FastQCFastQC Report
Sat 31 Dec 2022
SRR5847507.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847507.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62759
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACACCCGTAAATCTCGTATGCCGTCT5120.8158192450485189No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACACCCGTAAATCTCGTATGC4750.7568635574180596No Hit
GTACAAGGGGTGTGTTTTACAATTTTATGTTCCATAATGATGTATCTCGGAT950.15137271148361192No Hit
TTGCGAGGGTACCTGAGGGGTTCATGCAACTGACTTTTCTCAATCAAAGGCA880.1402189327427142No Hit
GAGAATGGGGCCAACATCTGGTAGATATCTTAGGTTTCCTCAGATAATATTC860.13703213881674342No Hit
CTTATACACATCTCCGAGCCCACGAGACACCCGTAAATCCTGTCTCTTATAC860.13703213881674342No Hit
GCCGAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA860.13703213881674342No Hit
GTACTTGGGATTTTCGCTCTTGGATATCAACCTTGGTTCTTTTGGGATATTG850.13543874185375804No Hit
TTCTCCGGGGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTG840.13384534489077263No Hit
GTATGAGGGGGCTGCAGAGAGGAGAGAAGGAGTAGAGAATGAGGTGTTCAGC820.13065855096480186No Hit
TGCATTGGGGCCCTAAGTCTCTTTTAATCTACAGTGGTTCTCTTTCCATTTA800.1274717570388311No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACACCCGTAAATCCTGTCTCT800.1274717570388311No Hit
GCACGTGGGATGTACTAGCTCTTAAAAATGTCTGCGTTCTTCCCAGAAGTGA790.12587836007584569No Hit
ACCATGAGGCAGAAATCCCTGGGACCAAACCGTGTTAACATTCAAAAAGAGG790.12587836007584569No Hit
TTTAGAGGGGAGCCCGGACGGCGCCTCTCGAACGAGTGTGGGCGCGAGGCAG780.1242849631128603No Hit
CGCACGGGGAGTGAATGCCTTCTTCTGCATGGACTATGTGCAGAGACTGGAG770.1226915661498749No Hit
TCAATGAGGGGATTGTCTTAATCTTCCCAGAAGCTGTTTGAAATAGGAATTA760.12109816918688954No Hit
TACATAGGGGCATTTTTCCGGTATATTGATTGGGAGAAACTTGAACGCAAAG760.12109816918688954No Hit
GATTTAAGAGCTTTGCTACTTCAAAAAATAAATAAATAAAAATGAAAACAAG750.11950477222390414No Hit
TAGAGTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA750.11950477222390414No Hit
GAATGAGGGGCTGTCGTGCCCCCCTCTGTCAAGACTCCGACACCTGAACCAG740.11791137526091874No Hit
TGCAAATGGGTAGTCAGTGGGCCGAAGAGGAAATCAAAAGAGAAATAAGAAA740.11791137526091874No Hit
TAGTGCGGGATGTTAAGCAAATTATTTTGAGACCTTTTGCTGGTAGACAAAA740.11791137526091874No Hit
CACAGGGAGTAATGATAAATGTGAACATTTTTGCTTATTCATTGAATATTTT730.11631797829793336No Hit
GGTAATGGGGCATATAAAAGTTGGGGGAGATAGCAAAACTCAGATCTTTCAG720.11472458133494799No Hit
CTGCGAGGGACCAAACATATTCTTAACAACTAAAGGATCTTGAGGTAATTAA720.11472458133494799No Hit
TTACTCGGGATAATATTGAATGTCTTTTGGTATAATCTGACATGATTTATTT720.11472458133494799No Hit
TTCGGTGGGAACCTAGCTTTCTTAGTTTGTAGATGTAGGAAACAAAATAGTG720.11472458133494799No Hit
ACATATCGGGATAATTGGAATGGCATTTGCCTTTTAAAATTTGTTTCATTTG710.1131311843719626No Hit
TGTCTTGGGCAGCAATCCAGGAATGAGTGAAGCAGGGAACTTTGGTGGGAAT710.1131311843719626No Hit
CGCTAAGGGGATTTCAGATTTTTCTTAAATGTAGTTATTTATATCCATAAAT710.1131311843719626No Hit
GAGGTTGGGCATGGTATAGCAAAAAAACAACAACAAAAAAAGAATAAAAAAT710.1131311843719626No Hit
TGTCAGGGGGCAGAGAGAAAATTCAAGCAAGTAGCGGAGGCATATGAAGTGC700.1115377874089772No Hit
AATTCTGGGAGAGATCTCAATCATAAGTACCTTAGGGAAAAGGGGGATTCAG700.1115377874089772No Hit
TGAACAGGGGATGAAAACACTCTTATTGCTGCAGGCAGCTGTGATAAGGTAG700.1115377874089772No Hit
TCTACTGGGACCCACCTCAACAACAACTTCATGTTTGGGCAGAAGCTGAATG700.1115377874089772No Hit
CCAACGGGGACCAGCTTGACATATTTACCCATGACTAAAGAATTTCCCATAA700.1115377874089772No Hit
CTTTCAGGGGAGAAGGAGTCAGTATTTTTAACGACATCTCTAATATTCATGC690.1099443904459918No Hit
TAGGTAGGGGGAATCAACTTTGATTTCCATATGGATAATCAGATGTATCAGT690.1099443904459918No Hit
CTAGACGGGAATGTACATTTAGGAAAGTAAATAGCTTATATATAAAATTTAT690.1099443904459918No Hit
GTTAGCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC690.1099443904459918No Hit
GTCCATGGGTGGTTTAGAAATTGCTCAATAAGTCATTTGGGGTTTGGCATCC690.1099443904459918No Hit
ACGTAAGGGCTATTTGGTGGGAATAAACAGACCCACCTACTATCATCAGAAA680.10835099348300642No Hit
GCGCTGGGGTCGGTGCCCGGTTCGGTCCTCTTGGAGCTCACACTCCAGTTGA670.10675759652002104No Hit
CAGTCAGGGTGACCAGCAGTGTGCTTCACCAGCAGTATGGATATTGTCTTTT670.10675759652002104No Hit
TCAAGGGGGTGTGTGGCTGTCTGGGTGGATCAAAGAAAATAGGGACTGCCTT670.10675759652002104No Hit
CAAAGAGGGATCCCAGCATGCCCAAGTGAGGAATTGGAAAAACTGAAATGGA670.10675759652002104No Hit
GCCGGCGGGTTAAGGATTCAGAGTCAGCTGATGCAGGCGGCGCTCAGCGAGG670.10675759652002104No Hit
TGTGCAGGGATTCAGGTCTCTTGTATAAGAAAAATAACCATTGTGGGGTTTT670.10675759652002104No Hit
GATAATGGGATATAGATGCTTACCATTAACCTACCAACTCTTAATATCCTTA660.10516419955703565No Hit
GCAGGTGGGGTCAGGAGGAAGAAGACCTAGCTTTAGCACAAGCACTGTCAGC660.10516419955703565No Hit
GTTCTAGGGATGTGTTAAAAACGTGTGAATTATTTATCCTGTAGTATCTTAC660.10516419955703565No Hit
ATTGTGGGGCATTACTATTGAATTATATCACAAAAATAGAGGAGCATTTGAA650.10357080259405026No Hit
AAGACTGGGGTGCCAGGCCTTGGTCGGTGGTGGTACGTAACTGTGCATTTGT650.10357080259405026No Hit
CAATAAGGGGAAAAAATGTCATGAACCTGAAGATAGATCATAACTTATCCAA650.10357080259405026No Hit
GTTTTTGGGATGAGAAGTGGTAGGAATATGGCTATATTTTGAAGCTGACAGG640.10197740563106486No Hit
GATAAGGGGGTATAGATCCTTTTATAAAGCACCTTTTGTTAAACATCAGCCT640.10197740563106486No Hit
ATTACCGGGGTTGAAATGTTTCTTTGGACAGATTAAGTTGATATTGTGGGTT630.10038400866807946No Hit
TTCATCGGGGCCTTTTCCAAGCGGCTGCCGAAGATGGCGGAGGTGCAGGTCC630.10038400866807946No Hit
TGGCTTGGGAAACCACATTTTGAGCAGTGAGTGAATCCAGCTGGTTGCACTA630.10038400866807946No Hit
ACTCAAGGGCATGTTACAACGTTCGTAAAAGCTTGTTAGGACTTTTGTTCTT630.10038400866807946No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACACCCGTAAAACTCGTATGC630.10038400866807946No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)