FastQCFastQC Report
Sat 31 Dec 2022
SRR5847226.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847226.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125700
Sequences flagged as poor quality0
Sequence length52
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGCCGTCT20221.6085918854415275No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGC19671.5648369132856006No Hit
CTATGACAGGGCCAATAAAGTCTGGGTTTTTAAATGTGCACCAACTTCTATT3200.2545743834526651No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGG2930.23309466984884644No Hit
GGAATAGGGGGAAGAATACCACTGGAATATTGATAGACATTTCACTGAATGT2390.19013524264120923No Hit
AATGCTGGGTATGTAAGAGAGAATTCTTAATTTTTAAAATTTTTGACCTGAA2230.17740652346857597No Hit
TATGTTGGGGCCGGTTGACTTTGCGGAGCCATGGAGGGCGGCTTCGGCTCCG2230.17740652346857597No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGA2160.17183770883054894No Hit
TACAAGGGGAGTCAGTGATTTGTGAGAACCCAAGCGATGATCAAAATATGAA2150.17104216388225935No Hit
TTCGCGGGGGGTGGCCAGCCAGTACGGATGGTCTGGCAACATGGAGAGAATC2110.16785998408910102No Hit
TCCTTCGGGGACGCTCTTCCGATCTGAAATAGGGATAGAAAAGGTATAGTAA2040.16229116945107397No Hit
TTTATTGGGGGTTCCAGCAATGGAAAAGCAGCTTACACTGGGCCAAAAGAAC1900.1511535401750199No Hit
CAGGTGGGATTTGAGACAATGTTATCAAATATGGTAACTGAAGCTATTGAAG1840.14638027048528243No Hit
GTAAATGGGGTACTTTGTGGCAATAGAATTATTGTCATGAAACTCGATTTTT1830.14558472553699284No Hit
TCCCACGGGAGCGCCTAAGAATGAGTTGGTCCAGAAGTTCCAAGTCTATTAC1830.14558472553699284No Hit
TTTACAGGGGGAGAAACACTGGACGTGTCTCTCTACAAAAGAGCTTTTACTG1820.14478918058870327No Hit
GTATTTGGGGGAGGAGTTGCAGTGGAAAGTTAAATGAGGCTGGAAAGTTTTG1820.14478918058870327No Hit
TAAAGTGGGGAAAAAATTTTTGAGATTGGTTGTACAACAACGTGAATATATT1820.14478918058870327No Hit
CTACGCGGGAGTCAGAGTTTAAATACATTTCATACTAAACATAGCAATACTC1820.14478918058870327No Hit
GTGGGAGGACTTGATATTCATAATTCAGTGCTGTGGAAATGAAAAAAATGAT1790.1424025457438345No Hit
TAGTAAGGGTGCTGTCTTCATGACAGTGAGTGAGTTCTCATGAGATCTGGTC1770.14081145584725535No Hit
TGAATAGGGTAGAGATGGGACTAGAGAAGTCACCTCAAGATTGGTGACAGAT1750.13922036595067622No Hit
AGCGATGGGTAGTATTAGTCTCCACTAAGAAAGGGACAGGGAGGTGTGCAGG1730.13762927605409706No Hit
AGCGCAGGGATGTTCTTTCAAGTGTTGGCCTTTTATTGTCTTGTATTTGTGT1720.1368337311058075No Hit
ACTAACGGGCATGCACCAAGGCAGCTGTTGCAGCATTGTAATTGTTTTCTAT1720.1368337311058075No Hit
TCAAGAGGGCTAACCTGTGCCCTGTGGTTTCTGGAAGGAAAGGCAGACTTTA1710.1360381861575179No Hit
GGTGCTGGATAGCAAGTCCTATAATTCTCATTAAACACAGGAACCCAGCACA1680.13365155131264916No Hit
TTAATTGGGAGAGCCAAGCACGGTGCCTGACATTTCTCCACTGGACAAGTGA1680.13365155131264916No Hit
ATTGAGGGGCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGAA1680.13365155131264916No Hit
CGCATTGGGACAATATATTCTGTAATGAAATGAGGAGTGAATCTGAATATTT1680.13365155131264916No Hit
GAAACTGGGCATGAAAGGCTTTTCTGCAGCAGCGGCCATTGTCCTTTCCACC1680.13365155131264916No Hit
TACTTAGGGGGGGAGAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAG1670.1328560063643596No Hit
ACACCCGGGCCTTGCTGGCATTGAATTAACACAGGGACAAAATTTGGTTAAT1670.1328560063643596No Hit
GAATAAGGGGATCTTCGTCAGGGGCACTGGTGATAAACATCCCTCCAAGAGA1650.13126491646778043No Hit
AAGAACGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1640.13046937151949084No Hit
GAAGCAGGGAACCAGATTTTTAGATCTTGTGTGATTTCCAAGCCTTTTCAAT1630.12967382657120127No Hit
ACGAAGGGGATCCAGTTAATCACCAGTAATCATGATGCTTTATGAATGACAA1610.1280827366746221No Hit
AGCAGGGGAAAAGAGAAAATGGTGGAATTTTTATTGAAAAAGAAAGCAAGTA1610.1280827366746221No Hit
TCGCTAGGGTCGGCAGTTTAGTCATCCACCGCCATCCTGGGCCCCACGTGTT1610.1280827366746221No Hit
CACTACTGGGTATCTACCCTGAGGAAAATAAGTCATTATACAAAAAAGATAC1600.12728719172633254No Hit
AGCTCAGGGAATATCAGTCGCCCCATCGTCTCCTCCCATGGGTAGGAGGAAG1600.12728719172633254No Hit
TTTCATGGGGTGATAAATGAGCATTGACCTCAACTTAAAGTCACCAGCCCGT1590.12649164677804298No Hit
GATATGGGGGGCTGAAACAGTCAGACCTACACCTAGGAGATGAGATCATTCA1580.12569610182975338No Hit
CGAGACGGGGGGACCAGGTGAAGGCTATCAACTTCCTGCCAGTGGACTATGA1570.1249005568814638No Hit
CCAAAAGGGGTGGATGGCAGTGTGGGGAGGGCAGGTCCAGCTCTGTGGGCCC1570.1249005568814638No Hit
CATATAGGGAACCTGTAGGATCTTATTTGGAATTGACATTCTCTATTGTAAT1570.1249005568814638No Hit
CGCATGGGGCAGCAGAGTAAATAGACAACCCAAAGAGTGGAAGAAAATCTTC1570.1249005568814638No Hit
AGCCATGGGTGTCCCAGAAACACATCTTCCACCTCAGCAGCCAGTGGGAAAA1560.12410501193317422No Hit
CACGCTGGGATGAGAAGTCTGTACTCTCTGCTCCGTTTAGCTGTGAACCTGC1550.12330946698488464No Hit
TTGCTTGGGTCTAAAATGAATTCAGAGAAATAGATTCCTAATCAGAGAAGGT1550.12330946698488464No Hit
TGGTATGGGATCAAGGGGGGTAAATATGGGGATCTACTTTCTAAACCTTAAA1540.12251392203659506No Hit
GCTGGTGGGGAAGCTGCAGAACGACAAGGCTAAACTAGAAGTGAAATCTCAG1530.12171837708830548No Hit
GGCTAGGGTGATCATTTTATGTTTGAGTAACTCAAAACATTTGTAGGCATCA1530.12171837708830548No Hit
CACTCTGGGGCTTAGCAGTATCCCTGGCTGGAAGTGCTCCTCCCACACCCCT1530.12171837708830548No Hit
TCGCACGGGTGCCTCACAGGACTTTATTTTATGGGCTTGTGTTCGAGCTACT1530.12171837708830548No Hit
AGAGTGGGTATGCTAAATCAGCTAGTACTGAAACTGTTCAGATATGCAACAT1530.12171837708830548No Hit
TGGTCCGGGCACCAGGCCTATCATTTTTCTTTTTAGAGACAAACGTGACAGG1520.12092283214001592No Hit
ACTTGGGGAGCAAAAACAGTAATAGCTACAGCAGCCTGCTAAGAGGTAATAT1520.12092283214001592No Hit
ATTGTTGGGACATTTCTCTTCTTGGTGTTGTAATACTATATTTTGTCAATAT1520.12092283214001592No Hit
TTAAGTGGGTGGTATCAATCAGAGATCGAATTAAATATTATAGTTCATTAGG1520.12092283214001592No Hit
AGTATAGGGGTTGAACCACCCTTGCATCTCAGGGATAAATCCCACTTGGCCA1520.12092283214001592No Hit
TTGGTAGGGACTGAAGAAGCAGCATCTTTTCATGAAATGTGTTCTGTTGCTT1510.12012728719172634No Hit
AATAATGGGGTCACCTGACTTCTTACTACAAGAACATCCTTCAGAAGTGAAA1510.12012728719172634No Hit
CTATAGCGGGATAGAATACTTTAAAAATGCCCTATAATCAAGGATCCTAGGT1510.12012728719172634No Hit
GCCGCTGGGGGTAGTAGAAAAATTGCTACCTCTAAGAATGGATCCTGGAGAG1500.11933174224343676No Hit
GCGACAGGGGCAAACAGAGAGCCTGTGGGAGGGGCTGACAGCAGCAGCCGGC1500.11933174224343676No Hit
AGCTACGGGGGGATCTGAGGTACAAACTGGAACCCGGGTCTTCTGGGCTCAG1500.11933174224343676No Hit
CGTTAGGGGCAGCAGGTGGTTATCTACAAGCGAGGATGAGAGGTCTCACCAG1500.11933174224343676No Hit
GTAGCCGGGACAAGATGGCGCCGAAAGCGAAGAAGGAAGCTCCTGCCCCTCC1500.11933174224343676No Hit
AAAGTAGGGTAAGATCACCATTGAATACATGGTCTGTGGTTGAACCAAACTT1500.11933174224343676No Hit
CAACGCGGCGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1490.11853619729514718No Hit
GCATTAGGGACACCACTTACTACCTTATGAATTCAGGCCACTTACTCAGTTT1480.1177406523468576No Hit
TTACGCAGGGGGCAGCGACATGAAGTCAGGTATGCTCTGGGTGCGTGCTCTA1480.1177406523468576No Hit
TGTGCCGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1460.11614956245027844No Hit
CAAGCTGGGTAGGCAAAGACTAGAGTTGTAGCTTAAAATGTAGTTAATGTAG1460.11614956245027844No Hit
AGTAGTGGGAAGAGAGTATTTAGAAGTGGAATGGGAAGTTAAAAAAGGAAGC1450.11535401750198886No Hit
TCCTTAGGGGGTTTATTTTAAATGCGTACATATTGACCAATGGCCTCTGAAA1440.11455847255369928No Hit
TGACCCGGGAGTGAGAGGTCTTGGAAGGATCCTTGCGCCTCTCCTCTTTGTT1440.11455847255369928No Hit
CAAAGTGGAATGACTGGCATTTGAGATGCTGCTGGCATTTTGAATTCAACAT1440.11455847255369928No Hit
AGATAGGGGAAGCAGAATGAAGGAAAAAATGAAGAGCAGAAATTAATGAAAT1440.11455847255369928No Hit
TAGAGTGGGCCAGCAAGTGATCAGGAAGACTAGGAGCTATTTCTGACTGTAA1440.11455847255369928No Hit
AAACTAGGGGGTCCTGTGCGGTCACTTAGCCAAGATGCCTGAGGAAACCCAG1430.11376292760540971No Hit
TCAGCCGGGGCTCTTCTGGGGGTGGATTATAAATTTCTTTCATACGGTTGTA1430.11376292760540971No Hit
TGTACTGGGGCCCCGGCACTGCGCACTTGCCAGCCAGTCCGCCCGTCCGGAG1420.11296738265712013No Hit
TAGTAGGGGCCATACAGTTGACACCATCCTATTACAAGAAAAACCTAACAGT1420.11296738265712013No Hit
CAATCTGGGAAGTAAAAATAGAGGTATATACCATATATTCATAAAACATGTA1420.11296738265712013No Hit
ACTTATGGGAGAGAGAGAGAGAGAGACTTGGAGAGGGAAGGAAGGGAAGGAG1420.11296738265712013No Hit
ATTATGGGAACTGTTCTCTGCCTAGCGGCATGGGATTTGTCTCTTTATGCAC1410.11217183770883055No Hit
GGCATAGGGGTCGACACTTCTTGACAGTTAATTTTTGGAAGCAGATTATCTC1410.11217183770883055No Hit
TAAAGCGGGGTTTCTGTGTTAGTAGTCTGTCTTGACACACATTGTTCAAACA1400.11137629276054097No Hit
TCGGCCGGGGGGGCGGGACCTGCAACGTCCGACAGAACGAGGGGACGTAACG1390.11058074781225138No Hit
TTTCGCGGGGCAAAGAACATTGAATACAAACATTGGTCATTTTAGCCAAGTT1380.1097852028639618No Hit
ATCAGCGGGTTAATAGGGAATAAGATCACCACAGAAAAATGTGTTCACCTTC1380.1097852028639618No Hit
GCAACTGGGTGGCTGAGTGCCGGGCACATCACCAAGGCTCAGTGATAGCTTC1380.1097852028639618No Hit
TTAATAGGGGAGTGGTGCTGGGAGTGTCGTGGACGCCGTGCCGTTACTCGTA1370.10898965791567222No Hit
TATCCAGGGGTAGCGGCCGTGGAGGAGGTCGGCTCAGCCGGGCAGTTTGAGG1370.10898965791567222No Hit
CGAAATGGGGCATTGGGTTTTTTCAAAGGGGGAACACTTTAGTGAACAATAG1370.10898965791567222No Hit
CGCAACGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1370.10898965791567222No Hit
GACTGCGGGCTGTAGCACTTCTGTGCCTTAGTGATGCATGTCCTACCTCCAT1370.10898965791567222No Hit
ACTTCCGGGAGGAGCAGTAGGCCATACCATACAGCTTAGGTGTGTTGTAGGC1370.10898965791567222No Hit
ACTATTGGGCTCCTGAGATCTTATTGGGAAGCTGCTGATCACCAGCGTCAGG1360.10819411296738264No Hit
AGGATTGGGTGCTCACTGGAGCATTTTGGATTTTTGGATTTGGGATGCTCAG1360.10819411296738264No Hit
GCTCTAGGGCTGGAGCTTCAGTGTCTCTTCCCTCCCTCTAATAGTAATGGTT1360.10819411296738264No Hit
GGTACGGGGATGACCCTGGCTCATAAACACATTGTCAAGACTGTGGATTTCA1360.10819411296738264No Hit
CAAGTTGGGTACCAAGAAAAAATTAGTCACCTGAGTAACTTGGCCACTAATA1360.10819411296738264No Hit
CACCTGGGGATCCAGAAACAGACTTCCTTTGCCATCTTGGTAAATTTTAATC1360.10819411296738264No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGAACTCGTATGC1350.10739856801909309No Hit
CGAAGTGGGTCTACACGGGGGACCATTTTGAATGTGTATTTGAGAGAAAGCT1350.10739856801909309No Hit
TTCCCTAGGAAAAATGCCGAAGAGTCCAATTGCTGGATTGTAGTGGTTAGTT1350.10739856801909309No Hit
CGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGT1350.10739856801909309No Hit
TGCTCACGGGATGTGAGAGTACTTAGTTGAAACAAAAAGGAATTTTAGTAGA1350.10739856801909309No Hit
TAGTATGGGTAGTGAAATGAATAAAGTGTAAAGTTAAGTTCATAATAATGTA1350.10739856801909309No Hit
GTTCAAGGGGGCTTTGAACATGGGGTTGGCTGTTTCCCAGTAAAACTGGAAT1350.10739856801909309No Hit
GATTAAGGGATCCTGTGTTTGTGATTGATGTTTGCCTGCCTAAATGTACAAA1340.10660302307080351No Hit
ATTAATGGGTCAGACACATGAAATGTGGTGACACATCCAGCAACAAGTCAAA1330.10580747812251393No Hit
GTAATGGGAGTTTCATCTGCTGCTTCGTTAGGCTGGAGGGCATGTTCAGAGC1330.10580747812251393No Hit
ATAGTAGGGAGGAGTTTTTCTACGAGATAGAGCTCTCCACTCTGGCCACCAA1320.10501193317422435No Hit
CATGGCGGGCGGGAAATGAGAAAGAAGAGGAGTGAGGAAACAGTTATTTCCT1320.10501193317422435No Hit
TGCTACGGGGGGAGGTCCACTTTATTCTCAAAATTCAAGTAAGCTTGTGCTT1310.10421638822593476No Hit
CTTCTAGGGACAGCAGTCCTACTTCTCCTATCTCTCCCAGTCCTAGCTGCTG1310.10421638822593476No Hit
TGACAGGGGCGATCTCTTAAGGGGCCTGGCGTTGGTGACATGCTGCAGCCTG1310.10421638822593476No Hit
GCCATAGGGGGTTTGTTTCATTTTTGCCTATGTGTGATATATGTATTTCTAC1310.10421638822593476No Hit
TTCATTGGGGTAACAGATGTCCAAAGAGTTGCCATTTTCTTAACACTAAATA1310.10421638822593476No Hit
AGAGTTGGGTTATAATCTGAACCTAGGTATATCCTTTGGTCTTCCACAGTCA1310.10421638822593476No Hit
GGGGTGGGGATCTGGAAAAAAATTCATTTTAAATACCATCATTCAACAAATT1300.10342084327764518No Hit
CGCACCGGGTGGGAACAGGAAAGCCAACAGAGAGGCAGTGAAGGAAAGTTCC1300.10342084327764518No Hit
AATAAAGGGAGATATGGAGTTTCACCACGTTGGCCAAGACAGTCTCGATTTC1300.10342084327764518No Hit
CAATAAGGGATTGTATTACAGTTTGCCTCTTCCTTTAGATCTAATCATATTT1290.1026252983293556No Hit
GCTTCGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAG1290.1026252983293556No Hit
GTGTCAGGGAGCCATCCTGAGTTGCATGTGGCCTGTGGGCCACGGGTTGGAA1290.1026252983293556No Hit
TGACCAGGGATGCTCTTTGATGTTACATAAAAATAAAGTTTTATCTTTGTAT1290.1026252983293556No Hit
CCTGGGAGATTGAACATGAAGCCTGGACCTAAGAAATGGTTTGGTAGTGTTG1290.1026252983293556No Hit
GTTTACGGGTCATGGTATTTGCATATTTAACAGAACAAAACAGTAAGTTGGT1290.1026252983293556No Hit
CTCAAGGTGGGATTGTATGATTTTGCTCATTTTTAAAATGTATGTAAAAGGA1290.1026252983293556No Hit
CTGAAGGGGTCTAGAAAATAGAGTTGGAGAAGAGAATGAAGCTGATAATGTG1280.10182975338106602No Hit
TTTGCAGGGATCTCTTAAATTACTCAAAAGAAACTTCCGAAAACGTAGCTGT1280.10182975338106602No Hit
GGTAGTGGGAGGGAGTCGGCGCGCTCGGCCAGGCAGCCTCTGACAATAGCGG1280.10182975338106602No Hit
GAGTTTGGGTGGCCTTGCATGGTTCTAGCTTTGTAGAGCAAGTTTTTAATTC1280.10182975338106602No Hit
CTCTAAGGGATGAGATGCTCTTTCATAAATGATACCAAGTGCAAGAGAACTT1270.10103420843277647No Hit
GTAGTAGGGGGGAATCACAGCAGAGAGTCTCATTAAAAACCAAATCTTCCAT1260.10023866348448689No Hit
CCGCAAGGGGTTCATGCTTACCAATGAAATGTAAAATCAGCCTAGCACAGTG1260.10023866348448689No Hit
GCCTCGGCCTCCCAAAGTGCTGAGATTACAGACATGAGCCACCACGCCCGGC1260.10023866348448689No Hit
TTTGTTGGGATATATCTTTAACTGATGACCAGATCATTGTTGTTCTGAACCA1260.10023866348448689No Hit
GTATATGGGGATCTACGCAAGGGATTACAACCACTCCTCACACGCTCCCTGC1260.10023866348448689No Hit
TAAGAGGGGGAGTCCCTGCAGACCAACGTGCAGCGGCTGAAGGAGTACCGCT1260.10023866348448689No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)