FastQCFastQC Report
Sat 31 Dec 2022
SRR5847097.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847097.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104887
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACACAGCGAAATCTCGTATGC2900.27648802997511607No Hit
CTTATACACATCTCCGAGCCCACGAGACACAGCGAAATCTCGTATGCCGTCT2810.26790736697588835No Hit
GTTTCAGGCACTGGGAGAAGACGTTTGACATCGACTTGTCAGCCCCACAAAT1620.15445193398609933No Hit
TTAATGGGGTAATGATAAGATAGGAGTCTCAGTGATTTTTCTTAGTGTTTTT1610.15349852698618513No Hit
TTTACAGGGATTCTCAAAAGAAGACATTTATGCAGCCAAAATCACATGAAAA1560.14873149198661417No Hit
AACGTTGGGCAGCAGAAGAAGCACTTAACTATGGTTTTAGTGGAGTGATGCT1540.14682467798678578No Hit
TGTGCGGGGTACTGATGGGGGAAAAGAGTGGTTAGGGACATAGTTGACAGAT1500.143011049987129No Hit
AAATGCGGGCTTCAAATATTTTGCAGAGTTTGACTCTTTTCATAGACAAGTC1440.13729060798764384No Hit
GATCGTGGGGCCTTATTATCATAATTTTATTGATAATCACATTTAGACTAGG1430.13633720098772964No Hit
GTTGATGGGGCTGCATTAAATATCTTGTCAGATACTTTCAACATCTGATTCA1410.13443038698790127No Hit
ATAAATGGGATGGTACATAATTCTAAACTTTGCATTGATCATTAGTGAGAAT1410.13443038698790127No Hit
CATTGTAAAACTCCCACCTATGAGTGAGAACATGCGGTGTTTGGTTTTCTGT1410.13443038698790127No Hit
TAAACGGGGAACCATTTGAAATGCAAACTCTTGTATGACATATTTTGGAACT1400.13347697998798708No Hit
CAGAATGACCTTCCTTGGGAATTTATGGTCGATCGTCTTCCTACTGTCTTGT1390.13252357298807288No Hit
GTTTCAGGGAGGTAATTGAGGATTGCTTTACTTATTTGTCCAACTGGTGTGA1390.13252357298807288No Hit
CGTTCAGGGTATGATGAATCATACACTCTACAGTCCAAATCAGAAATCAGTT1380.13157016598815868No Hit
CAACATGGGGTTATTTAGCTTTGAAAAGAAATGAAATTCTGACACATGCTAC1370.13061675898824449No Hit
CTCGCTGGGGAAAAAGGTTTGATGGAGGAATTCACAGGTGACTGACAAGTCT1370.13061675898824449No Hit
CGTGTTGGGGTCTTGTCCCTGAGCAATCACTAATTAGCTTTGAGTCATTTAA1370.13061675898824449No Hit
GGTACTGGGCAACCATGATAGATAATGCCTTAACATGGATTTTAACGTTTGC1360.1296633519883303No Hit
TAGACACGGGACATATACCAATGAAGAGATATTCAGCATTTGTCTATTTGAT1360.1296633519883303No Hit
TACGGTGGGGACCTATTAAAATGGACAAAAGTGACAATCAGTTGATGATATG1340.12775653798850192No Hit
TACAATGGGTCTTATTTTAAGGATGAACAGACTGGGATTTATTTCTGAAATT1340.12775653798850192No Hit
GCACAAGGGGCATCTTTCTTAAAGTAATGCTTGGTATTTTTTTATTCAAAGG1330.12680313098858773No Hit
CGTCTTGGGCCAAGGTAAAAATCTGCATCTTTGCAGGCTACCATCAATATTG1330.12680313098858773No Hit
CGCTGCGGGCAAAAGCAAATGTTTCTATGTTGAGATAAAATGAACTACAATT1320.12584972398867353No Hit
AAAAGAGGGGCCGGCATCCCCACGAGCAAAGCATTAGTTTTTCCTCGCAGCT1320.12584972398867353No Hit
GACACTGGGAACAATGAAACTTTTTCAAAAAGAAAAAACAAAAACTTTAACT1320.12584972398867353No Hit
ATATGGGGGACCATAGCCGCTATGAGAAATTATATTTTGCTCTAGCAATGCT1310.12489631698875932No Hit
ATAATGGGGTTCACTAAGGAATGTTTTCAACAGTATCTTAGCAGGATTGTTT1310.12489631698875932No Hit
GCCATAACCCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCACAG1310.12489631698875932No Hit
CTGTCAGGGGACTTAATAATTTGGGCTACTATTTAGTAATTGCCCACCTTGT1300.12394290998884515No Hit
ACAAATGGGGGGAGTGCATGTGCAGGTTTGTTACATGGGTATCCTGCAACGT1300.12394290998884515No Hit
TAGCGGGGGCTGGTTTAGCACAAGCCATCCACATTAATTCAAACCTGTGGCT1300.12394290998884515No Hit
ATAGCCGGGGGCCTGACTTAGTCACCAAGAAGTGTATATCTTAGAGCACTTG1290.12298950298893095No Hit
CTTTGCGGGGCTCTGCAGGAGGAGAGGAAGGATGCAGTGGCCTTGTGCTCCA1280.12203609598901675No Hit
TTCTGAGGGCCCATTCTATACCAACACCTATTCTGATTTTTCGGTCACCCTG1280.12203609598901675No Hit
TAGCCTGGGTTTGTTGCTTTAGGTACGTGTTAGAAAGCACCCACATCAATTT1280.12203609598901675No Hit
ATAAGTGGGGGGAAGCTGTTGCAGGAAGAGGCAGAGGAAGAGGAAGAGGAAG1280.12203609598901675No Hit
GGCACCGGGAACAAATGTTGGCAAGGATATGGAGAAATTGGAAACCTTATGC1270.12108268898910256No Hit
TTATCCGGGGATTTGGGATTAACACCTGTGGGAATACATACATACACACGTA1270.12108268898910256No Hit
TTTGGTGGGAGGCAGAATCTGCCGGTATATTCATGTAATGCATTAATTTTAG1270.12108268898910256No Hit
ATCTTGGGGATCCTAATGAATGAAAAAAAAGTTCTAATTTTATCTCATAATA1270.12108268898910256No Hit
ACCAAAGGGCTGATTTGCTGCCCTGTCTTCTCTTACTTTACTTTATCAATAC1270.12108268898910256No Hit
CACACCGGGACAGAGAGCTGTGTCCAGTTACCCCTTATCTGAATCTCTGCAC1260.12012928198918836No Hit
TTAGCTGGGGATTAGCAGTTCTTCAGAAAGTTAAATAGAGTTACTATATGAC1260.12012928198918836No Hit
AAGTGCGGGAAGATAATTCCATTTACTATAAAATAATATAAAGAAAAGCCAG1260.12012928198918836No Hit
GCGCCTTATCAACCAAATTGTCTTGCCTATCTACCCCGTGGTGCCAAACCCA1250.11917587498927416No Hit
TGATTGGGGTGATCAAATACTGAACTGAAAAGGTAACTATAGAAATAAAGCT1250.11917587498927416No Hit
TCGACAGGGGATAGAGACCTTGTACACAGACAGACGGCTAGTGCAGTGGTAC1250.11917587498927416No Hit
TCACCACCTGGGCACTATTATCAAAAGTCAAAATATGACTCAAGTGTGAGTG1250.11917587498927416No Hit
CGCTTAGGGTCAGCATGGTTATTTTAAATCTGATAGCCACAATATCTGGAGT1250.11917587498927416No Hit
CATCCTGGGATATTCCTTTGGGAATATATAAATATAATGGGATTACTGAGTT1240.11822246798935997No Hit
CGCCGCGGGGCAGGCCGTAGGAGGAAGATGGCGGTGGAGTCGCGCGTTACCC1240.11822246798935997No Hit
TGTTTTGGGGATGGCCTCAAGTGTTGTGTATATTTGAAGTGAACCTTTCTGA1230.11726906098944577No Hit
TCGCAGGGGGCATCAACAAATTCAGAGCTCCTTTAAACGGGACTTCAATGGC1230.11726906098944577No Hit
TGTTCTGGGGGTCACTTAATTGAATGCCTTCAAGGGAAGGTATCGGCTAACA1230.11726906098944577No Hit
CATCAGGGTATTCAGAAGACTGTGTAATCATCCCCACTATTTAATCCCAGAA1230.11726906098944577No Hit
CTTCGCGGGACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATT1230.11726906098944577No Hit
CTTAAGGAGGCGTCTGATGCTAAATAATTCATCTTAATTAGATTAGTAACCT1220.1163156539895316No Hit
CAATCAGGGAATATATAAAAGGAATTATATACTGTGACAGAGTGGAACTCAA1220.1163156539895316No Hit
CAAAAACAGGGAAGGTTGGCTATGTTTCTTTCCTGCACCAAGCTATGTCTCT1210.1153622469896174No Hit
GAATGTGGGATTACAAGCCCTTTCAGATTTACATCTTGAAAGATGTATTTTT1210.1153622469896174No Hit
TACTCAGGGGTGAAAAACAGGATTAAGTCAGGTTGCTAAAGACCAATGCAAC1200.1144088399897032No Hit
TATGCTGGGACAGAGAGATGGTGTATCATAGAGGCTGTTGTCCCTCTGCCAG1200.1144088399897032No Hit
AAAAATGGGCGTTCATTAGTTGATGGACATGCAACTTGTTTCCACATTTTGA1200.1144088399897032No Hit
GCAACAGGGTATGTAACAGCTGGAAAGTTTATAGGCACCCACCTTTGGGACA1200.1144088399897032No Hit
ATTTCTGGGGCCTTTTGGCTCTCTGACCAGCACCATGGCGGTTGGCAAGAAC1200.1144088399897032No Hit
GCACACGGGGGAAATAATAAATATTGTCTTCTTCTTTTATTTTTTTCTTCCT1190.11345543298978901No Hit
CTAATAGGGCTTGGTAACGTCGTTTAAAATAGAATAGTCTGAACCAGTAGTT1190.11345543298978901No Hit
ATTCGAGGGATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTC1190.11345543298978901No Hit
TGCGTTGGGATAGATGATTCATAATTAATGCTATTGGCAGTTCCTCAATGAC1190.11345543298978901No Hit
TCACAGGGTGCTAAGGTAGCACAAAATCACAGGAATTTACCATAGGGTTTTG1180.11250202598987481No Hit
AACTAAGGGATGTGAAAATCTCCTAAAGTCAAAACCCCTGCCTTTGGTTTTA1180.11250202598987481No Hit
TCGACGGGGATTTCTTGTCATCAGCCAGACGAAATGGAGTAGCAAAAATCCA1180.11250202598987481No Hit
TACTGTGGGACATGCGTGCATGAATTTACTTCCAAGTAGTCAATATTTCTGC1180.11250202598987481No Hit
AAAAAAGGGGTGGGGGAAAGAATCTGATGCTTTGAAACATATATTTTTAATC1170.11154861898996062No Hit
CTATGTGGGCCACCGATCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1170.11154861898996062No Hit
TTGAGGGGGGAGGTCAAGGCTGCAGTGGGCCATGATCATGTCACTGCTCTCC1170.11154861898996062No Hit
GGTGCGGGATTTTTAAACCTTATCTTACATCTGTATGCTTTTTGTAGCACCT1160.11059521199004642No Hit
TAAAGGGGGTCTAGTTCTCAGAGCATTTGGAAAGGTTATCTTAAATGGCTAC1160.11059521199004642No Hit
GTCATTGGGGATAGAACCAGGTTCAGTTCTGGTCTCCGTAATTTCCTGGCTG1160.11059521199004642No Hit
TAAGAGGGGGTGCGGGCTTTTCTCGAGACAATGCCCCCTCCCAGAAAAATCT1160.11059521199004642No Hit
CATCGGGTCATGAACCAACATCTGCTGGCTTCAAACTTTTCTTCTGTAGCTT1160.11059521199004642No Hit
AAATCTGGGTATCTGGCCATGATGATGCCTTCTCACATTCCTGTCTAAGAAG1150.10964180499013222No Hit
GCGCCCGGGGGACCTTGGGGATTTTGGCTGTATTTCACTCTTTACTGGAGGG1150.10964180499013222No Hit
ATCAAGGGCTTGCAGTGAATTTGGTATTTGAGAATTTAGCTTGAATGTATGT1150.10964180499013222No Hit
CCTCATCGGGAATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTAC1150.10964180499013222No Hit
CGTTTTGGGAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAGAT1150.10964180499013222No Hit
GGTAGCGGGCTGCCGCTGATCCGATGCCAAGAGAACGGTCGTTGGGAGGCCC1150.10964180499013222No Hit
TAGTATGGGTAGATGAGAAAGAGAATCTCAGTGCAAAGAGGTCACGTATAGA1150.10964180499013222No Hit
GCTTTGGGGCTTATAGGTGATAGTGATAATTCCTGATTCCAAGAATGCCATC1140.10868839799021805No Hit
TCCTTGGGGGGACGGTAGAGGCCTCCCTTCCGAGGAGGCGGTGCTGGGGCGG1140.10868839799021805No Hit
CTGTTCGGGGGAGCTGTGTCCCTTGACAACAGGTCATGGTTCCTCTGAGGGA1140.10868839799021805No Hit
CTTGTCGGGATAGCATTTTACCCAGAGTAGAACTTCTTTCAAAATTGGAGTC1140.10868839799021805No Hit
GACATAGGGTAGAATTCAAAGACATAAGTCAATTGGTTAAAAGCTGTAAATA1140.10868839799021805No Hit
GGCTTGGGGGGGCAGGGGGTAACTTTACTGATTTGGGGGTGGTTTTTAGTTT1130.10773499099030386No Hit
GTAAAGCGGGGGTGTTCATCAATGGGCAAATGGATAAAGAAACTGTGATATA1130.10773499099030386No Hit
TGCAGCGGGACTATTAAAGATATAAGACATAAATACAGAAAATGAAAATATG1130.10773499099030386No Hit
ATAGCTGGGTTGCCAAGACGTCTAAGTAAAAACTTCTTCAAAGCCCTTAGTG1130.10773499099030386No Hit
CTTTTTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG1130.10773499099030386No Hit
CTGTCTGGGATCCAGGAACCTACAATGGCTATCTATTACCTTATTCTCTGGT1130.10773499099030386No Hit
ACATATGGGATGACCAAGTTGGTTTTATCCAAGAATACAAAGTTAACTTACC1130.10773499099030386No Hit
GCCGCTAGGGAGGGTCGTTAGATAATGGTTAATAAAATATAAGAGTTTGGAA1130.10773499099030386No Hit
TTGTGCGGGTCTTGTTGGGGGATGTATGATATTGTAGATTTCTCATGACAGC1130.10773499099030386No Hit
CGTCACGGGAAGGCGGCCAAATTTAAAGATCAGTCAATACAGTAGGGACCTG1130.10773499099030386No Hit
CCTAGCGGGATTCCATTGATCCTCAGTAGGACTTTTGCTATATTTACAGTCT1130.10773499099030386No Hit
ACCGACGGAGATCAGCCCAGCCACAAGACCCAGCACCATGGCAAGCCACGGA1130.10773499099030386No Hit
GCCGTAGGGGTCTTCGTGTGAGAACAGTAAACAGAGCTCATCAGTGTCCTCA1120.10678158399038966No Hit
ATTAAGGGGGTAATACTTGTGCGTCTGCTGTTAATGAGATCAAGTAATAATA1120.10678158399038966No Hit
AAACTAGGGACGTGGAGATAACCTCAGCTTGTCATGTGCTGAGAGAGCAGAT1120.10678158399038966No Hit
TTTGTTGGGTAATAAACAAGACATATATCTATTACCTAAGTTGACCCATAAA1120.10678158399038966No Hit
CACTGTGGGTACATCATGGGGGAAAAATATGGATAAATAGAGGAATTTGATT1120.10678158399038966No Hit
CGATGTGCATTGTTTTTGCCTACATTGGGATCCCTCTCTGGGCGCATTGTTG1120.10678158399038966No Hit
GATGAGGGCCAGTTATTCCGAAATCTGAAAAAATCTGAAACATGTCTGGGCC1120.10678158399038966No Hit
GGCACAGGGTAGGCTGGGGCAGAAGGTGGCATGGTCCTCAAGTGAGTTCTTA1120.10678158399038966No Hit
GGGGCTGGGACTGCTTTCCATAATAGTTGTACAAGTTTACATTCCTACCAGC1110.10582817699047546No Hit
TTACCGGGGATGCTGTGTTGCATGCTGTAAGAGACAGAAAGGTTAAAAAAAA1110.10582817699047546No Hit
GTTAACGGGCATGTTCACTAGTTAGATAGTGTTCTATCATGTTAATTTAGGC1110.10582817699047546No Hit
AAGCGAGGGAATGATGATGCTGCTCTAGGTATCATAATCAATTGTGCTTCTG1110.10582817699047546No Hit
TTATTAGGGGGAGGGCAGCGGGTCACCTCTTGTATTCCCACCTTAGTTTGGG1110.10582817699047546No Hit
GTAATTGGGATAATAAACAACCCTAAAATGAACTTATGAAAACTATTCAATT1110.10582817699047546No Hit
TGTATTGGGGATCCGGGGACCTGCAGGTTACAAGCAGCAGATCCCACCTTCA1110.10582817699047546No Hit
TGTCCTGGGTCTTCACTTTGAGCTTCAATGTAGAAATGTATTTTAGCCTCTG1110.10582817699047546No Hit
GTAAGCGGGATGGCCTGAGAGGAAACCACAAACTAGGATATTAGAATTAATT1110.10582817699047546No Hit
TTCAATGGGATCTTCTTAAATAATATATTTTTAAGCCCTCATTTATTTTTGG1100.10487476999056126No Hit
GCGAATGGGACCCTTCATCCAGCCCACTCTGGGAAGACTGCGAGAGTTGCAA1090.10392136299064707No Hit
ATGGCGGGATGTGACCAAATGTGTTTCAAAAATTGATGGTGTATTACCTGCT1090.10392136299064707No Hit
TCAGTGCGGGTGCTCAGGTCTGAGTATGGCTGGGAGTCGGGGGCCACAGGCC1090.10392136299064707No Hit
CTGTCCGGGGTATAAAATGAGAGCAAAGAGCAGGCAGGTGTGGAAAGCAAGG1090.10392136299064707No Hit
TAATGAGGGGATTTTTCTAAGAGCATTTCTGTCTCCATGCCAGACCTGTTTT1090.10392136299064707No Hit
TAAAAGGGGGAAAGACGGAAGCCAAACATTTTGAAATGAGGATGTTAGGATA1090.10392136299064707No Hit
GGCCCAAGATGTGAATAAGAGTGTAATGATTTCACTTATCACATAGTATTTC1080.10296795599073287No Hit
CCTAACGGGGTGAGTCTGTTTTCTCAAATGTAAGAGAGGGAGTTAGGCTAGA1080.10296795599073287No Hit
TGACGAGGGGTATGATTATGCTGGGAAAAACAAAGTTCCAGAGCTACAAAAG1080.10296795599073287No Hit
CAGGTGGGTGTTGCCAACTGAAGCACATGATGATTTTGTGGTCCTTTATGGT1080.10296795599073287No Hit
GAAAATGGGGAGTCCGGCGCGCAGAGGAGGAGGAGAAAGCTGACCGCTTAGG1080.10296795599073287No Hit
AATGCAGGGTATTGTTGAATTTCTAACTTTATGTGAAACGCCCTATCCAAAT1080.10296795599073287No Hit
CAGGTTGGGCGGACAAAAAAAATCAAGTGCGTGTGTGTCCTTGACCGTCTTC1080.10296795599073287No Hit
AAATGCGGGAGAGTCATTGAAAATGCAGGAAAATTGAAACGGCAGCAAAAGA1080.10296795599073287No Hit
GACCTGGGATGCTTTGAAAAGAATGAGGCCATACAGGCAGCCCATGATGCCG1070.1020145489908187No Hit
GCAAGAGGGAGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGCGT1070.1020145489908187No Hit
CGTAGTGGGGTTAAATAAAATTTCTGTTTATTGAACCTCTTTATTAAACCTC1070.1020145489908187No Hit
CGCGATGGGCGATCTCTCGGGCGGGCACATACAAATGTCTATGCAATACAAC1060.1010611419909045No Hit
AATACAGGGAGGCTGTGTCCTGCAAAGACAGAGGTGCAGAGCTGTTCAAGAC1060.1010611419909045No Hit
CAGAAGAGGGATGAACGGATAAGGTGTAAGTTAGAAAAGAGTAATTCAATGA1060.1010611419909045No Hit
ATGAGAGGCCGATCTTTCGGCTGGGATTCTCTAGGAACTCACTTTTGAGAGT1060.1010611419909045No Hit
ATGTTTGGGGTTATGGGACTGAAGTGGACTGGATGGACTCTACTTCAGAGGA1060.1010611419909045No Hit
TTTAATGGGCAGTGTGGTAAATGTGTCCCTTTTGAAACACTGTTCTGGGGAC1060.1010611419909045No Hit
GCCCATGGGCAGTTCTTTTGATCTTTTTAATCAGTTTCTCCATTGGACATTT1050.10010773499099031No Hit
TGTCAGGGGGGAGGCGGCGATCCCCGAAGGCGAGCTGAAATACGGCTGCAGG1050.10010773499099031No Hit
CTAACAGGGGGCTGGACAGCAAACATGGAGAGAATCATGAAAGCTCAAGCCC1050.10010773499099031No Hit
ACTAAAGGGATATTATAAGACTCTCCAGAATTGCTTCAGAGGCTCTCAAACA1050.10010773499099031No Hit
CTGCAGGGGGCTCTTAAGGAGAGTCTAGTAACAGTAACACTTTCTGGCCATT1050.10010773499099031No Hit
TCCATAGGGTAGCTATTTTAAATTTATTTCATATAATCTACTAAATAGAATC1050.10010773499099031No Hit
AAGTGCAGGGGGGCACAGCTTCAGCAGACCTAAACGTCCCTGCCTGACAGTT1050.10010773499099031No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)