FastQCFastQC Report
Sat 31 Dec 2022
SRR5847634.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847634.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93206
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGAACGGAAATCTCGTATGCCGTCT8760.9398536574898612No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGAACGGAAATCTCGTATGC8690.9323434113683668No Hit
CAAAAGGGCACCCAAGAACAGGGTTTGTTAAGATGGCAGAGCCCGGTAATCG1370.14698624552067463No Hit
ATACCAGGGAATGGAATAAAATTGGAAATCAATAACAAGAAGAAACTACAAA1290.1384031070961097No Hit
ACAGATGGGCTTCAGCATTTGTGCTGTCTACCTCTCACTGGGTCCTGGTGGG1260.13518443018689785No Hit
AACTGTGGGAAGTAGACAGATTGTCAAGGCAGAAAGTCAACAAGGGAGCACT1220.1308928609746154No Hit
TTAATAGGGATTCACACAAAAACCTGCCTCCTAACATTTATAGCATTTTTTT1210.12981996867154474No Hit
CAGCGGGGGTGGAAGATTTTGGAGAATAAGATATTTAAAAATTGCAAAATGT1190.1276741840654035No Hit
ACCATAGGGAAATGAAGAAGAAAGAAATTAAGACTTTCACCTGTTATAAATC1140.12230972255005043No Hit
CTTATACACATCTCCGAGCCCACGAGACGAACGGAAATCCTGTCTCTTATAC1140.12230972255005043No Hit
GTAATAGGGTCCACAAATGGAAGAGATCATTGCATTTTGCTTTGGTAATGAG1090.11694526103469734No Hit
TGTTAAGGGGTTTCCACCAAGACTTATGAGACTCCCTGCATCCCATGCCCTA1080.11587236873162672No Hit
CGTCGAGGGGAGTTGAAGTGGCGAGAGCGCTCAGATACGCGACGCGTAGCAG1070.1147994764285561No Hit
CTAGTAGGGCGATCTTGTTAAGGGCAACATGGGTCAGGGAAGAACATGACAA1070.1147994764285561No Hit
TCCCCAGGGGGGTAGTCAGTTGACGAAGATCTGGTTTACAAGAACTAATTAA1060.11372658412548547No Hit
GATCCTGGGAGATTGAAATAATTTTAAAAATCAAGCAGAAATTCTGGATCTA1060.11372658412548547No Hit
AATACTAGGAGACAAGGTAGGTCATAGAATTTCTTTATGGCCAGTTCCAAGA1060.11372658412548547No Hit
TTTCGCGGGATAAGAAGTTGCTCTGAGCCCATTTATTTAAACTCTTTAGTTC1050.11265369182241486No Hit
GTTACTGGGAATGCCTGAGCAGCGCCTCGGAGCCCGGCCCGCCCTCCGGCTA1050.11265369182241486No Hit
GGCAGTGGGCTGGTGGCCCTGGTGCAAGTCATGCCTTGGTGCAGCCCTCAGG1040.11158079951934426No Hit
GTAGAGGGGACTCGGGATCAATTCACTGGGTCCAGCTCACAGAAAGACGTTG1030.11050790721627363No Hit
AGTGCGGGGATTTTAATGAACTTTGATTGGTTACTTTTCCAGACATACAGAT1030.11050790721627363No Hit
AAGTGTGGTTATGTTCCCAGCAGTGGGGGTCAGACGCCCTTCCTCAGAACTT1030.11050790721627363No Hit
GCATATGGGGGGAACTGGCCAATCTGCTTTTCTCCCTCCTGACAGGTGAATT1020.10943501491320301No Hit
ATTCGGGCAGATGATGATCTAGCTTGACTTCTGTGACAAATGTTGACCTTTG1020.10943501491320301No Hit
TGCTGCGGATAGCAGTAGTTCCAAGAGATGTTAATAGATGTAAGAAAAAAAG1020.10943501491320301No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGAACGGAAAACTCGTATGC1020.10943501491320301No Hit
AAATTGGGGGGGGCACCCATTTCAGGCAGAAGGTTTTGGTACCCTCCACTGA1020.10943501491320301No Hit
TTTAAGGGGGTGAAAGATTAGTTTAGCCCATTGCCCTTGGGCAGCTGAATTA1020.10943501491320301No Hit
TTTAGTGGGAAACTAAAGAGAATTCAAAAAGGGCTGATGGTAGGCTTTGAAC1000.10728923030706178No Hit
CTTCGAGGGGCAATGCACTGGTGCTCTATGTCGGGACTCAGGCCATTGCGCA1000.10728923030706178No Hit
AAGAAAGGGGCAGCATCGACAGCGAGTTCAGCAATGCCATTGCATCCATCCG1000.10728923030706178No Hit
AACTGGGAACAGTAGAAACATTTCTATATTCTGGGGCATTCCCTTGTACATT1000.10728923030706178No Hit
TATCTAGGGGAAAGAAATCATTAACATCTTTACCTTAAAATATTTCAGTCTG990.10621633800399115No Hit
CGAGTAGGGAGTGGAAAACAAAGAATGTAGAAAATATAATGAGTATGAGGCC990.10621633800399115No Hit
GGATTTGGGGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCAT980.10514344570092055No Hit
GAGGAGATAAAGATATCTTTAGAAAATGGTATCCATTAGTCATTCATTTCAA980.10514344570092055No Hit
CACACTGGGGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAG980.10514344570092055No Hit
ATGATAGGGGGCAGTTTGAATCGCGGTGCGACGAAGGAGTAGGTGGTGGGAT980.10514344570092055No Hit
TACTCCGGGGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTC970.10407055339784993No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGAACGGAAATCCTGTCTCT970.10407055339784993No Hit
TTATCTGGGATTTTGCAGCCAGACAAGCCTTGAATCCTTTTGGCACTAACTG960.10299766109477931No Hit
AACAGCGGGATTGCGAGCAAAGTGCCGTCGCTACAAATCTCCAAAATCAGAA960.10299766109477931No Hit
CAATATGGGGTGTGTTAAAAAGACTTCTAATAGCACGGTTCATCATTCATGT960.10299766109477931No Hit
CCTAGGGGACTACACTAAAACTCCATCTCAAAAAGAAAAAATAAACAAAATT950.10192476879170868No Hit
AACTAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC950.10192476879170868No Hit
GCCAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA950.10192476879170868No Hit
ATGTCCGGAAGTATCAATGGCATTTTATGTCCAGCTAACATCCTAAAGCATT950.10192476879170868No Hit
ATTGCAGGGCGATCTTGAAGGGGAATGTGTAAAATGCTGATTTTAAGTGCGA950.10192476879170868No Hit
CTGAATGGGTAGGGGAAAATAGTAGCAGAGTCATTGTTACAGGTGTACTATG940.10085187648863807No Hit
TTCGGCGGGATTACATAATGGGAAAGGCATCAATTCAACAAGAAGAACTAAC940.10085187648863807No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)