FastQCFastQC Report
Sat 31 Dec 2022
SRR5847207.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847207.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73608
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGCCGTCT12401.684599500054342No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGC11291.5338006738398No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGG2380.3233344201717204No Hit
AGGGTAGGGTGTCCCATTCCCTGTATCAAAAGCAGGTAAAGACATTAAATGA1670.22687751331377023No Hit
ATCCGCGGGAAGTACCATTTTCTGATGAAAAGGAACCAGACCTGCCTGGAAA1500.20378219758721877No Hit
GAGCAGGGGATTGTGTGTTAAACAACACATCTCCCAGACACAGAAACACACT1430.19427236169981524No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGA1420.19291381371590044No Hit
TATTCCGGGAAGCAATAATTTGTCCATAGCTTTAAAAAGGTGACATGCACCA1330.1806868818606673No Hit
TACCTGGGGGATCCTCCCAGTCGGTGCAGCAAACTTCAGGGAAGCCATGCGC1280.17389414194109337No Hit
TGGTTTGGGCGATTAAAGAGGGCATCATGCTACTCAGAACTTAAAATATATG1280.17389414194109337No Hit
ATTTACGGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACG1230.1671014020215194No Hit
GGTAGGGGTCTGTGAACATGTATGAAGATATCAACATTATCACTGGTGCACT1170.15895011411803064No Hit
CTTTGGGACAACAAATAACTTTTTCTTCATGGAACGTACATCCTAGTAGGGA1170.15895011411803064No Hit
TGACTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1140.15487447016628628No Hit
ATTATCGGGAACAATATAGATTTGTGATTCTGCAATTTGTAGGGTCATTATA1140.15487447016628628No Hit
CGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGT1130.15351592218237148No Hit
GAGAAAGGGGTCTTTCCAAAGCGCTGAGGCTGTGCACCTATTCTGTAGTTGC1090.1480817302467123No Hit
TTGCTAGGGAGGAAAGAATAGACCCATATGAAATCATTATAATGCAGTGTGG1090.1480817302467123No Hit
CAATATGGGTACCACCTCTCTTATTTATCTAATAGTGAGGCAAAGAAATGAA1090.1480817302467123No Hit
AAAGCCGGGACAAGTATTATGTGTCATTAAAAATAAATTTAAAAAATTCCCA1070.14536463427888274No Hit
CACCATGGGGGTGCAGTCGTCACTCGTGTCTCGCTACCAGCTCCCCGCTGCC1060.14400608629496794No Hit
TACATAGGGAATCTTACTTGGGTAGAGATGGCCTTTGCCAACAAAGTGAACT1060.14400608629496794No Hit
TATTCCGGGGATACCTCAACACAATAAAGGTTGTATATGACAAACCCACAGC1060.14400608629496794No Hit
AACGCTGGGAGGCTCCAAAAACTCTTTCACTCTCATTGCACTCTATCCAATG1050.14264753831105315No Hit
TATAGCGGGGAAAGCAAGAGTTGAATTGCTAGCCATGAGGAAAACGTAAGCC1050.14264753831105315No Hit
AGTGCTGGGATTACAGGTGTGATCCACTGCACCCGGCCGGCATTATGATTTT1040.14128899032713835No Hit
TCTACTGGGTGGTGTGACTACTCCACTTTCATATATCTGTTCATATCACTGA1040.14128899032713835No Hit
TTTCGTGGGACGGCGGGGAACCATGCCAGATGACCTTCTGACCACGTTGGAT1030.13993044234322355No Hit
ATAGTCGGGCAGCAGTACCGGGCGCTCACGGTGCCCGAGCTCACCCAGCAGA1030.13993044234322355No Hit
CCTGGGGAGCTGGGAACATGGCAGGTGAGCAGAGCTTGGTGCCTCTGCCGTG1030.13993044234322355No Hit
TCAGCTGGGGACAGATGTTGTCATATGAGCATGTGGGAAAATTTAGTAAAAT1020.13857189435930878No Hit
ACACAAGGGACTGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTGCTG1010.13721334637539398No Hit
GCTTCGGGGAACCCTCAGTCCACTTTGTTTATAGATTCGTCTGTTCTGCATA990.1344962504075644No Hit
GTAGTTGGGCCTAAATAAATGAGCTGTTGGAAGAAAAGAATCACAGTACTTT990.1344962504075644No Hit
AACGCAGGGGGATGGAAACATTTTCTCACTTCCTTTTTTTCCCCTAGAGTCT990.1344962504075644No Hit
TATACGGGGGAGTGGAGCGGCCGCCGGAGATGCCTGACGCATCTGTCTGAGG970.1317791544397348No Hit
ATCATGGGGATTTGCACGCAATTGACTCTTTCAAAGTCTTTCAGTAGGTTAA960.13042060645582002No Hit
GCATGGGGATGTACGTGGGCAGAAGAGGCCGCTCAAGCTGTGTCCCCCCTGA960.13042060645582002No Hit
TGTCAAGGGAGAGAAAGAAGGTCCAGAAAAGAAGAAGACAAAAAAGGAAGCT950.12906205847190522No Hit
TGAGCTGGGATTCTCTAGGAACTCACTTTTGAGAGTATTTTTCTCTAACCCA950.12906205847190522No Hit
TCCCCAGATTTGGACCACAGGCTGTAGATTTCTGACCTCTGGCTTACAGCAG940.12770351048799045No Hit
GCAACTGGGCCTTCCAAAAGTCAGTCACAGACCACTGCAACATGCCTTCCCT940.12770351048799045No Hit
ATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGT930.12634496250407565No Hit
TTGTTAGGGACACACTGGAGACTGCCAACACTCAATGCCATGAGAAGATGCC930.12634496250407565No Hit
TACGAGGGGTCTCTGAGTGAAGTTAACACCACGTATTTTACCTTTGCAAAAA930.12634496250407565No Hit
GAAGCAGGGAGAACTAGAAATACCATTTGACCCAGCCATCCCATGACTGGGT920.12498641452016086No Hit
TTACGCGGGGAAATGAACTGTAGTAGGTGTGTAGTTTGGGGAAGTCAAATGG910.12362786653624606No Hit
AATCTTGGGAATGATTGATAAGCACCAGTGAAGAAGTTCTAACTTTTAGCAT910.12362786653624606No Hit
ATGCGGGAAGAATTATAAACCCCAGAATGAGATGGAAATAAACAAGTATTTT910.12362786653624606No Hit
GCTCAAGGGGCAGAGAGCAGGAACTTGATGCAGTCATAAACCCAAGCAAGTA900.12226931855233127No Hit
AGTGTTGGGGATACATTCCTAGAAACAGAGCTTGTAATTTTGTCTCAAAGGA890.12091077056841648No Hit
AGCCATAGGGGCATCGCAACACCTAAAGGATCCTCATTAAGAACCCCAGTAA880.11955222258450168No Hit
GTTGCGGGGAAGCACATGTGTTCATTGTGCGTATGTGTGTGCATGTGTGCGC880.11955222258450168No Hit
TTAAACGGGGACCCTCTGGGGACAAGAGTCTGAGCCGAACACCAGAGACACT870.1181936746005869No Hit
ATTCTAGGGGCATTCCTATTTCCCTAAGATCTACTAGTGATAATTCTACCTT870.1181936746005869No Hit
GACGTTTGGGCTGAGACTAAACTGAGGGATAGTGAAATAAAAATGGTGATTT870.1181936746005869No Hit
TAGAGTGGGATCCTGAGAGTGCACAGCAGCATTTCCATAGAAAACATTGCTT870.1181936746005869No Hit
ATGCGTGGGGGTGAAAGCAAAGCAGTCAGCCTCAAATAATTCAGGTGAGGGA860.1168351266166721No Hit
AATAAAGGGATACAGGGAGATTCTGTGTGCTCTTTACCTAGTTTCCCCAAAT860.1168351266166721No Hit
TGGTCCGGAACTGCGGGCTGCAAGCTGGGCTCCCCCCTTACTCCCCAGTGTT850.1154765786327573No Hit
ACCTATGGGTACAGAGAACACCATTAAGATACAACATGAGAAGATCAACCCG850.1154765786327573No Hit
GCCGTAGGGGGTGGCGGGGCCCGGCGGGGAGCGGGTCCGGAGCAGGCTCCCG840.11411803064884252No Hit
GTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGCC840.11411803064884252No Hit
TTGAGGGGGGCGGGCCCCTCACCTGCACCCCACCTTCACCCAGCTCTGGGTT840.11411803064884252No Hit
ATGCTGGGATTACAAGTGTGAGCCACCGCGCCCGGCCCAGAATAAATTCCTT840.11411803064884252No Hit
TGATGTGGGTATCGTGATGGCAAATATGACTTGGACTTCAAGTCTCCCACTG840.11411803064884252No Hit
TTTCAAGGGAAGCTGGATTCATGTGATGCCAGAGGAGTAAAATTTCAAGAGA840.11411803064884252No Hit
AACGCTGGGGCTCTTCCGATCTGACGCTGGGAGGCTATGGTGGCAGATAGTT840.11411803064884252No Hit
GCATGTGGGCAGGACTTCTGGTCAATATGAGAAAATTACAGTTGGTTAGCTG830.11275948266492772No Hit
GCATTTGGGTGGAAACTGCAATTTGAAAGCTGGCATACAGTTCTTGTTTATA830.11275948266492772No Hit
AGAATAGGGGTACCCAGTTTATTAATTATCTTTTTACATTCTACAGATGTGT830.11275948266492772No Hit
AATCAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA830.11275948266492772No Hit
CTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCCTGTCTCTTATAC830.11275948266492772No Hit
TCCTAAGGGATTCCTTCTTCCCTCGGTCCACGAACAGGAAGAGGCTGAGGCC820.11140093468101292No Hit
TCTGCAGGGAACGTTGTCCTCCTCATTGGAATTCACTATGAGTCAGAATCAT820.11140093468101292No Hit
AATATGGGGTCACAAAAGGCAGTTTGTCTACTACAGCAGAAGGCTGGTTAAC820.11140093468101292No Hit
GGCCTTGGGAAGATATACATAACAACAAAGCGCTTACCCTATTTTCCAATTG820.11140093468101292No Hit
TACTCTGGGGAGCTGATGTCAATGCTATGGACTGCACAAAAGTCTCAATGTT810.11004238669709815No Hit
TTTAACGGGTCCGATCTGTAGCTGGGGCCTTCTTTTTTGGGGATGGTGGGAG810.11004238669709815No Hit
GATAATGGGATTTGTTGTGTTGGTAGTTTACCTAATGCCCTTACCTAATTAG810.11004238669709815No Hit
TTGCATGGAGGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGG810.11004238669709815No Hit
CCGAAGGGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTA800.10868383871318335No Hit
GCAGGTGGGATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGCC800.10868383871318335No Hit
AAACCAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA790.10732529072926857No Hit
TACGTGGGGGTAATACAAATGAATATAAAGTCACCTAATTCCTTTTCTAAAT790.10732529072926857No Hit
CTAGTAGGGCTCCTATATCATAGGGCCAGAGGAAGATCTTCCAAGGAAGATG790.10732529072926857No Hit
AAAAGTTTCCCCACATTGCCTAAATTTGAGCTCCATGAAATAAAGTGGATTT790.10732529072926857No Hit
ATCGTAGGGCGATCTGTAATTGGGGGTTTTGTTCATCTCCATTATCCAGAAA790.10732529072926857No Hit
GCACAAGGGAGGAAAAACTTGCAATAGAGGGAAAAGCCATTAAAGCAGCTCC790.10732529072926857No Hit
TACGGTAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC790.10732529072926857No Hit
CTCTCTGGGTATCCAAGTTAGTCCCCCTTATTCCACTGTGGCATTGCCGTTC780.10596674274535377No Hit
ATTGGGGGAAGGAAAAAAGGAAGTGTTTGGACGACAGCGAGCGGGAGAAGCG780.10596674274535377No Hit
AACAATCGGGGAGGCAGGAGAGGGAAAGGCAGCAGCGGCGGCAGCTGGAGGA780.10596674274535377No Hit
AGCTTAGGGATCGTGTGAGCACACCATATATTTACAGTAGGAATAGACGTAG780.10596674274535377No Hit
GAGTTGGGAGATTCTTAAAAGGACTCTGTGATATATTTATCGAATACCAACT770.10460819476143897No Hit
GTACTAGGGTCTGCCGGGCCGGGACTGTCGCGATCTGGAAGAGGCTCGCGGG770.10460819476143897No Hit
GGCTACGGGATAGTTACTGTCCTGTTGATTAATTTCTGCCATTTCATGTCCA770.10460819476143897No Hit
TTAAGTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA770.10460819476143897No Hit
CCCCGGGGGGATCGGCGGGGGGGACCCGCGGGGTGACCGGCGGCAGGAGCCG770.10460819476143897No Hit
GATTCCGGGCATTATATTAAAAGTATTACTGTCTGTCCTACCAGAATTGAAG770.10460819476143897No Hit
CACACAGGGACATTTCAAAAGTGAACTTGATTCAACCTGAGAAAACTGATTA760.10324964677752418No Hit
GTTTGCGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA760.10324964677752418No Hit
GCCTTTGGGGCAGCCTGCGGCCAGGCTTTTTTATTTAATGTAAATAGTTTTT760.10324964677752418No Hit
TCAAAGGGGGAGGAGGAGGCAGCTGCGGCGGCCGCGGTGGCCGCAGGCCTGG760.10324964677752418No Hit
TCGTAAAGGGTATTTTAATTTAGTTAATGAAGCAAAATTCAGTTTATATTTC760.10324964677752418No Hit
TGTATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAG750.10189109879360939No Hit
GACCTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA750.10189109879360939No Hit
GCGCAGGGAGAGTGACTCTGTCTCAACAAATAAACAAATACAAAATCTTCCC750.10189109879360939No Hit
AAAATAGGGGACTCGTGTCTCGCTACCAGCTCCCCGCTGCCCTGCGCTCGGC740.10053255080969462No Hit
AATAATGGGATATCACCTCCTTGAGAATCTCTCCCAGGCTGAAAATGTGATG740.10053255080969462No Hit
TTTGCTGGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTA740.10053255080969462No Hit
GCTAGTGGGAGGTAAGGGAATTAGAACCATTAGAATTGCTTTACAAAAATTG740.10053255080969462No Hit
GTATTTGGGTGAACTATCCTGCCCGCCATCATCCTAGTCCTCATCGCCCTCC740.10053255080969462No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)