FastQCFastQC Report
Sat 31 Dec 2022
SRR5847206.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847206.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72288
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGCCGTCT12731.7610115095174856No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGC11321.5659583886675519No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGG2370.32785524568393093No Hit
AGGGTAGGGTGTCCCATTCCCTGTATCAAAAGCAGGTAAAGACATTAAATGA1680.23240371845949537No Hit
ATCCGCGGGAAGTACCATTTTCTGATGAAAAGGAACCAGACCTGCCTGGAAA1600.22133687472332889No Hit
GAGCAGGGGATTGTGTGTTAAACAACACATCTCCCAGACACAGAAACACACT1560.21580345285524566No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGA1320.18260292164674632No Hit
TGGTTTGGGCGATTAAAGAGGGCATCATGCTACTCAGAACTTAAAATATATG1300.17983621071270475No Hit
CTTTGGGACAACAAATAACTTTTTCTTCATGGAACGTACATCCTAGTAGGGA1300.17983621071270475No Hit
CGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGT1270.17568614431164234No Hit
CAATATGGGTACCACCTCTCTTATTTATCTAATAGTGAGGCAAAGAAATGAA1240.1715360779105799No Hit
TATTCCGGGAAGCAATAATTTGTCCATAGCTTTAAAAAGGTGACATGCACCA1230.17015272244355908No Hit
GGTAGGGGTCTGTGAACATGTATGAAGATATCAACATTATCACTGGTGCACT1200.16600265604249667No Hit
ATTATCGGGAACAATATAGATTTGTGATTCTGCAATTTGTAGGGTCATTATA1110.15355245683930943No Hit
TACCTGGGGGATCCTCCCAGTCGGTGCAGCAAACTTCAGGGAAGCCATGCGC1090.15078574590526783No Hit
TTTCAAGGGGGAGTCCCCAGGGAATGAGCCTCAGGATCCACTTCGTCCCTTG1080.14940239043824702No Hit
ACACAAGGGACTGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTGCTG1060.1466356795042054No Hit
TGTCAAGGGAGAGAAAGAAGGTCCAGAAAAGAAGAAGACAAAAAAGGAAGCT1050.1452523240371846No Hit
GAGAAAGGGGTCTTTCCAAAGCGCTGAGGCTGTGCACCTATTCTGTAGTTGC1040.1438689685701638No Hit
AACGCTGGGAGGCTCCAAAAACTCTTTCACTCTCATTGCACTCTATCCAATG1040.1438689685701638No Hit
TTGCTAGGGAGGAAAGAATAGACCCATATGAAATCATTATAATGCAGTGTGG1000.13833554670208056No Hit
AACGCAGGGGGATGGAAACATTTTCTCACTTCCTTTTTTTCCCCTAGAGTCT990.13695219123505978No Hit
TATTCCGGGGATACCTCAACACAATAAAGGTTGTATATGACAAACCCACAGC990.13695219123505978No Hit
AATCAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA980.13556883576803896No Hit
CTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCCTGTCTCTTATAC980.13556883576803896No Hit
TTGCATGGAGGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGG970.13418548030101815No Hit
CCTGGGGAGCTGGGAACATGGCAGGTGAGCAGAGCTTGGTGCCTCTGCCGTG970.13418548030101815No Hit
TACATAGGGAATCTTACTTGGGTAGAGATGGCCTTTGCCAACAAAGTGAACT960.13280212483399734No Hit
TGTGCTGGGAGTGGGTAGGTGTCAAAATTCACTGTTCTCTTTTAATGGGCAC940.13003541389995574No Hit
GCACTTGGGATGCTTGCTTGATGGTTGGGTTGATTGGAGGTGAATGGAAGGA940.13003541389995574No Hit
ATTTACGGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACG930.12865205843293492No Hit
GTAGTTGGGCCTAAATAAATGAGCTGTTGGAAGAAAAGAATCACAGTACTTT930.12865205843293492No Hit
TCTACTGGGTGGTGTGACTACTCCACTTTCATATATCTGTTCATATCACTGA930.12865205843293492No Hit
TGACTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC920.12726870296591414No Hit
ATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGT910.1258853474988933No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGAACTCGTATGC910.1258853474988933No Hit
GTTTACGGGCCTTATGTCTTGCTGAGAAATGCATACCATGCTGTCTACAAAC900.12450199203187251No Hit
ATTCTAGGGGCATTCCTATTTCCCTAAGATCTACTAGTGATAATTCTACCTT900.12450199203187251No Hit
GAAAGCGGGGGGCAGTGGTGCTGGGAGTGTCGTGGACGCCGTGCCGTTACTC890.12311863656485171No Hit
TTAAACGGGGACCCTCTGGGGACAAGAGTCTGAGCCGAACACCAGAGACACT880.1217352810978309No Hit
GCTTCGGGGAACCCTCAGTCCACTTTGTTTATAGATTCGTCTGTTCTGCATA880.1217352810978309No Hit
ATGCTGGGATTACAAGTGTGAGCCACCGCGCCCGGCCCAGAATAAATTCCTT880.1217352810978309No Hit
TAGCACAGGGTGTTGGAGAGCGAGCAGTTCCTGACGGAGCTGACCAGACTTT880.1217352810978309No Hit
TTTCGTGGGACGGCGGGGAACCATGCCAGATGACCTTCTGACCACGTTGGAT870.1203519256308101No Hit
ATAGTCGGGCAGCAGTACCGGGCGCTCACGGTGCCCGAGCTCACCCAGCAGA870.1203519256308101No Hit
ATCATGGGGATTTGCACGCAATTGACTCTTTCAAAGTCTTTCAGTAGGTTAA860.1189685701637893No Hit
CCATTTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC860.1189685701637893No Hit
CAATTAGGGCAATTTTGATCTCAGTGTATAAAACTATCTTATTGATTTTTTA860.1189685701637893No Hit
GACCTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA850.11758521469676848No Hit
GCATGGGGATGTACGTGGGCAGAAGAGGCCGCTCAAGCTGTGTCCCCCCTGA850.11758521469676848No Hit
GCGCATCGGGGACAGATTAAAATTATTACAGTGTGAGAACATGTGCTTTTTA850.11758521469676848No Hit
CTAGTAGGGCTCCTATATCATAGGGCCAGAGGAAGATCTTCCAAGGAAGATG850.11758521469676848No Hit
CGCACAGGGGTCCTAGTGATTATAAAGTAAAACCACAGACCAATTTGCAAAT850.11758521469676848No Hit
ATGCGTGGGGGTGAAAGCAAAGCAGTCAGCCTCAAATAATTCAGGTGAGGGA850.11758521469676848No Hit
ATTACAGGGACTGCTTATTTGCACATTTATTCTCATTTTAAATAATAAATTA850.11758521469676848No Hit
CTTAAATTCCCAACAGCAGTCAAGTAAACAAAAGGGTTTATTTTTTATTAAT850.11758521469676848No Hit
TACGAGGGGTCTCTGAGTGAAGTTAACACCACGTATTTTACCTTTGCAAAAA850.11758521469676848No Hit
GTTGCGGGGAAGCACATGTGTTCATTGTGCGTATGTGTGTGCATGTGTGCGC850.11758521469676848No Hit
GCACAAGGGAGGAAAAACTTGCAATAGAGGGAAAAGCCATTAAAGCAGCTCC850.11758521469676848No Hit
AGTGCTGGGATTACAGGTGTGATCCACTGCACCCGGCCGGCATTATGATTTT840.11620185922974768No Hit
GTATTTGGGTGAACTATCCTGCCCGCCATCATCCTAGTCCTCATCGCCCTCC840.11620185922974768No Hit
GCCGTAGGGGGTGGCGGGGCCCGGCGGGGAGCGGGTCCGGAGCAGGCTCCCG830.11481850376272686No Hit
TATCAGGGGAATAATGAATTGATTTACTTTAGTGGTTTTTGAGTAAACTTCG830.11481850376272686No Hit
GTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGCC830.11481850376272686No Hit
AATAAAGGGATACAGGGAGATTCTGTGTGCTCTTTACCTAGTTTCCCCAAAT830.11481850376272686No Hit
AAAAGTTTCCCCACATTGCCTAAATTTGAGCTCCATGAAATAAAGTGGATTT830.11481850376272686No Hit
CTCTCTGGGTATCCAAGTTAGTCCCCCTTATTCCACTGTGGCATTGCCGTTC820.11343514829570607No Hit
GAGTTGGGAGATTCTTAAAAGGACTCTGTGATATATTTATCGAATACCAACT820.11343514829570607No Hit
TTTGCTGGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTA820.11343514829570607No Hit
CGACATGGGACTCTAACTATTGTTTCTTGGCCTGGCACTTTTTTATAGAATC820.11343514829570607No Hit
TAGTGCTGGGAGGTGATCACGTTTTAATGTCTAATATAAACAATGATTTAGG820.11343514829570607No Hit
CTATAGGGAGATCTGGTTGGCTTTTGTGGGCTGACCCAGACATTTAATCACC820.11343514829570607No Hit
GGGCTGGGATAGGAAGCCTAAAGTTAAAGAAGATATATCAGCTTTGGTGATT820.11343514829570607No Hit
GCAGGTGGGATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGCC820.11343514829570607No Hit
TTGACTTGGGGTTTCCTCGTTTGTATCATACACATTTATCTTACAATTCCAA810.11205179282868527No Hit
TTATCAGGGTCAGATGAATCCCCCAGATGTAATTTATATTGTAATGTTTTAC810.11205179282868527No Hit
TCAAAGGGGGAGGAGGAGGCAGCTGCGGCGGCCGCGGTGGCCGCAGGCCTGG810.11205179282868527No Hit
TGATGTGGGTATCGTGATGGCAAATATGACTTGGACTTCAAGTCTCCCACTG810.11205179282868527No Hit
TAGTAGCGGGAAGATGCTTATGAGCATGGAAATGTATTTAAAGTTTTTGCTT800.11066843736166444No Hit
GTTCAGGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCC800.11066843736166444No Hit
TTAAGTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA800.11066843736166444No Hit
ATGCGGGAAGAATTATAAACCCCAGAATGAGATGGAAATAAACAAGTATTTT800.11066843736166444No Hit
AAAGCCGGGACAAGTATTATGTGTCATTAAAAATAAATTTAAAAAATTCCCA800.11066843736166444No Hit
TTACGCGGGGAAATGAACTGTAGTAGGTGTGTAGTTTGGGGAAGTCAAATGG790.10928508189464366No Hit
ACAACAGGGAACAAAGATATTACTTGCTTCATAAGTTCCTGTCTTCTTGAAG790.10928508189464366No Hit
GCAGTGGGACTTCCGGCGTGTGCGTCTGGCGTCCGCGCGCTGCACAATGGCG790.10928508189464366No Hit
TCAGCTGGGGACAGATGTTGTCATATGAGCATGTGGGAAAATTTAGTAAAAT780.10790172642762283No Hit
GAAGGGGGATATCTAATGGTCACCAATGATGTTAAAGTGAAATTATAAATTA780.10790172642762283No Hit
TTTGCGGGTCTGGCTCAGGGATGGAGCTCAGGTCCACAGATGCATTACGAAA780.10790172642762283No Hit
CCGAAGGGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTA780.10790172642762283No Hit
GCTCATGGGCAAACAAACAAACAAAGAAAACAAACAGTCCTAGCTAACATGT780.10790172642762283No Hit
GTTACAGGGATGGACCTCACCTACGTCAGCCTGCTACTCCAGGAGTTCGGCT770.10651837096060203No Hit
AACAATCGGGGAGGCAGGAGAGGGAAAGGCAGCAGCGGCGGCAGCTGGAGGA770.10651837096060203No Hit
ATTGCAGGGAGGTGCGGGATGGACTTAAATGTCACACCAAACTCAAAGTAGG760.10513501549358124No Hit
ATTGGGGGAAGGAAAAAAGGAAGTGTTTGGACGACAGCGAGCGGGAGAAGCG760.10513501549358124No Hit
AGTGTTGGGGATACATTCCTAGAAACAGAGCTTGTAATTTTGTCTCAAAGGA760.10513501549358124No Hit
TTGAGGGGGGCGGGCCCCTCACCTGCACCCCACCTTCACCCAGCTCTGGGTT760.10513501549358124No Hit
CTCGGGATGGGTGGGAACAGAGCATTTCCAGCATTTGTTGTTGTTGTTTTAC760.10513501549358124No Hit
TCTATAGGGAAGGATGATTAGACATCTCACTACTACTACTGACTATCACACA760.10513501549358124No Hit
AATATGGGGTCACAAAAGGCAGTTTGTCTACTACAGCAGAAGGCTGGTTAAC760.10513501549358124No Hit
GCTCAAGGGGCAGAGAGCAGGAACTTGATGCAGTCATAAACCCAAGCAAGTA760.10513501549358124No Hit
GTTTATGGGGGGGCTCTTGTCCCGCCCCCACACCGCCTCCCAGCCAGTCCCA760.10513501549358124No Hit
CAGGCAGGGGAGGTGGGACTGACTGAGTCTTCCGTGTGTCGCCGCCGTTGCC760.10513501549358124No Hit
GCTATTGGGCAATACCACGGTGGCCGCCCTGGAGGACGAGCTGACGCAGCTA750.10375166002656042No Hit
GTTAACGGGCCAGATTGCAAATTCCATCCAACGCTTCAGAGGATGCTATTAT750.10375166002656042No Hit
TGGTCCGGAACTGCGGGCTGCAAGCTGGGCTCCCCCCTTACTCCCCAGTGTT750.10375166002656042No Hit
TCCAAGGGGAGAAGAGCAGCGTGAACAGGAAGCTAAGCATGAACGCATTGAA740.10236830455953962No Hit
AGAATAGGGGTACCCAGTTTATTAATTATCTTTTTACATTCTACAGATGTGT740.10236830455953962No Hit
CAACCTGGGGAGAGGCGGGCTCGGGCAAGCACTTTAACCTTTTAAGCCCAAC740.10236830455953962No Hit
TCTGCAGGGAACGTTGTCCTCCTCATTGGAATTCACTATGAGTCAGAATCAT740.10236830455953962No Hit
CTTGGTGGGATGTCTTTTGGCTCTCTCCTTCCTCTCCAGGGTGATGACAACT730.1009849490925188No Hit
GCATTTGGGTGGAAACTGCAATTTGAAAGCTGGCATACAGTTCTTGTTTATA730.1009849490925188No Hit
TCGTAAAGGGTATTTTAATTTAGTTAATGAAGCAAAATTCAGTTTATATTTC730.1009849490925188No Hit
GTTGGTGGGAAGCCAAAAGGATTCCTCTTTGTTTATCTCTGAGACAGTCCAA730.1009849490925188No Hit
TATAGCGGGGAAAGCAAGAGTTGAATTGCTAGCCATGAGGAAAACGTAAGCC730.1009849490925188No Hit
ATCGTAGGGCGATCTGTAATTGGGGGTTTTGTTCATCTCCATTATCCAGAAA730.1009849490925188No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)