAGATTTTGT720.10992534237163926No Hit
ATGCTCTGGGTCATGGGACTCATCCCAGGCCTTCGCAGATTATGTTAGCACC720.10992534237163926No Hit
TCAGTGGGGTTGGGGTTAGATGTTGGGCAGGTTTTATCCTAGACTAATACAT720.10992534237163926No Hit
GGTAACGGGCAGATTAAAATTAATTTCATGTGTATATGGTGGAAATTTGTGG720.10992534237163926No Hit
TGCTAGGGGAGACTAATAAGAAAAGAGAGAAGAATCAAGTAGATGCAATCAA720.10992534237163926No Hit
AGCTAAGGGAAGCCTGACAAACCTTACAAAAATTGCATGATAGCATTTGGCT720.10992534237163926No Hit
CTTATACACATCTCCGAGCCCACGAGACTCGGGTGAATCCTGTCTCTTATAC710.1083986015053665No Hit
ACGCTTGGGGGCCTGGAGTTCAAATGATCTGTTCTTCTTTTAGTGCTGGTGG710.1083986015053665No Hit
AAACTAGGGACCATAAGGGGAAAGTTAATATTAGCTTTTGTTTGTAAACTAT710.1083986015053665No Hit
TAGGCAGGGCAACATGAAATTTTTATGTCTGTTGATCTGTTTTCTGACAGTC710.1083986015053665No Hit
AACGCAGGGATGCCATAGTTAATATGTATGGCATTGAGGCTGCGCTGTGGGT710.1083986015053665No Hit
GTGCCAGGGATCCTGGTCTCCCACACTACTCATCCATCCATTCATTGTATTC710.1083986015053665No Hit
ATTTATGGGGATTTGGAAGTTAGCTATGGTGATACTTAGCATACAAAAATGA710.1083986015053665No Hit
GCATTGGGGATGGTTTTACCCTCCACAAATGATCCTTATGGAATCAGTTATT700.10687186063909372No Hit
ACACTTGGGATAGAATAACAATATTAAAACATAAATTTTTCCTTGTATGTTG700.10687186063909372No Hit
TCTGAAGGGGACTTTATGGAAAGAAGAAAAGCAACTTTCCTTTTTTGTACAG700.10687186063909372No Hit
ACAGTGGGGATTCATTCAAGAGGCAAGACTGTCTATCATAAAAACCTCCTAA690.10534511977282096No Hit
CTAAAGGGAGCAATCAGACTGTCGACATTCCAGAAAATGTCGACATTACTCT690.10534511977282096No Hit
CTCGTTGGGAGGGCATTACATAATGTAAAGCATTCAGTTCAACAAGAATACC690.10534511977282096No Hit
GGGCAAGGGAGACATCTGGGACTGTTGTTCTCTCGCGGCGCGACCGCCTCAG690.10534511977282096No Hit
TGACGTGGGCAGTCTTGATTCATGCTTTGTTGCTCACTAACTAGGAGTCTAG690.10534511977282096No Hit
CGCAGCGGGCATTGATTCTTAGAAGAAAAGATTTGTTATTACAAATAAAATT690.10534511977282096No Hit
ACAAAAGGGGATTACACATGCAAGCATCCCCGTTCCAGTGAGTTCACCCTCT690.10534511977282096No Hit
TTGTAGGGGATGTAGAAGGAGGTAATTTTCATGCCAGTTCACAGCAGTGGGG690.10534511977282096No Hit
GGTCCTGGGACCTCCAATTTATATGTGACTTACAACATTTTCTTATGTCTGG680.10381837890654819No Hit
CATACAGGGCACCCAGCCTGCATTCTTGCGAATTTAACTGGTCCTTCCATGA680.10381837890654819No Hit
GGCGTGGGGATGTTAATGAATGTGATCCAGGTGTCAACTTCAACTAGTGGTT680.10381837890654819No Hit
AATTCAGGGTGAAAGGGATTACAGTATCACACAATGTCAAGCTAGAGTTAAA680.10381837890654819No Hit
GCAAGCGGGCTAGCAGAGTAAAAATACTGTATAAGTTCCGGGATTATTCAAG680.10381837890654819No Hit
ATTTAAGGGAAAGGATTCTGAGGAAGATACTAGTGGTCATGTTATACATTTA680.10381837890654819No Hit
TGGTCGGGGATTTGTGGTAATCTCATTTGTTGGTTGTACATCTGATCCTTTC680.10381837890654819No Hit
AGCCTGGGGCCCTCAATGATGCTGTCATGTTCCACTCACATCATATTGGCTA680.10381837890654819No Hit
GATAAAGGGCCAGTGAAAATTGTGTGGCTATTTTGAGTAGAATTGGTCAGTT680.10381837890654819No Hit
CACTTAGGGTAACCAAGATGGACCTCAGCCTCCCAAGTAGCTGGGACTACAG680.10381837890654819No Hit
GCAGGTGGGCCTGACCACTCAATCTAAGAGAGCAACCTGTTATTCTTCATAT670.10229163804027543No Hit
GGTCGCGGGCGATCTTCAGGTGGGGTTCAGATCAATGATATAGTATATTTGA670.10229163804027543No Hit
CGTGCCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC670.10229163804027543No Hit
CACTGGGGGATTTCAGTCTGATTAAAAGGAACGGAAGCATTTCCATCATAAG670.10229163804027543No Hit
TATCCTGGGATATAAATAAAATTTGCTGTTAGCTTTAGACCTATATTCCTAA670.10229163804027543No Hit
CACTTCGGGGGGAGGCGGGGCCTGCGGTGAGCCAAGATCGCGCCACTGCACT670.10229163804027543No Hit
CAAAATGGGGAAATCATGTAATGTGAGGAGAAAAAAAGAAAAAAGATTGAAG670.10229163804027543No Hit
TGTGAAGGGGAATATACATTCTTTTCAGCACCACACCACACCTATCCCAAAA670.10229163804027543No Hit
GCACTGGGGATTTCGGAGTTATGGGAAGAAAGCTTTAAAGCTTTCAGCTTCT670.10229163804027543No Hit
GACATAGGGAGATGCCCCTGCACTTCCCTCCTCAAGTCATCTAAGAAAGAAT670.10229163804027543No Hit
TGGCAGGGGCACTGTAAAAATAAAGACAGTTATAGAACTGACATGTTCACAA670.10229163804027543No Hit
CAAACCGGGATAAGGATAGGTGGGAGAGGTCCATTCTTTCATAAGTTTGGAA670.10229163804027543No Hit
TTGGCCTGGGGCATCAGAGATGGTAATCTACAGCTCACCTCTGAAGGCAAAT670.10229163804027543No Hit
CGTAATGGGTGGCTAAATCTTGGTATGTGGTTTTTAAACAGTCACTCCGTTT670.10229163804027543No Hit
TGTTAGGGGCGGTCACCTCTTTTGCCCAAATTTACGTATTGGAAAAAATTCA670.10229163804027543No Hit
GAAATAGGGACATACATGTATACATATGATTTTGATGAACTAATCTATAAGT670.10229163804027543No Hit
TGCGCAGGGTTACCATGCTTAGTGAATCCGTTTCACATAGGTGTTTTGTTTT660.10076489717400267No Hit
TAACAAGGGGAACAGCCTGCTCTGAGAATAAGGGGAAGAAGCAGATGGAGAT660.10076489717400267No Hit
TCGCCGGGGGGTTGTAAGTATATGGAGTAAATCCATCCATCTTCTGGAAGAA660.10076489717400267No Hit
AAGCAAGGGATGACAGAATATAATGGTTTTACCTGGCTACCTATTTTCAAGA660.10076489717400267No Hit
AATAATGGGAGGTGCGCAGCAGCCAGTTCGCGCGGAAGCTGTGGCGGTCCTC660.10076489717400267No Hit
CAGCCTGGGTGACAGAGCGAGACTCCATCTCAGAAAACAAACAAACAAAAAG660.10076489717400267No Hit
CACACAGGGACTGAATAGCATGTAAAACTTTCTCATGACTATATCCAAAAAT660.10076489717400267No Hit
CAAAAAGGGGTATACATGTATCAAAATATCACAAGTACCTCATAAATGTTTA660.10076489717400267No Hit
GACTTGGGGGAAGGGGATGGGCTGGGTTCTAGGATCTTCCGTGACCTCCTCT660.10076489717400267No Hit
TGGCGCGGGGGTTGTAACTGTGAAATTACTGGAGGAGCAATTTGACAAGCAG660.10076489717400267No Hit
ACTAACGGGGATGTGATATGTAGAAGGGAAGGCCGCGGTGTGCCAGAAATCA660.10076489717400267No Hit
TGAAAGGGGAGAACTATCAAACTCCTGAGCCAACAACTTAATATGACTAGCT660.10076489717400267No Hit
TGATATGGGCAGTAGGCTGTGTTCCAAGCAGGAATTATTTTCACTTACCAAA660.10076489717400267No Hit
GTTGAGGGGAAGAACATCCTCACAGAGATCTACCGCATCGTGTCACAGAAAC660.10076489717400267No Hit
TCCTATGGGCTTGAGAGAAAGGTGCATCAACCACAATGGTTGATTTTGAGAA660.10076489717400267No Hit
GTGGTGGGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTC660.10076489717400267No Hit
AATGCAGGGAGCCTAGGCAAGATGATGAAACCTTGTCTGTACAAAAAAAATA660.10076489717400267No Hit
GCTCTTGGGTTTCAGAAGCCATTCTGGATTTAAAAGAATCCAGAATGGCTTC660.10076489717400267No Hit
GCAAGAGGGTGCTTCCTGTTCCTATACTATTTCCCTTTTTATGTAGCTCTTC660.10076489717400267No Hit
AACAGTGGGATGTGGGTCTATAATAATTGTATTTTCAAGAGGTTTTCACTAT660.10076489717400267No Hit
CTTCAGGGGCAAGGAATTGAACAACACATGTGAACCCGTTGTAACACAACCG660.10076489717400267No Hit
GCTAAAGGGTATGACATTACTTTCATGTTAAAATGAAGACCATCCCAAAATA660.10076489717400267No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)