FastQCFastQC Report
Sat 31 Dec 2022
SRR5847095.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847095.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102729
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACACAGCGAAATCTCGTATGC2750.26769461398436667No Hit
CTTATACACATCTCCGAGCCCACGAGACACAGCGAAATCTCGTATGCCGTCT2560.24919934974544675No Hit
TTAATGGGGTAATGATAAGATAGGAGTCTCAGTGATTTTTCTTAGTGTTTTT1740.16937768303010833No Hit
TACAATGGGTCTTATTTTAAGGATGAACAGACTGGGATTTATTTCTGAAATT1670.16256363831050627No Hit
AAAAGAGGGGCCGGCATCCCCACGAGCAAAGCATTAGTTTTTCCTCGCAGCT1520.14796211391135902No Hit
TAGCCTGGGTTTGTTGCTTTAGGTACGTGTTAGAAAGCACCCACATCAATTT1480.1440683740715864No Hit
TTTACAGGGATTCTCAAAAGAAGACATTTATGCAGCCAAAATCACATGAAAA1470.14309493911164325No Hit
AACGTTGGGCAGCAGAAGAAGCACTTAACTATGGTTTTAGTGGAGTGATGCT1470.14309493911164325No Hit
CTTAAGGAGGCGTCTGATGCTAAATAATTCATCTTAATTAGATTAGTAACCT1440.1401746342318138No Hit
TAAACGGGGAACCATTTGAAATGCAAACTCTTGTATGACATATTTTGGAACT1440.1401746342318138No Hit
ATAAGTGGGGGGAAGCTGTTGCAGGAAGAGGCAGAGGAAGAGGAAGAGGAAG1430.13920119927187066No Hit
TGTGCGGGGTACTGATGGGGGAAAAGAGTGGTTAGGGACATAGTTGACAGAT1420.1382277643119275No Hit
ACCAAAGGGCTGATTTGCTGCCCTGTCTTCTCTTACTTTACTTTATCAATAC1420.1382277643119275No Hit
CTTTGCGGGGCTCTGCAGGAGGAGAGGAAGGATGCAGTGGCCTTGTGCTCCA1380.1343340244721549No Hit
TAATGAGGGGATTTTTCTAAGAGCATTTCTGTCTCCATGCCAGACCTGTTTT1360.1323871545522686No Hit
AAAAATGGGCGTTCATTAGTTGATGGACATGCAACTTGTTTCCACATTTTGA1360.1323871545522686No Hit
CATCGGGTCATGAACCAACATCTGCTGGCTTCAAACTTTTCTTCTGTAGCTT1350.13141371959232542No Hit
GTTTCAGGCACTGGGAGAAGACGTTTGACATCGACTTGTCAGCCCCACAAAT1340.1304402846323823No Hit
GGGTAAGGGCTTGGGAATGATTGCATCTATTTGTTGTCATGTGGAATAGACA1340.1304402846323823No Hit
TCACCACCTGGGCACTATTATCAAAAGTCAAAATATGACTCAAGTGTGAGTG1330.12946684967243913No Hit
GCACAAGGGGCATCTTTCTTAAAGTAATGCTTGGTATTTTTTTATTCAAAGG1330.12946684967243913No Hit
TAGCGGGGGCTGGTTTAGCACAAGCCATCCACATTAATTCAAACCTGTGGCT1330.12946684967243913No Hit
CGTTTTGGGAGATGTGTCAATGGACGTGAAGCCTTCCTGGACCACCAGAGAT1310.12751997975255283No Hit
TGCGTTGGGATAGATGATTCATAATTAATGCTATTGGCAGTTCCTCAATGAC1310.12751997975255283No Hit
TGTCCTGGGTCTTCACTTTGAGCTTCAATGTAGAAATGTATTTTAGCCTCTG1310.12751997975255283No Hit
TTTGGTGGGAGGCAGAATCTGCCGGTATATTCATGTAATGCATTAATTTTAG1310.12751997975255283No Hit
GCACACGGGGGAAATAATAAATATTGTCTTCTTCTTTTATTTTTTTCTTCCT1300.12654654479260968No Hit
GGTGCGGGATTTTTAAACCTTATCTTACATCTGTATGCTTTTTGTAGCACCT1300.12654654479260968No Hit
ACAAATGGGGGGAGTGCATGTGCAGGTTTGTTACATGGGTATCCTGCAACGT1300.12654654479260968No Hit
AACTAAGGGATGTGAAAATCTCCTAAAGTCAAAACCCCTGCCTTTGGTTTTA1300.12654654479260968No Hit
GCAAGAGGGAGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGCGT1280.12459967487272337No Hit
ATGAGAGGCCGATCTTTCGGCTGGGATTCTCTAGGAACTCACTTTTGAGAGT1280.12459967487272337No Hit
ACAGCGGGATGTTCCATAACCTCAGTTCTTCTCCTTCTCAGGTTGAAGAATT1270.12362623991278024No Hit
CTCGCTGGGGAAAAAGGTTTGATGGAGGAATTCACAGGTGACTGACAAGTCT1270.12362623991278024No Hit
TCGACAGGGGATAGAGACCTTGTACACAGACAGACGGCTAGTGCAGTGGTAC1260.12265280495283708No Hit
CACTGTGGGTACATCATGGGGGAAAAATATGGATAAATAGAGGAATTTGATT1260.12265280495283708No Hit
GCAGCTGGGGGAGTAACTGAACACAAAGTTTCAAAGGGATGCATGCAATTCA1260.12265280495283708No Hit
TGAAAGGGGACAGTTGCCAAGAGCAGCTCCGCGCCTGCTGGATCGTGGATGC1260.12265280495283708No Hit
TTGAGGGGGGAGGTCAAGGCTGCAGTGGGCCATGATCATGTCACTGCTCTCC1250.12167936999289393No Hit
GGCGTGGGGTACTATATACCCACAAAAATTAAGAAGTAAAAGAAGAATGGTC1250.12167936999289393No Hit
AAGTGCGGGAAGATAATTCCATTTACTATAAAATAATATAAAGAAAAGCCAG1250.12167936999289393No Hit
CGCTTAGGGGAACAAAGACAGACAACTAATAGGAATGAAAACTAGGGTAGCG1240.12070593503295077No Hit
CGTGTTGGGGTCTTGTCCCTGAGCAATCACTAATTAGCTTTGAGTCATTTAA1230.11973250007300763No Hit
TAGACACGGGACATATACCAATGAAGAGATATTCAGCATTTGTCTATTTGAT1220.11875906511306447No Hit
TGATTGGGGTGATCAAATACTGAACTGAAAAGGTAACTATAGAAATAAAGCT1220.11875906511306447No Hit
ATAGCCGGGGGCCTGACTTAGTCACCAAGAAGTGTATATCTTAGAGCACTTG1220.11875906511306447No Hit
GTAAAGCGGGGGTGTTCATCAATGGGCAAATGGATAAAGAAACTGTGATATA1220.11875906511306447No Hit
TTCTGAGGGCCCATTCTATACCAACACCTATTCTGATTTTTCGGTCACCCTG1220.11875906511306447No Hit
CTTGATGCGGGGTGGAAGGTCTTCTAAATGCTCTCAGGTACACAACAAAACA1210.11778563015312131No Hit
ATAGCTGGGTTGCCAAGACGTCTAAGTAAAAACTTCTTCAAAGCCCTTAGTG1200.11681219519317818No Hit
CGTCTTGGGCCAAGGTAAAAATCTGCATCTTTGCAGGCTACCATCAATATTG1200.11681219519317818No Hit
GCGCCCGGGGGACCTTGGGGATTTTGGCTGTATTTCACTCTTTACTGGAGGG1200.11681219519317818No Hit
GGCACCGGGAACAAATGTTGGCAAGGATATGGAGAAATTGGAAACCTTATGC1200.11681219519317818No Hit
GTTAACGGGCATGTTCACTAGTTAGATAGTGTTCTATCATGTTAATTTAGGC1200.11681219519317818No Hit
ATCTTGGGGATCCTAATGAATGAAAAAAAAGTTCTAATTTTATCTCATAATA1200.11681219519317818No Hit
CTAACAGGGGGCTGGACAGCAAACATGGAGAGAATCATGAAAGCTCAAGCCC1190.11583876023323501No Hit
TTGTGCGGGTCTTGTTGGGGGATGTATGATATTGTAGATTTCTCATGACAGC1190.11583876023323501No Hit
GAATGTGGGATTACAAGCCCTTTCAGATTTACATCTTGAAAGATGTATTTTT1180.11486532527329187No Hit
TGCCATGGGACCACTTTGCTAATCAACCCATGAACAAAAAAGTGTCTTGATG1180.11486532527329187No Hit
GCTGTGGGGTCTGCTGAGATTATTTTTAAGAACCAGGTTGAAGCCTCTATGC1180.11486532527329187No Hit
TACTGTGGGACATGCGTGCATGAATTTACTTCCAAGTAGTCAATATTTCTGC1180.11486532527329187No Hit
TGTATTGGGGATCCGGGGACCTGCAGGTTACAAGCAGCAGATCCCACCTTCA1170.1138918903133487No Hit
TACTCAGGGGTGAAAAACAGGATTAAGTCAGGTTGCTAAAGACCAATGCAAC1170.1138918903133487No Hit
ATCAAGGGCTTGCAGTGAATTTGGTATTTGAGAATTTAGCTTGAATGTATGT1170.1138918903133487No Hit
CAGAAGAGGGATGAACGGATAAGGTGTAAGTTAGAAAAGAGTAATTCAATGA1170.1138918903133487No Hit
ATAAATGGGATGGTACATAATTCTAAACTTTGCATTGATCATTAGTGAGAAT1170.1138918903133487No Hit
ATTAAGGGGGTAATACTTGTGCGTCTGCTGTTAATGAGATCAAGTAATAATA1150.11194502039346241No Hit
TAAAAGGGGGAAAGACGGAAGCCAAACATTTTGAAATGAGGATGTTAGGATA1150.11194502039346241No Hit
ACTACTTTTGGATCGGTGCTGTCTAACAGAAATATACTGCAATACACATACA1150.11194502039346241No Hit
TAGTGAGGGAGATTCTAGGTGGAGATAAAATCCTGACAGCTGTATAGTTTCA1150.11194502039346241No Hit
GACATAGGGTAGAATTCAAAGACATAAGTCAATTGGTTAAAAGCTGTAAATA1150.11194502039346241No Hit
GAACAAGGGTGCCAAAGATACTATGAATGTTCTGAGTTTTGTTGCTGTTGTT1150.11194502039346241No Hit
GTTGATGGGGCTGCATTAAATATCTTGTCAGATACTTTCAACATCTGATTCA1140.11097158543351927No Hit
CTAATAGGGCTTGGTAACGTCGTTTAAAATAGAATAGTCTGAACCAGTAGTT1140.11097158543351927No Hit
TACGGTGGGGACCTATTAAAATGGACAAAAGTGACAATCAGTTGATGATATG1140.11097158543351927No Hit
GATTCTTTTTCAAGTTTCCCTAGTAACAGGTTTGGGGACGGGGTGGGAAGAA1140.11097158543351927No Hit
TCCAAAGGGAAGTGTGCATAAAATTTTAATTGTGTCTTGGGTGGCATCTAAT1140.11097158543351927No Hit
GATTCCGGGCGATCTAACCGAGGGATTGGTGAGTTCATTTACTGGTGTACGG1140.11097158543351927No Hit
ACCGACGGAGATCAGCCCAGCCACAAGACCCAGCACCATGGCAAGCCACGGA1140.11097158543351927No Hit
CAGAATGACCTTCCTTGGGAATTTATGGTCGATCGTCTTCCTACTGTCTTGT1130.10999815047357611No Hit
GTTCATGGGATGGATTTATGTACTGCAAATCATTGTTTTGTAATACATTCTC1120.10902471551363295No Hit
CGATGTGCATTGTTTTTGCCTACATTGGGATCCCTCTCTGGGCGCATTGTTG1120.10902471551363295No Hit
AGACCCGGGACATGTGGGACAAATACTTTTGTCCTCATGGATGGCTTGATAA1120.10902471551363295No Hit
TTTGTTGGGTAATAAACAAGACATATATCTATTACCTAAGTTGACCCATAAA1120.10902471551363295No Hit
CAACATGGGGTTATTTAGCTTTGAAAAGAAATGAAATTCTGACACATGCTAC1120.10902471551363295No Hit
TCGCAGGGGGCATCAACAAATTCAGAGCTCCTTTAAACGGGACTTCAATGGC1120.10902471551363295No Hit
AATCATGGGTCCGATCTGGCTAGGGGTAGCTTTTATCAAAGACGGCTGCAGC1110.10805128055368982No Hit
TACGCTGGGATTGATTTAGGTTTGTCTTAACCAATGTTCTTTTTTTAGAATT1110.10805128055368982No Hit
CTATGTGGGCCACCGATCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1110.10805128055368982No Hit
AAATCTGGGTATCTGGCCATGATGATGCCTTCTCACATTCCTGTCTAAGAAG1110.10805128055368982No Hit
TCACAGGGTGCTAAGGTAGCACAAAATCACAGGAATTTACCATAGGGTTTTG1110.10805128055368982No Hit
CGCTGCGGGCAAAAGCAAATGTTTCTATGTTGAGATAAAATGAACTACAATT1110.10805128055368982No Hit
CGCGATGGGCGATCTCTCGGGCGGGCACATACAAATGTCTATGCAATACAAC1110.10805128055368982No Hit
GCGTGCGGGGAAGGTAAGACAAAGAGATAAAAGGCAGAAAGATTGGAAAGAA1110.10805128055368982No Hit
AAATGCGGGCTTCAAATATTTTGCAGAGTTTGACTCTTTTCATAGACAAGTC1110.10805128055368982No Hit
CTGTCAGGGGACTTAATAATTTGGGCTACTATTTAGTAATTGCCCACCTTGT1110.10805128055368982No Hit
GTTTATGGGTTGTGTTGGGAATTTTAATTTCACTTTCTAATAGATTTTGTGA1110.10805128055368982No Hit
CGTCACGGGAAGGCGGCCAAATTTAAAGATCAGTCAATACAGTAGGGACCTG1110.10805128055368982No Hit
TAGCATGGGGATAGTGCCCAAGTGCAATGGCTCCCTAATCAAAGTAAACTAT1110.10805128055368982No Hit
GCAACAGGGTATGTAACAGCTGGAAAGTTTATAGGCACCCACCTTTGGGACA1110.10805128055368982No Hit
TCAAATGGGAGAGTAGTGGTATTAGTATAAAGATAACTTTTTAAATACCTTT1100.10707784559374665No Hit
CTGTCTGGGATCCAGGAACCTACAATGGCTATCTATTACCTTATTCTCTGGT1100.10707784559374665No Hit
CACATAGGGTTGAAGAAGAAGGAGAAAAGCCAAATACCAGAGACCAGACAAG1100.10707784559374665No Hit
TGTTTTGGGGATGGCCTCAAGTGTTGTGTATATTTGAAGTGAACCTTTCTGA1090.1061044106338035No Hit
GATGAGGGCCAGTTATTCCGAAATCTGAAAAAATCTGAAACATGTCTGGGCC1090.1061044106338035No Hit
CAAAGGGGTATCGAGGGGTGAAGAGAAATGATCTGAAGTACAATATGTGAAG1090.1061044106338035No Hit
GGCACAGGGTAGGCTGGGGCAGAAGGTGGCATGGTCCTCAAGTGAGTTCTTA1090.1061044106338035No Hit
GCTGCGGGGGTAAGGAACAATATAAAATCAGTTTAAAGATCTTTAAAGGTAG1090.1061044106338035No Hit
TTGTAGGGGATATTGACCAATGGCCTCTGAAAAAGCACATTTTAGATACTGA1090.1061044106338035No Hit
CTTAAGGGCATTCATTCATTCATTCACAAAATATTTATGATGTATTTACTCT1080.10513097567386034No Hit
CATAAGGGGGAATTGTATCTGTTTCCTTGCTAATGTGTCTTGTTATTTTGTC1080.10513097567386034No Hit
GGCAATGGGATCGCAGCACTATTCCCAATAGCAAAGGCATAGAATCAATCTA1080.10513097567386034No Hit
TCAGCCGGGTATCACTGCTATGCACATTGTAGATAACCAGTGAACATTTTTT1080.10513097567386034No Hit
TCGACGGGGATTTCTTGTCATCAGCCAGACGAAATGGAGTAGCAAAAATCCA1080.10513097567386034No Hit
TGGAGGGGCCACAGCATCAGTGAGTGAAGGTGGGGGACTGCAGGGCATCAGC1080.10513097567386034No Hit
CCTCGCGGGGATCCTGCTGGTCTCAGCACTATTTAATTCCCTTAAATATGTG1080.10513097567386034No Hit
TCTATTGGGGACGCTCTTCCGATCTTGAACAGGGGGATATTGGCCACTCTTT1080.10513097567386034No Hit
ATTCCAGGGACAAAGAAACAGATAAACATATTTTGCTTTAGTCTGGAAAGGA1070.10415754071391721No Hit
GGTAGCGGGCTGCCGCTGATCCGATGCCAAGAGAACGGTCGTTGGGAGGCCC1070.10415754071391721No Hit
CTTAGTAGGGGAGAAAATGGATGGCTGAACTTTCAAACATTTGGTAAATATT1070.10415754071391721No Hit
CTTATTGGGAGAGTTTGGGCCTTTTGGAACTTTGAGCGAAATATTACTCACT1070.10415754071391721No Hit
ACATATGGGATGACCAAGTTGGTTTTATCCAAGAATACAAAGTTAACTTACC1070.10415754071391721No Hit
ATACGCGGGTGGAAGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCC1070.10415754071391721No Hit
TTAATCGGGATGGCACTGCATTAAACGTGTGGTGTTTCTAGTCAATGATATT1070.10415754071391721No Hit
ATGGCGGGATGTGACCAAATGTGTTTCAAAAATTGATGGTGTATTACCTGCT1060.10318410575397405No Hit
AAAAAAGGGGTGGGGGAAAGAATCTGATGCTTTGAAACATATATTTTTAATC1060.10318410575397405No Hit
GAAGTTGGGGTGAGCGGCCTCCATGGACAGTGGCTACAAAGAGAGATCCCCC1060.10318410575397405No Hit
GATGCAGGGGGGGCCTTGATAACACAGAGTTTCAAGGTGAACCACCCTCTTT1060.10318410575397405No Hit
ATGCTGGGAATACGGCCATGAGCCAGCACACCTGGCCCAGAGATGATTCTTT1060.10318410575397405No Hit
CAAAAACAGGGAAGGTTGGCTATGTTTCTTTCCTGCACCAAGCTATGTCTCT1050.10221067079403089No Hit
GACTAGGGGAGGCGCTTCGCTGGTGCAGGTAAGCTCCGCACACTCTCGGCCG1050.10221067079403089No Hit
TGTTCTGGGGGTCACTTAATTGAATGCCTTCAAGGGAAGGTATCGGCTAACA1050.10221067079403089No Hit
AATACAGGGAGGCTGTGTCCTGCAAAGACAGAGGTGCAGAGCTGTTCAAGAC1050.10221067079403089No Hit
AAATGCGGGAGAGTCATTGAAAATGCAGGAAAATTGAAACGGCAGCAAAAGA1050.10221067079403089No Hit
GCTTGTGGGGCTTTCTTGACATTTCCATGACTGTTTCACATACAAACTATTG1050.10221067079403089No Hit
CAAAAGGGGACCTGGTTTGGAGATTTGACCCTATAGTATGTAGTTTAGGCAA1050.10221067079403089No Hit
GCCATAACCCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCACAG1050.10221067079403089No Hit
GCCTTGGGGGTAATTATTTAGATATTTCTGAAATATTTAGCAAATACTCGTG1040.10123723583408775No Hit
TTTAATGGGCAGTGTGGTAAATGTGTCCCTTTTGAAACACTGTTCTGGGGAC1040.10123723583408775No Hit
CTTCGCGGGACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATT1040.10123723583408775No Hit
ACAATCGGGTAATCGTACATTTTGCTAGACTCATTACTTGTCTCATTTTGTG1040.10123723583408775No Hit
TTATCCGGGGATTTGGGATTAACACCTGTGGGAATACATACATACACACGTA1040.10123723583408775No Hit
CCTAACGGGGTGAGTCTGTTTTCTCAAATGTAAGAGAGGGAGTTAGGCTAGA1030.10026380087414459No Hit
TTACCGGGGATGCTGTGTTGCATGCTGTAAGAGACAGAAAGGTTAAAAAAAA1030.10026380087414459No Hit
CTTGTCGGGATAGCATTTTACCCAGAGTAGAACTTCTTTCAAAATTGGAGTC1030.10026380087414459No Hit
TAAGAGGGGGTGCGGGCTTTTCTCGAGACAATGCCCCCTCCCAGAAAAATCT1030.10026380087414459No Hit
AAAGAAGGGAAGGGATAAAACTATAAAAATGTGGGAAGTGCAAACTGGGTAA1030.10026380087414459No Hit
TGGGTAGGGTGATTTAAAACTCTTTGATATTTGGGTCAATTACATTGCAGCA1030.10026380087414459No Hit
CGTTCTGGGGAAAAACAGACCAACAATCCTGGTATCAGACTGTTTCAGTATG1030.10026380087414459No Hit
CGTATTGGGGCAGTGGGCAAGTCGAAGAACCAGGAGAGGTGATAATGTAGTT1030.10026380087414459No Hit
GTTGCGGGGCCCCCGACCCCCCAACGGGCCCTGGTGTGTGTTGTTTCCCTCC1030.10026380087414459No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)