FastQCFastQC Report
Sat 31 Dec 2022
SRR5847198.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847198.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences188793
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGCCGTCT26071.3808774689739556No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGC24921.319964193587686No Hit
TACACTCGGGATGCAGTATTAGATGGCAATAAGCCTCCTTGCAATAGCAGCT3110.16473068387069437No Hit
ACACTAGGGGATTGTTGATGATGCCACAGCAGGTTACTAAATTCTGCTCAGA2940.1557261127266371No Hit
ATGGCCGGGCTGAGGATTGTATTTCAGAACCACCAACTGCTCTTGACAATTG2870.15201834813790766No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGG2790.14778090289364543No Hit
AACTAGGGGGACGCCCTGTGGATGGCCACTCTGCCCATCAAGCTGCCGGTGG2780.14725122223811263No Hit
TGAGGTGGGATGAACATTTGGTACATGTGCCAGTTCAACTTATTCTTCATAA2780.14725122223811263No Hit
ACGATTGGGGCTGAAAAAATTCTTTGGAAACACCTCCCTCATCAACTCCTTG2630.13930601240512097No Hit
TACGTAGGGACTCTTGACACAGATAACTTCAGACTGATCTTCTGTCCAAGGA2600.1377169704385226No Hit
GATTCAGGATTAATAATATTGCTGGGGAATGGGGATGGCCTATGCAGGAATG2580.13665760912745706No Hit
TCGGACGGGAGCATTTGTAAGATGCTGCACAGGAGCAGCATTATCCCCAAAG2550.13506856716085872No Hit
CGACTAGGGCGGGATGGAGGAGAGAAGAGGGTAACATTTCAAAGGTGCCCTC2540.13453888650532594No Hit
CGGTGAGGGACACATGTATTTTCTCCATAAGGTATATCACAGCCATCTTGCA2520.1334795251942604No Hit
TTGCTTGGGATTCTAATCTGATTGATTCAAGTTTAAGTTGCTCATAATTTTT2490.13189048322766203No Hit
TCCGCTGGGGTGATACTGTTAGCATTCAAAACAAAGAACAAATTAGTAATGG2480.13136080257212926No Hit
TCGTACGGGCCAAACCCAAAATTGGTAACAGAAAAGAAATAATAGAGATCAG2470.1308311219165965No Hit
CCTGACCGGGCAATTGGAAACCATGTGAGAACAACGCTTCAAATGTATTAGA2440.12924207994999815No Hit
GTCCTAGGCAGACACGTAAGTCAATGGAATGGAGACGAGAGATTTCTACAAA2430.12871239929446537No Hit
CTATTTGGGACTTGGGACCAAAAAGAATGCATAACTTTCCAATTTCCTTTAA2430.12871239929446537No Hit
TTCAACGGGCTAATAGAAAAGTCATGGTTACATCAACTGGATACATACAGCC2400.12712335732786703No Hit
CACCTAGGGTCCATTATCAAAATTGACTGGGGATTAACACCGATGTTAGAGT2390.12659367667233423No Hit
GCAATAGGGATGAAAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTG2350.12447495405020312No Hit
CTACGAGGGCAAACTCCTGACCTCAGGTGATCCACCTGCTTTGGCCTCCCAG2340.12394527339467036No Hit
CAATACGGGTCAGGCGTGGAGGAACCATGGTAACCTATGGGGGGATGGCCAA2330.12341559273913758No Hit
CTAAATGGGAAGGAGAACTACAAACCACTGCTCAACGAAATAAAAGAGGACA2320.12288591208360479No Hit
AGTCACGGGGCCTGTGACCGGCTTGGCGGTTGGAGCGGCTGTCGCCATGTTG2310.12235623142807202No Hit
ACAGTGGGCCACGTGGGCAGCCTTCTGCTTATGACAATAATTGGCCCATTGC2300.12182655077253923No Hit
CCATAGGGGAGGAAAGGACGTTGAATTTGAAGTTGTTGGTGATGCCCCGGAA2300.12182655077253923No Hit
TCTGCCGGGGCCAGAGTGACATGCTCCTGGGAACACTATAGCATTCATAAAG2290.12129687011700645No Hit
GAACCAGGGGGTGGTACATGCCTGTAGTCCCAGATGTTCAGCAGACTGAGGT2280.12076718946147366No Hit
CGCAGGGGGTTCTGAACTCCCAGATCTGAGAAGGAACTAGTGTTGGTGGTAT2280.12076718946147366No Hit
TAAGTTGGGGTGCGCACATGCAGCTTTGCTTTCCTTAATACATTATCTGCTA2260.11970782815040812No Hit
TAAATAGGGAACAAAAAGAAAACAAACAAAGAACAATAAGAACACCAAGGAA2260.11970782815040812No Hit
TACATGGGGGCTGTTTTAATGGACAGATTTGAATGTGGCTTTCTTCTTATAG2230.11811878618380979No Hit
AATTGGGGGAGCCAGTGTGATGCTGCTTCCCAGACGGTTACTGGTCATCATT2230.11811878618380979No Hit
TGTCTAGGGGATTGCAAACACAATATATAGCTCAAGTTTACTTTGTACTCAA2220.117589105528277No Hit
CTTCAAGGATTACTGGATAGAATTCAGGCTTTCCCCTCCAGCCCCCAATCAT2210.11705942487274422No Hit
AGATTGGGGGGAGGCGGCGGCGGGCGCGCGGCGGCGGCGGGCGTGCGAGGCT2210.11705942487274422No Hit
AGCTTCGGGGTTGCTCGGGCAGCCCAGCAGCGGCGCGGCCGCCGAGCCCCTG2210.11705942487274422No Hit
TTGCATGGGAACTATAACATATTCATACAATGAGCTCTTACTGCTTATTTGC2200.11652974421721145No Hit
AGCGTAGGGGAACTGCTTTGAGGTGCCTTGGAACTGGCTTTGGAAATAGCTA2190.11600006356167866No Hit
GTGACTGGGTCCTCTCACCTCATTTTGTAAATGAAAAATCCCTAATTCAGTG2180.11547038290614588No Hit
ACCCGAGGGCACCCAGACACTCTGAGGGCTTTATGATCCATTGTGAGGGTTA2160.11441102159508033No Hit
TCAGCATGGGGATTCAGATCAACTGGTGTTGGAAGTTATGTAGAGATGTCAT2140.11335166028401476No Hit
CGTGGCGGGAGGCCTCTCTCCTGATACAGCAGGCGCTCACCATGTTCCCTGG2140.11335166028401476No Hit
TTGTTAGGGGTGGGGCTGCTTTTATCTCAAAGGTAACCCATCTACCCTGCTC2140.11335166028401476No Hit
GCCCGAGAGAATGTGTGGAAGTTCTTCACCATTTTCACTCCTATATTTTTCT2140.11335166028401476No Hit
TTTATAGGGATGGGGTTGGCATTGAATCTATAAATTACCTTGGGCAGTATGG2130.11282197962848199No Hit
CGGAGTGGGGACTCGGTGCTACTCACACACATTGGGGCAGACAACCTGCCAG2120.1122922989729492No Hit
GATGTTGGGATATGTTAGTTAGGACAAACGTATTTTGCTTTCCCATTAGCCT2120.1122922989729492No Hit
CGTTATGGGGTGTCCCAACAACGATATGAAAGAGCTTGTTGGATGAAGTCTT2120.1122922989729492No Hit
AGCTCAGGGTAATGGATAGAGACCTTGTACACAGACAGACGGCTAGTGCAGT2100.11123293766188366No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGA2100.11123293766188366No Hit
TTTTGCGGGGTTCTGGGCCCTCATCCCCTAGATCCAGGGACCCCAGCCCCAT2090.11070325700635088No Hit
ACACTAGGGATTCCATGAATGCTCCTGCTTCAGGGCCTCTGCATTTGCTGTT2080.11017357635081809No Hit
TAAAGAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC2080.11017357635081809No Hit
TTGCTTGGGATCGTCAAATCAAAGCCACCCTCAGTTTTTTGTATGGTGCCAT2080.11017357635081809No Hit
GCTTACGGGCAAATCAAGGATAAATATCTTACGCACGATATCTAGTGACAGA2070.1096438956952853No Hit
AACGCTGGGTACAGGAATCACAGCTCTCAATAGCATAGAGGGTGTTTATAGG2070.1096438956952853No Hit
GGCATGGGGGCCCCGCCGCCGTCGCCGCCATGACGGGGCTAGCACTGCTCTA2070.1096438956952853No Hit
TAGTTAGGGTACAACCCTTCGCTGACGCCATAAAACTCTTCACCAAAGAGCC2060.10911421503975254No Hit
CATGGCGGAGTTCATATTGACAAAGGCATGAAAGATGGCCAGAAGATAACAT2060.10911421503975254No Hit
AATTAAGGGTCTTGAGTTTCTTGTTAATGATGGAAGATCCACCTTTATTGGT2060.10911421503975254No Hit
TGTTGCGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA2050.10858453438421975No Hit
CGCAGTGGGCTGCTTACATAAGATGAAATAGATTTTAAGTCCAAACCTGTCA2050.10858453438421975No Hit
TGTCTAGGGGGGGATTAGAAAAATGAGGCACTGGCTACCAGTAACCTATATA2040.10805485372868696No Hit
GTAATAGGGGAAAGTAATTGACACTTTGGCATTGAATGAGGTTACAACAAAT2030.1075251730731542No Hit
TTGTGCGGGGAATGTGAAATGTTATGGGTAGTTTCTTATAAAATGACACGTG2020.10699549241762142No Hit
TAGTGCGGGGGCTGGAGTGGAGTGCAAATGGCTTGATCTCGGCTCACTGCAA2020.10699549241762142No Hit
GTCAGAGGGCCTCCCATAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCA2010.10646581176208864No Hit
ACACACGGGGTTATAATCTTGAACCTTAAACTTTCCAAGGATTGAGATTTCA2010.10646581176208864No Hit
GTTTATGGGATCCTGAGTTATTTTGGTTTCCCGTTATGTGAATATCCTTTTC2000.10593613110655585No Hit
CCTTTAGGGCTGCAGGGCGGGCAAGCAAGCTTACAGAAGCAGAACAAAGGCA2000.10593613110655585No Hit
GTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGATTTCCAAT2000.10593613110655585No Hit
TGTCGCTGGGTATGTAACTTTACTTATGTGGGACCAATGGCCAGTATATTCT1990.10540645045102309No Hit
AGAAATGGGTTATGGCTCTATTTTGTAAAACAAACTACTGGTAATTATTTTT1990.10540645045102309No Hit
TACATGGGGGAACAAAAATGTTTTTTTAAATTTTAAATAGTAAACATTTGAT1980.1048767697954903No Hit
AGCCTTGGGTGATCAAATGACAGTGAACAAAGCCAGCCCAAGCTGGTAAGGT1970.10434708913995752No Hit
TTTTGAGGGAAGATAAATCTTTTACTACACTGTAAACAATGGAGTGGTGGTA1960.10381740848442475No Hit
CAATTAGGGTTACTTCATTTGACAGGAGTATGTACAGAAAATTCAAGTTTTG1960.10381740848442475No Hit
AGTTTTGGGGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTT1950.10328772782889196No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGAACTCGTATGC1950.10328772782889196No Hit
TTTTTTGGGCCAGCTGCTGCAGCGCGCCTTCGCCGCCAAAGCATCCAGCAGC1950.10328772782889196No Hit
GCTTGGGAGGCTGAGGCGGGAGAATCGTTTGGGCCCGGGAGGCGGAGGTTTC1950.10328772782889196No Hit
GATGCCGGGAACGCATGTCTCTGCAGACAGATGAAGATGAACACAGTATTGA1940.10275804717335918No Hit
TCTTCAGGGCGCTCTTCCGATCTTATGCTGGGATGACAAGGTGAATTTCCAT1940.10275804717335918No Hit
GTTTTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1930.1022283665178264No Hit
TTGATAGGGTTTCCAGGGTGAAAATTGTAAACAGTTCTTCAGTGATGTTTCC1930.1022283665178264No Hit
ATATGAGGGGGTCTTTGGGGGTAGGCGGTAGTGGCGGAAGAGGTTCGGCGGC1930.1022283665178264No Hit
ATTCTAGGGGCAACCCAATATTTATTTCATAAAGTGTTATAAATATTGAGAA1920.10169868586229364No Hit
ATTCAAGGGATCCCTCTTACTGGTTTGTCTGTAATGAATGGTTAAAAATAAG1920.10169868586229364No Hit
GACGCAGGGGAGGTGACTATGTTTTTTAACTTTTATTTTAGGTTCAGGGGTA1920.10169868586229364No Hit
GCTCTAGGGAATCAATTCAAATTGGATCCCAAATACTGAAATGAATTTTTGG1910.10116900520676085No Hit
TGCTGTGGGACCTCCTTTATGAAGACCTTCATAAATTCTAGGATGGTGAATT1910.10116900520676085No Hit
TACGATAGGGGGCCAGGTTAGTGGCTTCTCAAGTGGAGACAAGTTTGACCCC1910.10116900520676085No Hit
AGACCGGGAGATAACAAGAATAAAAATTGAATTGGAGGAAGCCCTAGTCAAT1910.10116900520676085No Hit
TACTGTGGGGTTATATATGAAAGATTCGTAGTAATTGATAGGAAAATCTTAT1910.10116900520676085No Hit
TAAATAGGGTATCCTAAAGTGTGTCAGAATAACAAGTCAGAAATTTTAAAAC1900.10063932455122807No Hit
GACTTTGGGGGGTTGGCATGAGGAGGGGGAAGCTTTTTTGAATCGCTTTTTG1900.10063932455122807No Hit
ATAATAGGGCTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCG1900.10063932455122807No Hit
AGCAAGGGCCAAAGCAGAGGTCTGCAAGCCATATAGAGCATAGTTTGGTGCC1890.10010964389569528No Hit
TATTTAGGGAATTGGACATTTGATAGTTTCTACTTTGTGATTATTATGAATA1890.10010964389569528No Hit
TGTTTAGGGCTGGCATAGGGCAAGCAATTCTTCTGCCTCAGCCTCCCAAGTA1890.10010964389569528No Hit
CGCTTTGGGGGTTAGCTCATAGAATGCTAAGGATCATCTGACTTTTTTTTTT1890.10010964389569528No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)